RNA–Protein interactions for RNA: ENST00000550671.1

RPL18-210, Transcript of ribosomal protein L18, humanhuman

TSL 2

Gene RPL18, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-210ENST00000550671 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.55
RPL18-210ENST00000550671 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
RPL18-210ENST00000550671 ABCC9O60706 1549 aa26.9■■□□□ 1.9
RPL18-210ENST00000550671 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
RPL18-210ENST00000550671 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
RPL18-210ENST00000550671 NACADO15069 1562 aa25.82■■□□□ 1.72
RPL18-210ENST00000550671 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
RPL18-210ENST00000550671 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
RPL18-210ENST00000550671 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
RPL18-210ENST00000550671 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
RPL18-210ENST00000550671 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
RPL18-210ENST00000550671 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
RPL18-210ENST00000550671 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
RPL18-210ENST00000550671 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
RPL18-210ENST00000550671 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
RPL18-210ENST00000550671 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
RPL18-210ENST00000550671 CC2D2AQ9P2K1 1620 aa24.26■■□□□ 1.47
RPL18-210ENST00000550671 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
RPL18-210ENST00000550671 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
RPL18-210ENST00000550671 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
RPL18-210ENST00000550671 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
RPL18-210ENST00000550671 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
RPL18-210ENST00000550671 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
RPL18-210ENST00000550671 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
RPL18-210ENST00000550671 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
RPL18-210ENST00000550671 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
RPL18-210ENST00000550671 BAZ1BQ9UIG0 1483 aaKnown RBP23.7■■□□□ 1.38
RPL18-210ENST00000550671 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
RPL18-210ENST00000550671 WIZO95785 1651 aa23.57■■□□□ 1.36
RPL18-210ENST00000550671 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
RPL18-210ENST00000550671 NESP48681 1621 aa23.26■■□□□ 1.31
RPL18-210ENST00000550671 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
RPL18-210ENST00000550671 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
RPL18-210ENST00000550671 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
RPL18-210ENST00000550671 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
RPL18-210ENST00000550671 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
RPL18-210ENST00000550671 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
RPL18-210ENST00000550671 CFTRP13569 1480 aa23.04■■□□□ 1.28
RPL18-210ENST00000550671 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
RPL18-210ENST00000550671 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
RPL18-210ENST00000550671 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
RPL18-210ENST00000550671 CUX2O14529 1486 aa22.86■■□□□ 1.25
RPL18-210ENST00000550671 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
RPL18-210ENST00000550671 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
RPL18-210ENST00000550671 WDR62O43379 1518 aa22.71■■□□□ 1.23
RPL18-210ENST00000550671 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
RPL18-210ENST00000550671 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
RPL18-210ENST00000550671 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
RPL18-210ENST00000550671 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
RPL18-210ENST00000550671 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
RPL18-210ENST00000550671 CUX1P39880 1505 aa22.39■■□□□ 1.17
RPL18-210ENST00000550671 IFT140Q96RY7 1462 aa22.39■■□□□ 1.17
RPL18-210ENST00000550671 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
RPL18-210ENST00000550671 FGD5Q6ZNL6 1462 aa22.32■■□□□ 1.16
RPL18-210ENST00000550671 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.161e-7■■■■■ 66.8
RPL18-210ENST00000550671 SOGA1O94964 1423 aa22.3■■□□□ 1.16
RPL18-210ENST00000550671 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
RPL18-210ENST00000550671 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
RPL18-210ENST00000550671 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
RPL18-210ENST00000550671 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
RPL18-210ENST00000550671 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.147e-8■■■■■ 54.8
RPL18-210ENST00000550671 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
RPL18-210ENST00000550671 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
RPL18-210ENST00000550671 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
RPL18-210ENST00000550671 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
RPL18-210ENST00000550671 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
RPL18-210ENST00000550671 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
RPL18-210ENST00000550671 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
RPL18-210ENST00000550671 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
RPL18-210ENST00000550671 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
RPL18-210ENST00000550671 OSCARQ8IYS5 282 aa22■■□□□ 1.11
RPL18-210ENST00000550671 FBLN2P98095 1184 aa21.99■■□□□ 1.11
RPL18-210ENST00000550671 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
RPL18-210ENST00000550671 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
RPL18-210ENST00000550671 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
RPL18-210ENST00000550671 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
RPL18-210ENST00000550671 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
RPL18-210ENST00000550671 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
RPL18-210ENST00000550671 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
RPL18-210ENST00000550671 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
RPL18-210ENST00000550671 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
RPL18-210ENST00000550671 CHD1O14646 1710 aa21.81■■□□□ 1.08
RPL18-210ENST00000550671 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
RPL18-210ENST00000550671 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
RPL18-210ENST00000550671 IGF1RP08069 1367 aa21.74■■□□□ 1.07
RPL18-210ENST00000550671 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
RPL18-210ENST00000550671 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
RPL18-210ENST00000550671 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
RPL18-210ENST00000550671 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
RPL18-210ENST00000550671 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
RPL18-210ENST00000550671 NUP160Q12769 1436 aa21.61■■□□□ 1.05
RPL18-210ENST00000550671 CUL7Q14999 1698 aa21.6■■□□□ 1.05
RPL18-210ENST00000550671 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
RPL18-210ENST00000550671 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
RPL18-210ENST00000550671 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
RPL18-210ENST00000550671 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
RPL18-210ENST00000550671 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
RPL18-210ENST00000550671 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
RPL18-210ENST00000550671 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
RPL18-210ENST00000550671 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms