RNA–Protein interactions for RNA: ENST00000429040.5

SLC39A1-207, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2

Gene SLC39A1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-207ENST00000429040 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
SLC39A1-207ENST00000429040 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
SLC39A1-207ENST00000429040 ABCC9O60706 1549 aa36.64■■■■□ 3.46
SLC39A1-207ENST00000429040 RB1CC1Q8TDY2 1594 aa34.99■■■■□ 3.19
SLC39A1-207ENST00000429040 NACADO15069 1562 aa34.8■■■■□ 3.16
SLC39A1-207ENST00000429040 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
SLC39A1-207ENST00000429040 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
SLC39A1-207ENST00000429040 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
SLC39A1-207ENST00000429040 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
SLC39A1-207ENST00000429040 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
SLC39A1-207ENST00000429040 UNC13AQ9UPW8 1703 aa34.17■■■■□ 3.06
SLC39A1-207ENST00000429040 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
SLC39A1-207ENST00000429040 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
SLC39A1-207ENST00000429040 SCRIBQ14160 1630 aa33.6■■■□□ 2.97
SLC39A1-207ENST00000429040 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
SLC39A1-207ENST00000429040 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
SLC39A1-207ENST00000429040 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
SLC39A1-207ENST00000429040 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
SLC39A1-207ENST00000429040 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
SLC39A1-207ENST00000429040 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
SLC39A1-207ENST00000429040 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
SLC39A1-207ENST00000429040 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
SLC39A1-207ENST00000429040 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
SLC39A1-207ENST00000429040 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
SLC39A1-207ENST00000429040 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
SLC39A1-207ENST00000429040 PEG3Q9GZU2 1588 aa31.76■■■□□ 2.67
SLC39A1-207ENST00000429040 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
SLC39A1-207ENST00000429040 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
SLC39A1-207ENST00000429040 NESP48681 1621 aa31.53■■■□□ 2.64
SLC39A1-207ENST00000429040 CUX2O14529 1486 aa31.49■■■□□ 2.63
SLC39A1-207ENST00000429040 LAMC3Q9Y6N6 1575 aa31.37■■■□□ 2.61
SLC39A1-207ENST00000429040 WIZO95785 1651 aa31.36■■■□□ 2.61
SLC39A1-207ENST00000429040 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
SLC39A1-207ENST00000429040 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
SLC39A1-207ENST00000429040 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
SLC39A1-207ENST00000429040 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
SLC39A1-207ENST00000429040 THOC2Q8NI27 1593 aaKnown RBP31.16■■■□□ 2.58
SLC39A1-207ENST00000429040 KIF21AQ7Z4S6 1674 aa31.13■■■□□ 2.57
SLC39A1-207ENST00000429040 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
SLC39A1-207ENST00000429040 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.54
SLC39A1-207ENST00000429040 CFTRP13569 1480 aa30.85■■■□□ 2.53
SLC39A1-207ENST00000429040 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
SLC39A1-207ENST00000429040 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
SLC39A1-207ENST00000429040 WDR62O43379 1518 aa30.8■■■□□ 2.52
SLC39A1-207ENST00000429040 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
SLC39A1-207ENST00000429040 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
SLC39A1-207ENST00000429040 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
SLC39A1-207ENST00000429040 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
SLC39A1-207ENST00000429040 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
SLC39A1-207ENST00000429040 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
SLC39A1-207ENST00000429040 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
SLC39A1-207ENST00000429040 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
SLC39A1-207ENST00000429040 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
SLC39A1-207ENST00000429040 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
SLC39A1-207ENST00000429040 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
SLC39A1-207ENST00000429040 EIF4G3O43432 1585 aaKnown RBP29.95■■■□□ 2.39
SLC39A1-207ENST00000429040 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
SLC39A1-207ENST00000429040 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
SLC39A1-207ENST00000429040 AQRO60306 1485 aaKnown RBP eCLIP29.89■■■□□ 2.382e-6■■■■■ 26.9
SLC39A1-207ENST00000429040 SOGA1O94964 1423 aa29.84■■■□□ 2.37
SLC39A1-207ENST00000429040 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
SLC39A1-207ENST00000429040 CUX1P39880 1505 aa29.8■■■□□ 2.36
SLC39A1-207ENST00000429040 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
SLC39A1-207ENST00000429040 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
SLC39A1-207ENST00000429040 CHD1O14646 1710 aa29.69■■■□□ 2.34
SLC39A1-207ENST00000429040 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
SLC39A1-207ENST00000429040 FBLN2P98095 1184 aa29.67■■■□□ 2.34
SLC39A1-207ENST00000429040 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
SLC39A1-207ENST00000429040 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
SLC39A1-207ENST00000429040 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
SLC39A1-207ENST00000429040 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
SLC39A1-207ENST00000429040 SNAPC4Q5SXM2 1469 aa29.58■■■□□ 2.33
SLC39A1-207ENST00000429040 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
SLC39A1-207ENST00000429040 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
SLC39A1-207ENST00000429040 CHMP7Q8WUX9 453 aaPredicted RBP29.5■■■□□ 2.31
SLC39A1-207ENST00000429040 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
SLC39A1-207ENST00000429040 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
SLC39A1-207ENST00000429040 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
SLC39A1-207ENST00000429040 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
SLC39A1-207ENST00000429040 WRNQ14191 1432 aaPredicted RBP eCLIP29.41■■■□□ 2.3
SLC39A1-207ENST00000429040 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
SLC39A1-207ENST00000429040 TOP2BQ02880 1626 aa29.39■■■□□ 2.3
SLC39A1-207ENST00000429040 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
SLC39A1-207ENST00000429040 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
SLC39A1-207ENST00000429040 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
SLC39A1-207ENST00000429040 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
SLC39A1-207ENST00000429040 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
SLC39A1-207ENST00000429040 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
SLC39A1-207ENST00000429040 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
SLC39A1-207ENST00000429040 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
SLC39A1-207ENST00000429040 ERICH3Q5RHP9 1530 aa29.11■■■□□ 2.25
SLC39A1-207ENST00000429040 NUP160Q12769 1436 aa29.04■■■□□ 2.24
SLC39A1-207ENST00000429040 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
SLC39A1-207ENST00000429040 TRHP20396 242 aaPredicted RBP29.02■■■□□ 2.24
SLC39A1-207ENST00000429040 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
SLC39A1-207ENST00000429040 SHROOM2Q13796 1616 aa28.89■■■□□ 2.22
SLC39A1-207ENST00000429040 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
SLC39A1-207ENST00000429040 IGF1RP08069 1367 aa28.8■■■□□ 2.2
SLC39A1-207ENST00000429040 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
SLC39A1-207ENST00000429040 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms