RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.1
CALR-204ENST00000586967 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
CALR-204ENST00000586967 ABCC9O60706 1549 aa29.04■■■□□ 2.24
CALR-204ENST00000586967 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
CALR-204ENST00000586967 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
CALR-204ENST00000586967 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
CALR-204ENST00000586967 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.15
CALR-204ENST00000586967 NACADO15069 1562 aa28.46■■■□□ 2.15
CALR-204ENST00000586967 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
CALR-204ENST00000586967 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
CALR-204ENST00000586967 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
CALR-204ENST00000586967 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
CALR-204ENST00000586967 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
CALR-204ENST00000586967 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.953e-7■□□□□ 8.9
CALR-204ENST00000586967 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
CALR-204ENST00000586967 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
CALR-204ENST00000586967 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
CALR-204ENST00000586967 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
CALR-204ENST00000586967 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
CALR-204ENST00000586967 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
CALR-204ENST00000586967 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
CALR-204ENST00000586967 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
CALR-204ENST00000586967 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
CALR-204ENST00000586967 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
CALR-204ENST00000586967 WIZO95785 1651 aa26.27■■□□□ 1.8
CALR-204ENST00000586967 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
CALR-204ENST00000586967 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
CALR-204ENST00000586967 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
CALR-204ENST00000586967 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
CALR-204ENST00000586967 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
CALR-204ENST00000586967 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
CALR-204ENST00000586967 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
CALR-204ENST00000586967 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
CALR-204ENST00000586967 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
CALR-204ENST00000586967 CFTRP13569 1480 aa25.45■■□□□ 1.66
CALR-204ENST00000586967 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
CALR-204ENST00000586967 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
CALR-204ENST00000586967 NESP48681 1621 aa25.28■■□□□ 1.64
CALR-204ENST00000586967 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
CALR-204ENST00000586967 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
CALR-204ENST00000586967 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
CALR-204ENST00000586967 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
CALR-204ENST00000586967 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
CALR-204ENST00000586967 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
CALR-204ENST00000586967 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
CALR-204ENST00000586967 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
CALR-204ENST00000586967 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
CALR-204ENST00000586967 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
CALR-204ENST00000586967 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
CALR-204ENST00000586967 CUX1P39880 1505 aa24.85■■□□□ 1.57
CALR-204ENST00000586967 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
CALR-204ENST00000586967 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
CALR-204ENST00000586967 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
CALR-204ENST00000586967 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
CALR-204ENST00000586967 WDR62O43379 1518 aa24.82■■□□□ 1.56
CALR-204ENST00000586967 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
CALR-204ENST00000586967 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
CALR-204ENST00000586967 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
CALR-204ENST00000586967 CUX2O14529 1486 aa24.61■■□□□ 1.53
CALR-204ENST00000586967 SOGA1O94964 1423 aa24.6■■□□□ 1.53
CALR-204ENST00000586967 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
CALR-204ENST00000586967 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
CALR-204ENST00000586967 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
CALR-204ENST00000586967 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
CALR-204ENST00000586967 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
CALR-204ENST00000586967 EEA1Q15075 1411 aa24.46■■□□□ 1.51
CALR-204ENST00000586967 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
CALR-204ENST00000586967 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
CALR-204ENST00000586967 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
CALR-204ENST00000586967 TDRD9Q8NDG6 1382 aaKnown RBP24.32■■□□□ 1.48
CALR-204ENST00000586967 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
CALR-204ENST00000586967 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
CALR-204ENST00000586967 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
CALR-204ENST00000586967 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.471e-36■■□□□ 12.6
CALR-204ENST00000586967 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
CALR-204ENST00000586967 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
CALR-204ENST00000586967 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
CALR-204ENST00000586967 CSRNP3Q8WYN3 585 aa24.24■■□□□ 1.47
CALR-204ENST00000586967 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
CALR-204ENST00000586967 CUL7Q14999 1698 aa24.2■■□□□ 1.46
CALR-204ENST00000586967 IGF1RP08069 1367 aa24.18■■□□□ 1.46
CALR-204ENST00000586967 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
CALR-204ENST00000586967 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
CALR-204ENST00000586967 KIF21BO75037 1637 aa24.1■■□□□ 1.45
CALR-204ENST00000586967 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
CALR-204ENST00000586967 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
CALR-204ENST00000586967 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
CALR-204ENST00000586967 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
CALR-204ENST00000586967 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
CALR-204ENST00000586967 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
CALR-204ENST00000586967 GOLGA3Q08378 1498 aa24■■□□□ 1.43
CALR-204ENST00000586967 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
CALR-204ENST00000586967 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
CALR-204ENST00000586967 FBLN2P98095 1184 aa23.9■■□□□ 1.42
CALR-204ENST00000586967 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
CALR-204ENST00000586967 CHD1O14646 1710 aa23.87■■□□□ 1.41
CALR-204ENST00000586967 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
CALR-204ENST00000586967 TNIKQ9UKE5 1360 aa23.8■■□□□ 1.4
CALR-204ENST00000586967 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
CALR-204ENST00000586967 NUP160Q12769 1436 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms