RNA–Protein interactions for RNA: ENST00000552347.5

RPL18-213, Transcript of ribosomal protein L18, humanhuman

TSL 5

Gene RPL18, Length 1,645 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-213ENST00000552347 NISCHQ9Y2I1 1504 aa42.52■■■■■ 4.4
RPL18-213ENST00000552347 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
RPL18-213ENST00000552347 ABCC9O60706 1549 aa36.22■■■■□ 3.39
RPL18-213ENST00000552347 ZCCHC6Q5VYS8 1495 aaKnown RBP35.57■■■■□ 3.28
RPL18-213ENST00000552347 DCAF8L2P0C7V8 631 aa35.24■■■■□ 3.23
RPL18-213ENST00000552347 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
RPL18-213ENST00000552347 NACADO15069 1562 aa35.16■■■■□ 3.22
RPL18-213ENST00000552347 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
RPL18-213ENST00000552347 RB1CC1Q8TDY2 1594 aa35.07■■■■□ 3.21
RPL18-213ENST00000552347 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
RPL18-213ENST00000552347 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
RPL18-213ENST00000552347 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
RPL18-213ENST00000552347 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.03
RPL18-213ENST00000552347 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
RPL18-213ENST00000552347 CECR2Q9BXF3 1484 aa33.08■■■□□ 2.89
RPL18-213ENST00000552347 EIF4G1Q04637 1599 aaKnown RBP33.07■■■□□ 2.88
RPL18-213ENST00000552347 BAZ1AQ9NRL2 1556 aaPredicted RBP32.93■■■□□ 2.86
RPL18-213ENST00000552347 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
RPL18-213ENST00000552347 MROH2BQ7Z745 1585 aa32.81■■■□□ 2.84
RPL18-213ENST00000552347 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
RPL18-213ENST00000552347 DNAJC5BQ9UF47 199 aa32.69■■■□□ 2.82
RPL18-213ENST00000552347 RSF1Q96T23 1441 aaPredicted RBP32.61■■■□□ 2.81
RPL18-213ENST00000552347 PEG3Q9GZU2 1588 aa32.56■■■□□ 2.8
RPL18-213ENST00000552347 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
RPL18-213ENST00000552347 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
RPL18-213ENST00000552347 WIZO95785 1651 aa32.5■■■□□ 2.79
RPL18-213ENST00000552347 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
RPL18-213ENST00000552347 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
RPL18-213ENST00000552347 BAZ1BQ9UIG0 1483 aaKnown RBP32.32■■■□□ 2.76
RPL18-213ENST00000552347 SUPT5HO00267 1087 aaKnown RBP32.18■■■□□ 2.74
RPL18-213ENST00000552347 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
RPL18-213ENST00000552347 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
RPL18-213ENST00000552347 NESP48681 1621 aa31.53■■■□□ 2.64
RPL18-213ENST00000552347 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
RPL18-213ENST00000552347 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
RPL18-213ENST00000552347 CFTRP13569 1480 aa31.46■■■□□ 2.63
RPL18-213ENST00000552347 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
RPL18-213ENST00000552347 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
RPL18-213ENST00000552347 KIF21AQ7Z4S6 1674 aa31.2■■■□□ 2.59
RPL18-213ENST00000552347 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
RPL18-213ENST00000552347 ERCC6Q03468 1493 aa31.15■■■□□ 2.58
RPL18-213ENST00000552347 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
RPL18-213ENST00000552347 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
RPL18-213ENST00000552347 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
RPL18-213ENST00000552347 URB2Q14146 1524 aaKnown RBP30.84■■■□□ 2.53
RPL18-213ENST00000552347 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
RPL18-213ENST00000552347 WDR62O43379 1518 aa30.82■■■□□ 2.52
RPL18-213ENST00000552347 DNMBPQ6XZF7 1577 aa30.77■■■□□ 2.52
RPL18-213ENST00000552347 CUX1P39880 1505 aa30.75■■■□□ 2.51
RPL18-213ENST00000552347 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
RPL18-213ENST00000552347 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.511e-7■■■■■ 66.8
RPL18-213ENST00000552347 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
RPL18-213ENST00000552347 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
RPL18-213ENST00000552347 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
RPL18-213ENST00000552347 CUX2O14529 1486 aa30.6■■■□□ 2.49
RPL18-213ENST00000552347 FGD5Q6ZNL6 1462 aa30.54■■■□□ 2.48
RPL18-213ENST00000552347 POLA1P09884 1462 aaPredicted RBP30.53■■■□□ 2.48
RPL18-213ENST00000552347 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.46
RPL18-213ENST00000552347 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
RPL18-213ENST00000552347 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
RPL18-213ENST00000552347 SOGA1O94964 1423 aa30.37■■■□□ 2.45
RPL18-213ENST00000552347 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
RPL18-213ENST00000552347 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
RPL18-213ENST00000552347 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
RPL18-213ENST00000552347 ABCA10Q8WWZ4 1543 aa30.26■■■□□ 2.43
RPL18-213ENST00000552347 ZNF608Q9ULD9 1512 aaPredicted RBP30.24■■■□□ 2.43
RPL18-213ENST00000552347 EIF4G3O43432 1585 aaKnown RBP30.18■■■□□ 2.42
RPL18-213ENST00000552347 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
RPL18-213ENST00000552347 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
RPL18-213ENST00000552347 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.415e-8■■■■■ 45.6
RPL18-213ENST00000552347 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
RPL18-213ENST00000552347 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
RPL18-213ENST00000552347 PBRM1Q86U86 1689 aa30.02■■■□□ 2.4
RPL18-213ENST00000552347 RUSC2Q8N2Y8 1516 aa29.97■■■□□ 2.39
RPL18-213ENST00000552347 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
RPL18-213ENST00000552347 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
RPL18-213ENST00000552347 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
RPL18-213ENST00000552347 MAGI1Q96QZ7 1491 aaPredicted RBP29.84■■■□□ 2.37
RPL18-213ENST00000552347 IGF1RP08069 1367 aa29.82■■■□□ 2.36
RPL18-213ENST00000552347 EEA1Q15075 1411 aa29.82■■■□□ 2.36
RPL18-213ENST00000552347 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
RPL18-213ENST00000552347 CUL7Q14999 1698 aa29.77■■■□□ 2.36
RPL18-213ENST00000552347 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
RPL18-213ENST00000552347 SYNJ2O15056 1496 aa29.71■■■□□ 2.35
RPL18-213ENST00000552347 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
RPL18-213ENST00000552347 CHD1O14646 1710 aa29.69■■■□□ 2.34
RPL18-213ENST00000552347 CSRNP3Q8WYN3 585 aa29.67■■■□□ 2.34
RPL18-213ENST00000552347 CARMIL1Q5VZK9 1371 aa29.66■■■□□ 2.34
RPL18-213ENST00000552347 FBLN2P98095 1184 aa29.61■■■□□ 2.33
RPL18-213ENST00000552347 PRXQ9BXM0 1461 aa29.61■■■□□ 2.33
RPL18-213ENST00000552347 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
RPL18-213ENST00000552347 GRIN2AQ12879 1464 aa29.6■■■□□ 2.33
RPL18-213ENST00000552347 RAPGEF2Q9Y4G8 1499 aa29.56■■■□□ 2.32
RPL18-213ENST00000552347 KIF21BO75037 1637 aa29.52■■■□□ 2.32
RPL18-213ENST00000552347 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
RPL18-213ENST00000552347 NUP160Q12769 1436 aa29.44■■■□□ 2.3
RPL18-213ENST00000552347 OSCARQ8IYS5 282 aa29.39■■■□□ 2.3
RPL18-213ENST00000552347 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
RPL18-213ENST00000552347 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
RPL18-213ENST00000552347 EHMT2Q96KQ7 1210 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms