RNA–Protein interactions for RNA: ENST00000588792.5

TMC6-210, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 843 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-210ENST00000588792 NISCHQ9Y2I1 1504 aa44.13■■■■■ 4.65
TMC6-210ENST00000588792 CCDC180Q9P1Z9 1646 aa39.25■■■■□ 3.87
TMC6-210ENST00000588792 ABCC9O60706 1549 aa38.28■■■■□ 3.72
TMC6-210ENST00000588792 RB1CC1Q8TDY2 1594 aa36.88■■■■□ 3.49
TMC6-210ENST00000588792 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
TMC6-210ENST00000588792 NACADO15069 1562 aa36.84■■■■□ 3.49
TMC6-210ENST00000588792 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
TMC6-210ENST00000588792 MYO15BQ96JP2 1530 aa36.62■■■■□ 3.45
TMC6-210ENST00000588792 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
TMC6-210ENST00000588792 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
TMC6-210ENST00000588792 SCRIBQ14160 1630 aa35.82■■■■□ 3.32
TMC6-210ENST00000588792 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.32
TMC6-210ENST00000588792 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
TMC6-210ENST00000588792 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
TMC6-210ENST00000588792 DNAJC5BQ9UF47 199 aa34.99■■■■□ 3.19
TMC6-210ENST00000588792 EIF4G1Q04637 1599 aaKnown RBP34.8■■■■□ 3.16
TMC6-210ENST00000588792 CC2D2AQ9P2K1 1620 aa34.65■■■■□ 3.14
TMC6-210ENST00000588792 CECR2Q9BXF3 1484 aa34.37■■■■□ 3.09
TMC6-210ENST00000588792 SMARCA4P51532 1647 aa34.26■■■■□ 3.07
TMC6-210ENST00000588792 BAZ1AQ9NRL2 1556 aaPredicted RBP34.22■■■■□ 3.07
TMC6-210ENST00000588792 MROH2BQ7Z745 1585 aa34.02■■■■□ 3.04
TMC6-210ENST00000588792 SMARCA2P51531 1590 aa34■■■■□ 3.03
TMC6-210ENST00000588792 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
TMC6-210ENST00000588792 NCAPD3P42695 1498 aa33.95■■■■□ 3.03
TMC6-210ENST00000588792 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
TMC6-210ENST00000588792 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
TMC6-210ENST00000588792 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
TMC6-210ENST00000588792 WIZO95785 1651 aa33.71■■■□□ 2.99
TMC6-210ENST00000588792 RSF1Q96T23 1441 aaPredicted RBP33.63■■■□□ 2.97
TMC6-210ENST00000588792 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
TMC6-210ENST00000588792 NESP48681 1621 aa33.15■■■□□ 2.9
TMC6-210ENST00000588792 LAMC3Q9Y6N6 1575 aa33.1■■■□□ 2.89
TMC6-210ENST00000588792 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
TMC6-210ENST00000588792 CADPSQ9ULU8 1353 aa32.97■■■□□ 2.87
TMC6-210ENST00000588792 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
TMC6-210ENST00000588792 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
TMC6-210ENST00000588792 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
TMC6-210ENST00000588792 KIF21AQ7Z4S6 1674 aa32.83■■■□□ 2.85
TMC6-210ENST00000588792 CFTRP13569 1480 aa32.8■■■□□ 2.84
TMC6-210ENST00000588792 PRDM2Q13029 1718 aa32.69■■■□□ 2.82
TMC6-210ENST00000588792 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
TMC6-210ENST00000588792 FANCD2Q9BXW9 1451 aa32.62■■■□□ 2.81
TMC6-210ENST00000588792 CUX2O14529 1486 aa32.6■■■□□ 2.81
TMC6-210ENST00000588792 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
TMC6-210ENST00000588792 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.79
TMC6-210ENST00000588792 WDR62O43379 1518 aa32.41■■■□□ 2.78
TMC6-210ENST00000588792 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
TMC6-210ENST00000588792 TOPBP1Q92547 1522 aa32.12■■■□□ 2.73
TMC6-210ENST00000588792 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
TMC6-210ENST00000588792 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
TMC6-210ENST00000588792 CUX1P39880 1505 aa31.9■■■□□ 2.7
TMC6-210ENST00000588792 IFT140Q96RY7 1462 aa31.89■■■□□ 2.7
TMC6-210ENST00000588792 DNAJC5Q9H3Z4 198 aa31.88■■■□□ 2.69
TMC6-210ENST00000588792 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
TMC6-210ENST00000588792 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
TMC6-210ENST00000588792 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
TMC6-210ENST00000588792 WRNQ14191 1432 aaPredicted RBP eCLIP31.74■■■□□ 2.67
TMC6-210ENST00000588792 ZNF608Q9ULD9 1512 aaPredicted RBP31.73■■■□□ 2.67
TMC6-210ENST00000588792 SOGA1O94964 1423 aa31.71■■■□□ 2.67
TMC6-210ENST00000588792 RAD54L2Q9Y4B4 1467 aa31.71■■■□□ 2.67
TMC6-210ENST00000588792 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.66
TMC6-210ENST00000588792 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
TMC6-210ENST00000588792 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
TMC6-210ENST00000588792 EIF4G3O43432 1585 aaKnown RBP31.66■■■□□ 2.66
TMC6-210ENST00000588792 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
TMC6-210ENST00000588792 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.642e-10■■■■■ 30.5
TMC6-210ENST00000588792 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
TMC6-210ENST00000588792 ABCA10Q8WWZ4 1543 aa31.48■■■□□ 2.63
TMC6-210ENST00000588792 ABCA5Q8WWZ7 1642 aa31.38■■■□□ 2.61
TMC6-210ENST00000588792 PBRM1Q86U86 1689 aa31.37■■■□□ 2.61
TMC6-210ENST00000588792 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
TMC6-210ENST00000588792 GRIN2BQ13224 1484 aa31.33■■■□□ 2.61
TMC6-210ENST00000588792 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
TMC6-210ENST00000588792 CHD1O14646 1710 aa31.28■■■□□ 2.6
TMC6-210ENST00000588792 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
TMC6-210ENST00000588792 OSCARQ8IYS5 282 aa31.24■■■□□ 2.59
TMC6-210ENST00000588792 FBLN2P98095 1184 aa31.18■■■□□ 2.58
TMC6-210ENST00000588792 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
TMC6-210ENST00000588792 ERICH3Q5RHP9 1530 aa31.11■■■□□ 2.57
TMC6-210ENST00000588792 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
TMC6-210ENST00000588792 ADAMTS12P58397 1594 aa31.07■■■□□ 2.56
TMC6-210ENST00000588792 KIF27Q86VH2 1401 aa31.07■■■□□ 2.56
TMC6-210ENST00000588792 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
TMC6-210ENST00000588792 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
TMC6-210ENST00000588792 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
TMC6-210ENST00000588792 CUL7Q14999 1698 aa30.89■■■□□ 2.54
TMC6-210ENST00000588792 IGF1RP08069 1367 aa30.89■■■□□ 2.54
TMC6-210ENST00000588792 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
TMC6-210ENST00000588792 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
TMC6-210ENST00000588792 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
TMC6-210ENST00000588792 RIMBP3CA6NJZ7 1639 aa30.79■■■□□ 2.52
TMC6-210ENST00000588792 RIMBP3BA6NNM3 1639 aa30.79■■■□□ 2.52
TMC6-210ENST00000588792 RIMBP3Q9UFD9 1639 aa30.79■■■□□ 2.52
TMC6-210ENST00000588792 NUP160Q12769 1436 aa30.77■■■□□ 2.52
TMC6-210ENST00000588792 ARHGEF11O15085 1522 aa30.76■■■□□ 2.51
TMC6-210ENST00000588792 CARMIL1Q5VZK9 1371 aa30.73■■■□□ 2.51
TMC6-210ENST00000588792 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
TMC6-210ENST00000588792 RAPGEF2Q9Y4G8 1499 aa30.58■■■□□ 2.49
TMC6-210ENST00000588792 SHROOM2Q13796 1616 aa30.58■■■□□ 2.49
TMC6-210ENST00000588792 EEA1Q15075 1411 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms