Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.23■□□□□ 0.519e-7■■■□□ 15.7
LARP4Q71RC2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.76■□□□□ 0.279e-7■■■□□ 15.7
LARP4Q71RC2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.31■□□□□ 0.049e-7■■■□□ 15.7
LARP4Q71RC2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.42□□□□□ -0.429e-7■■■□□ 15.7
LARP4Q71RC2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.246e-7■■■□□ 15.7
LARP4Q71RC2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.631e-6■■■□□ 15.7
LARP4Q71RC2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.2■□□□□ 0.181e-6■■■□□ 15.7
LARP4Q71RC2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.94■□□□□ 0.141e-6■■■□□ 15.7
LARP4Q71RC2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.081e-6■■■□□ 15.7
LARP4Q71RC2 RNPS1-213ENST00000565243 3337 ntTSL 212.13□□□□□ -0.471e-6■■■□□ 15.7
LARP4Q71RC2 PHF5A-202ENST00000459687 504 ntTSL 35.76□□□□□ -1.491e-6■■■□□ 15.7
LARP4Q71RC2 CALR-204ENST00000586967 394 ntTSL 214.05□□□□□ -0.162e-53■■■□□ 15.6
LARP4Q71RC2 AC024267.1-201ENST00000582320 895 ntBASIC15.39■□□□□ 0.056e-8■■■□□ 15.6
LARP4Q71RC2 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.31e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.481e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.531e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.671e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-210ENST00000489769 1562 ntTSL 1 (best)10.73□□□□□ -0.691e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.81e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.011e-323■■■□□ 15.6
LARP4Q71RC2 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.041e-323■■■□□ 15.6
LARP4Q71RC2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.832e-7■■■□□ 15.6
LARP4Q71RC2 SRM-206ENST00000490101 461 ntTSL 217.37■□□□□ 0.372e-7■■■□□ 15.6
LARP4Q71RC2 RPL18-212ENST00000551749 2091 ntTSL 217.35■□□□□ 0.373e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-213ENST00000552347 1645 ntTSL 516.89■□□□□ 0.293e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.62■□□□□ 0.093e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.093e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.62■□□□□ 0.093e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-206ENST00000549370 628 ntTSL 514.91□□□□□ -0.023e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-204ENST00000547897 440 ntTSL 513.17□□□□□ -0.33e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-215ENST00000552705 1081 ntTSL 212.26□□□□□ -0.453e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-203ENST00000547892 3844 nt11.89□□□□□ -0.513e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-210ENST00000550671 764 ntTSL 211.88□□□□□ -0.513e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC11.81□□□□□ -0.523e-22■■■□□ 15.6
LARP4Q71RC2 RPL18-216ENST00000552851 691 ntTSL 510.96□□□□□ -0.653e-22■■■□□ 15.6
LARP4Q71RC2 PACSIN3-209ENST00000532457 1845 ntTSL 521.22■□□□□ 0.997e-8■■■□□ 15.6
LARP4Q71RC2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.87e-8■■■□□ 15.6
LARP4Q71RC2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.797e-8■■■□□ 15.6
LARP4Q71RC2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.36■■□□□ 1.171e-6■■■□□ 15.6
LARP4Q71RC2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.091e-6■■■□□ 15.6
LARP4Q71RC2 CDIPT-205ENST00000563893 2253 ntTSL 520.61■□□□□ 0.891e-6■■■□□ 15.6
LARP4Q71RC2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.241e-6■■■□□ 15.6
LARP4Q71RC2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.922e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-203ENST00000372121 848 ntTSL 514.74□□□□□ -0.052e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-206ENST00000420568 1256 ntTSL 514.74□□□□□ -0.052e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-209ENST00000468915 1597 ntTSL 514.14□□□□□ -0.152e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.01□□□□□ -0.332e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.542e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC11.08□□□□□ -0.642e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC10.17□□□□□ -0.782e-8■■■□□ 15.6
LARP4Q71RC2 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.34□□□□□ -1.232e-8■■■□□ 15.6
LARP4Q71RC2 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.353e-7■■■□□ 15.6
LARP4Q71RC2 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.513e-7■■■□□ 15.6
LARP4Q71RC2 SNU13-202ENST00000355257 1503 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.653e-7■■■□□ 15.6
LARP4Q71RC2 COX4I1-217ENST00000569997 3946 nt9.35□□□□□ -0.912e-10■■■□□ 15.6
LARP4Q71RC2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.473e-8■■■□□ 15.6
LARP4Q71RC2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.084e-14■■■□□ 15.5
LARP4Q71RC2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.581e-7■■■□□ 15.5
LARP4Q71RC2 FUOM-205ENST00000465384 867 ntTSL 217.95■□□□□ 0.464e-6■■■□□ 15.5
LARP4Q71RC2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.64■□□□□ 0.414e-6■■■□□ 15.5
LARP4Q71RC2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.394e-6■■■□□ 15.5
LARP4Q71RC2 TMC6-210ENST00000588792 843 ntTSL 216.84■□□□□ 0.291e-7■■■□□ 15.5
LARP4Q71RC2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.31■□□□□ 0.24e-6■■■□□ 15.5
LARP4Q71RC2 TMC6-211ENST00000589271 1099 ntTSL 516.28■□□□□ 0.21e-7■■■□□ 15.5
LARP4Q71RC2 SLC39A1-207ENST00000429040 1141 ntTSL 216.15■□□□□ 0.181e-7■■■□□ 15.5
LARP4Q71RC2 TMC6-205ENST00000586126 821 ntTSL 315.1■□□□□ 0.011e-7■■■□□ 15.5
LARP4Q71RC2 TMC6-223ENST00000592594 551 ntTSL 414.99□□□□□ -0.011e-7■■■□□ 15.5
LARP4Q71RC2 TMC6-207ENST00000586697 571 ntTSL 413.9□□□□□ -0.181e-7■■■□□ 15.5
LARP4Q71RC2 FUOM-204ENST00000447176 590 ntTSL 213.35□□□□□ -0.274e-6■■■□□ 15.5
LARP4Q71RC2 TMC6-221ENST00000592063 743 ntTSL 512.73□□□□□ -0.371e-7■■■□□ 15.5
LARP4Q71RC2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.133e-17■■■□□ 15.5
LARP4Q71RC2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.92□□□□□ -0.023e-17■■■□□ 15.5
LARP4Q71RC2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.72e-51■■■□□ 15.5
LARP4Q71RC2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.192e-51■■■□□ 15.5
LARP4Q71RC2 RPLP2-208ENST00000532004 353 ntTSL 314.25□□□□□ -0.132e-51■■■□□ 15.5
LARP4Q71RC2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.1■□□□□ 0.811e-6■■■□□ 15.5
LARP4Q71RC2 CDIPT-208ENST00000567459 434 ntTSL 314.33□□□□□ -0.121e-6■■■□□ 15.5
LARP4Q71RC2 CHCHD10-203ENST00000517886 494 ntTSL 318.5■□□□□ 0.554e-9■■■□□ 15.5
LARP4Q71RC2 LMF2-203ENST00000504717 1233 ntTSL 524.13■■□□□ 1.453e-7■■■□□ 15.5
LARP4Q71RC2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-7■■■□□ 15.5
LARP4Q71RC2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.57■□□□□ 0.083e-7■■■□□ 15.5
LARP4Q71RC2 PDIA3-204ENST00000455250 725 ntTSL 57.91□□□□□ -1.141e-9■■■□□ 15.5
LARP4Q71RC2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.22■□□□□ 0.191e-9■■■□□ 15.5
LARP4Q71RC2 RPL13A-212ENST00000488946 2312 ntTSL 213.96□□□□□ -0.171e-12■■■□□ 15.5
LARP4Q71RC2 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)13.92□□□□□ -0.181e-12■■■□□ 15.5
LARP4Q71RC2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.371e-12■■■□□ 15.5
LARP4Q71RC2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.59□□□□□ -0.391e-12■■■□□ 15.5
LARP4Q71RC2 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.08□□□□□ -0.961e-9■■■□□ 15.5
LARP4Q71RC2 CBFA2T3-211ENST00000570046 284 ntTSL 38.95□□□□□ -0.981e-9■■■□□ 15.5
LARP4Q71RC2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.641e-9■■■□□ 15.5
LARP4Q71RC2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.032e-7■■■□□ 15.5
LARP4Q71RC2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.16□□□□□ -0.142e-7■■■□□ 15.5
LARP4Q71RC2 EPHB4-206ENST00000487222 5058 ntTSL 1 (best)14□□□□□ -0.172e-7■■■□□ 15.5
LARP4Q71RC2 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC11.83□□□□□ -0.512e-7■■■□□ 15.5
LARP4Q71RC2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.021e-10■■■□□ 15.5
LARP4Q71RC2 ATP5B-204ENST00000548474 449 ntTSL 35.88□□□□□ -1.471e-10■■■□□ 15.5
LARP4Q71RC2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.132e-8■■■□□ 15.5
LARP4Q71RC2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.83□□□□□ -0.22e-8■■■□□ 15.5
LARP4Q71RC2 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.32e-8■■■□□ 15.5
Retrieved 100 of 15,922 protein–RNA pairs in 250.4 ms