RNA–Protein interactions for RNA: ENST00000561555.5

CDIPT-202, Transcript of CDP-diacylglycerol--inositol 3-phosphatidyltransferase, humanhuman

TSL 2 BASIC

Gene CDIPT, Length 1,726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIPT-202ENST00000561555 NISCHQ9Y2I1 1504 aa46.35■■■■■ 5.01
CDIPT-202ENST00000561555 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.05
CDIPT-202ENST00000561555 ZCCHC6Q5VYS8 1495 aaKnown RBP38.95■■■■□ 3.83
CDIPT-202ENST00000561555 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
CDIPT-202ENST00000561555 DCAF8L2P0C7V8 631 aa38.18■■■■□ 3.7
CDIPT-202ENST00000561555 ABCC9O60706 1549 aa38.04■■■■□ 3.68
CDIPT-202ENST00000561555 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
CDIPT-202ENST00000561555 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
CDIPT-202ENST00000561555 NACADO15069 1562 aa37.65■■■■□ 3.62
CDIPT-202ENST00000561555 RB1CC1Q8TDY2 1594 aa37.28■■■■□ 3.56
CDIPT-202ENST00000561555 SCRIBQ14160 1630 aa37.05■■■■□ 3.52
CDIPT-202ENST00000561555 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
CDIPT-202ENST00000561555 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
CDIPT-202ENST00000561555 BICRAQ9NZM4 1560 aa36.07■■■■□ 3.37
CDIPT-202ENST00000561555 RSF1Q96T23 1441 aaPredicted RBP35.98■■■■□ 3.35
CDIPT-202ENST00000561555 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
CDIPT-202ENST00000561555 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.34
CDIPT-202ENST00000561555 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
CDIPT-202ENST00000561555 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
CDIPT-202ENST00000561555 SMARCA4P51532 1647 aa35.58■■■■□ 3.29
CDIPT-202ENST00000561555 WIZO95785 1651 aa35.42■■■■□ 3.26
CDIPT-202ENST00000561555 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
CDIPT-202ENST00000561555 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
CDIPT-202ENST00000561555 SMARCA2P51531 1590 aa35.04■■■■□ 3.2
CDIPT-202ENST00000561555 ATAD2BQ9ULI0 1458 aa35.02■■■■□ 3.2
CDIPT-202ENST00000561555 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
CDIPT-202ENST00000561555 CHIC1Q5VXU3 224 aa34.92■■■■□ 3.18
CDIPT-202ENST00000561555 BAZ1BQ9UIG0 1483 aaKnown RBP34.83■■■■□ 3.17
CDIPT-202ENST00000561555 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
CDIPT-202ENST00000561555 NCAPD3P42695 1498 aa34.76■■■■□ 3.15
CDIPT-202ENST00000561555 HMGXB3Q12766 1538 aa34.7■■■■□ 3.15
CDIPT-202ENST00000561555 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
CDIPT-202ENST00000561555 TRIM41Q8WV44 630 aa34.29■■■■□ 3.08
CDIPT-202ENST00000561555 CFTRP13569 1480 aa33.99■■■■□ 3.03
CDIPT-202ENST00000561555 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
CDIPT-202ENST00000561555 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
CDIPT-202ENST00000561555 CADPSQ9ULU8 1353 aa33.86■■■■□ 3.01
CDIPT-202ENST00000561555 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
CDIPT-202ENST00000561555 SYNJ1O43426 1573 aa33.64■■■□□ 2.98
CDIPT-202ENST00000561555 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
CDIPT-202ENST00000561555 LAMC3Q9Y6N6 1575 aa33.54■■■□□ 2.96
CDIPT-202ENST00000561555 FAM9AQ8IZU1 332 aaPredicted RBP33.53■■■□□ 2.96
CDIPT-202ENST00000561555 EEA1Q15075 1411 aa33.53■■■□□ 2.96
CDIPT-202ENST00000561555 BIVM-ERCC5R4GMW8 1640 aa33.51■■■□□ 2.96
CDIPT-202ENST00000561555 LOC105371045A0A1W2PR82 267 aa33.5■■■□□ 2.95
CDIPT-202ENST00000561555 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
CDIPT-202ENST00000561555 FANCD2Q9BXW9 1451 aa33.45■■■□□ 2.94
CDIPT-202ENST00000561555 CUX1P39880 1505 aa33.44■■■□□ 2.94
CDIPT-202ENST00000561555 SOGA1O94964 1423 aa33.42■■■□□ 2.94
CDIPT-202ENST00000561555 NESP48681 1621 aa33.4■■■□□ 2.94
CDIPT-202ENST00000561555 PDS5BQ9NTI5 1447 aa33.32■■■□□ 2.92
CDIPT-202ENST00000561555 CSRNP3Q8WYN3 585 aa33.27■■■□□ 2.92
CDIPT-202ENST00000561555 CEP164Q9UPV0 1460 aa33.24■■■□□ 2.91
CDIPT-202ENST00000561555 RUSC2Q8N2Y8 1516 aa33.23■■■□□ 2.91
CDIPT-202ENST00000561555 DNMBPQ6XZF7 1577 aa33.15■■■□□ 2.9
CDIPT-202ENST00000561555 TOPBP1Q92547 1522 aa33.08■■■□□ 2.89
CDIPT-202ENST00000561555 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
CDIPT-202ENST00000561555 KIF27Q86VH2 1401 aa33.06■■■□□ 2.88
CDIPT-202ENST00000561555 KIF21BO75037 1637 aa32.98■■■□□ 2.87
CDIPT-202ENST00000561555 URB2Q14146 1524 aaKnown RBP32.98■■■□□ 2.87
CDIPT-202ENST00000561555 GOLGA3Q08378 1498 aa32.98■■■□□ 2.87
CDIPT-202ENST00000561555 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
CDIPT-202ENST00000561555 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
CDIPT-202ENST00000561555 POLA1P09884 1462 aaPredicted RBP32.92■■■□□ 2.86
CDIPT-202ENST00000561555 TNIKQ9UKE5 1360 aa32.92■■■□□ 2.86
CDIPT-202ENST00000561555 CUX2O14529 1486 aa32.88■■■□□ 2.85
CDIPT-202ENST00000561555 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
CDIPT-202ENST00000561555 PRXQ9BXM0 1461 aa32.83■■■□□ 2.85
CDIPT-202ENST00000561555 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
CDIPT-202ENST00000561555 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
CDIPT-202ENST00000561555 ERICH3Q5RHP9 1530 aa32.79■■■□□ 2.84
CDIPT-202ENST00000561555 RAD54L2Q9Y4B4 1467 aa32.76■■■□□ 2.84
CDIPT-202ENST00000561555 RAPGEF2Q9Y4G8 1499 aa32.74■■■□□ 2.83
CDIPT-202ENST00000561555 IGF1RP08069 1367 aa32.73■■■□□ 2.83
CDIPT-202ENST00000561555 CEP162Q5TB80 1403 aa32.7■■■□□ 2.82
CDIPT-202ENST00000561555 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
CDIPT-202ENST00000561555 WDR62O43379 1518 aa32.65■■■□□ 2.82
CDIPT-202ENST00000561555 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
CDIPT-202ENST00000561555 CARMIL1Q5VZK9 1371 aa32.57■■■□□ 2.8
CDIPT-202ENST00000561555 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
CDIPT-202ENST00000561555 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.8
CDIPT-202ENST00000561555 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
CDIPT-202ENST00000561555 TDRD9Q8NDG6 1382 aaKnown RBP32.47■■■□□ 2.79
CDIPT-202ENST00000561555 IFT140Q96RY7 1462 aa32.47■■■□□ 2.79
CDIPT-202ENST00000561555 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
CDIPT-202ENST00000561555 CUL7Q14999 1698 aa32.45■■■□□ 2.79
CDIPT-202ENST00000561555 CLIP1P30622 1438 aa32.44■■■□□ 2.78
CDIPT-202ENST00000561555 AQRO60306 1485 aaKnown RBP eCLIP32.24■■■□□ 2.75
CDIPT-202ENST00000561555 GRIN2BQ13224 1484 aa32.24■■■□□ 2.75
CDIPT-202ENST00000561555 PBRM1Q86U86 1689 aa32.19■■■□□ 2.74
CDIPT-202ENST00000561555 VPS8Q8N3P4 1428 aa32.19■■■□□ 2.74
CDIPT-202ENST00000561555 ZNF608Q9ULD9 1512 aaPredicted RBP32.18■■■□□ 2.74
CDIPT-202ENST00000561555 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
CDIPT-202ENST00000561555 TRIM26Q12899 539 aaPredicted RBP32.17■■■□□ 2.74
CDIPT-202ENST00000561555 RANGAP1P46060 587 aaPredicted RBP32.12■■■□□ 2.73
CDIPT-202ENST00000561555 PCGF6Q9BYE7 350 aa32.08■■■□□ 2.73
CDIPT-202ENST00000561555 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
CDIPT-202ENST00000561555 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
CDIPT-202ENST00000561555 ARAP1Q96P48 1450 aa32.07■■■□□ 2.72
CDIPT-202ENST00000561555 ARHGAP35Q9NRY4 1499 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms