RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
EPHB4-210ENST00000616502 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
EPHB4-210ENST00000616502 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.62
EPHB4-210ENST00000616502 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
EPHB4-210ENST00000616502 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
EPHB4-210ENST00000616502 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
EPHB4-210ENST00000616502 HRCP23327 699 aa23.44■■□□□ 1.34
EPHB4-210ENST00000616502 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
EPHB4-210ENST00000616502 FAM9AQ8IZU1 332 aaPredicted RBP23.2■■□□□ 1.3
EPHB4-210ENST00000616502 ABCC9O60706 1549 aa23.1■■□□□ 1.29
EPHB4-210ENST00000616502 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
EPHB4-210ENST00000616502 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
EPHB4-210ENST00000616502 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
EPHB4-210ENST00000616502 TTBK1Q5TCY1 1321 aaPredicted RBP22.7■■□□□ 1.22
EPHB4-210ENST00000616502 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
EPHB4-210ENST00000616502 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
EPHB4-210ENST00000616502 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
EPHB4-210ENST00000616502 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
EPHB4-210ENST00000616502 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
EPHB4-210ENST00000616502 PELP1Q8IZL8 1130 aaKnown RBP22.46■■□□□ 1.19
EPHB4-210ENST00000616502 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
EPHB4-210ENST00000616502 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
EPHB4-210ENST00000616502 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
EPHB4-210ENST00000616502 CCER1Q8TC90 406 aaPredicted RBP22.17■■□□□ 1.14
EPHB4-210ENST00000616502 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
EPHB4-210ENST00000616502 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
EPHB4-210ENST00000616502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
EPHB4-210ENST00000616502 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
EPHB4-210ENST00000616502 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.11
EPHB4-210ENST00000616502 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
EPHB4-210ENST00000616502 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
EPHB4-210ENST00000616502 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
EPHB4-210ENST00000616502 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
EPHB4-210ENST00000616502 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
EPHB4-210ENST00000616502 ACIN1Q9UKV3 1341 aaKnown RBP21.73■■□□□ 1.07
EPHB4-210ENST00000616502 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
EPHB4-210ENST00000616502 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
EPHB4-210ENST00000616502 MYT1Q01538 1121 aa21.55■■□□□ 1.04
EPHB4-210ENST00000616502 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
EPHB4-210ENST00000616502 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
EPHB4-210ENST00000616502 APLP2Q06481 763 aa21.48■■□□□ 1.03
EPHB4-210ENST00000616502 NACADO15069 1562 aa21.43■■□□□ 1.02
EPHB4-210ENST00000616502 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.02
EPHB4-210ENST00000616502 WIZO95785 1651 aa21.34■■□□□ 1.01
EPHB4-210ENST00000616502 ITGAEP38570 1179 aa21.34■■□□□ 1.01
EPHB4-210ENST00000616502 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
EPHB4-210ENST00000616502 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
EPHB4-210ENST00000616502 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
EPHB4-210ENST00000616502 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
EPHB4-210ENST00000616502 MIER1Q8N108 512 aa21.08■□□□□ 0.97
EPHB4-210ENST00000616502 SOGA1O94964 1423 aa21.08■□□□□ 0.96
EPHB4-210ENST00000616502 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
EPHB4-210ENST00000616502 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
EPHB4-210ENST00000616502 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
EPHB4-210ENST00000616502 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
EPHB4-210ENST00000616502 BCANQ96GW7 911 aa20.89■□□□□ 0.93
EPHB4-210ENST00000616502 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.93
EPHB4-210ENST00000616502 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
EPHB4-210ENST00000616502 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
EPHB4-210ENST00000616502 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
EPHB4-210ENST00000616502 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
EPHB4-210ENST00000616502 NEFLP07196 543 aa20.71■□□□□ 0.91
EPHB4-210ENST00000616502 FBLN2P98095 1184 aa20.68■□□□□ 0.9
EPHB4-210ENST00000616502 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
EPHB4-210ENST00000616502 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.9
EPHB4-210ENST00000616502 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
EPHB4-210ENST00000616502 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
EPHB4-210ENST00000616502 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
EPHB4-210ENST00000616502 CLIP1P30622 1438 aa20.58■□□□□ 0.89
EPHB4-210ENST00000616502 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
EPHB4-210ENST00000616502 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
EPHB4-210ENST00000616502 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.87
EPHB4-210ENST00000616502 FKBP8Q14318 412 aa20.5■□□□□ 0.87
EPHB4-210ENST00000616502 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
EPHB4-210ENST00000616502 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
EPHB4-210ENST00000616502 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
EPHB4-210ENST00000616502 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.87
EPHB4-210ENST00000616502 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
EPHB4-210ENST00000616502 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
EPHB4-210ENST00000616502 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
EPHB4-210ENST00000616502 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
EPHB4-210ENST00000616502 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
EPHB4-210ENST00000616502 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.85
EPHB4-210ENST00000616502 CUX2O14529 1486 aa20.33■□□□□ 0.84
EPHB4-210ENST00000616502 TSHZ2Q9NRE2 1034 aa20.32■□□□□ 0.84
EPHB4-210ENST00000616502 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
EPHB4-210ENST00000616502 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
EPHB4-210ENST00000616502 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
EPHB4-210ENST00000616502 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
EPHB4-210ENST00000616502 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
EPHB4-210ENST00000616502 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
EPHB4-210ENST00000616502 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
EPHB4-210ENST00000616502 EEA1Q15075 1411 aa20.25■□□□□ 0.83
EPHB4-210ENST00000616502 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
EPHB4-210ENST00000616502 ANP32CO43423 234 aa20.22■□□□□ 0.83
EPHB4-210ENST00000616502 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
EPHB4-210ENST00000616502 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
EPHB4-210ENST00000616502 NESP48681 1621 aa20.19■□□□□ 0.82
EPHB4-210ENST00000616502 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
EPHB4-210ENST00000616502 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms