RNA–Protein interactions for RNA: ENST00000549920.5

RPL18-208, Transcript of ribosomal protein L18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL18, Length 1,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-208ENST00000549920 NISCHQ9Y2I1 1504 aa43.23■■■■■ 4.51
RPL18-208ENST00000549920 CCDC180Q9P1Z9 1646 aa38.72■■■■□ 3.79
RPL18-208ENST00000549920 ABCC9O60706 1549 aa38.61■■■■□ 3.77
RPL18-208ENST00000549920 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
RPL18-208ENST00000549920 NACADO15069 1562 aa36.57■■■■□ 3.44
RPL18-208ENST00000549920 DCAF8L2P0C7V8 631 aa36.37■■■■□ 3.41
RPL18-208ENST00000549920 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
RPL18-208ENST00000549920 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
RPL18-208ENST00000549920 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
RPL18-208ENST00000549920 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
RPL18-208ENST00000549920 ZCCHC6Q5VYS8 1495 aaKnown RBP35.86■■■■□ 3.33
RPL18-208ENST00000549920 BICRAQ9NZM4 1560 aa35.8■■■■□ 3.32
RPL18-208ENST00000549920 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
RPL18-208ENST00000549920 SCRIBQ14160 1630 aa35.3■■■■□ 3.24
RPL18-208ENST00000549920 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
RPL18-208ENST00000549920 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
RPL18-208ENST00000549920 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
RPL18-208ENST00000549920 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
RPL18-208ENST00000549920 NCAPD3P42695 1498 aa33.77■■■■□ 3
RPL18-208ENST00000549920 ATAD2BQ9ULI0 1458 aa33.7■■■□□ 2.99
RPL18-208ENST00000549920 SMARCA4P51532 1647 aa33.7■■■□□ 2.99
RPL18-208ENST00000549920 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
RPL18-208ENST00000549920 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
RPL18-208ENST00000549920 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
RPL18-208ENST00000549920 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
RPL18-208ENST00000549920 BAZ1BQ9UIG0 1483 aaKnown RBP33.34■■■□□ 2.93
RPL18-208ENST00000549920 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
RPL18-208ENST00000549920 ERCC6Q03468 1493 aa33.26■■■□□ 2.92
RPL18-208ENST00000549920 NESP48681 1621 aa33.24■■■□□ 2.91
RPL18-208ENST00000549920 CUX2O14529 1486 aa33.19■■■□□ 2.9
RPL18-208ENST00000549920 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
RPL18-208ENST00000549920 LAMC3Q9Y6N6 1575 aa32.97■■■□□ 2.87
RPL18-208ENST00000549920 WIZO95785 1651 aa32.95■■■□□ 2.87
RPL18-208ENST00000549920 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
RPL18-208ENST00000549920 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
RPL18-208ENST00000549920 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
RPL18-208ENST00000549920 CADPSQ9ULU8 1353 aa32.74■■■□□ 2.83
RPL18-208ENST00000549920 RSF1Q96T23 1441 aaPredicted RBP32.68■■■□□ 2.82
RPL18-208ENST00000549920 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
RPL18-208ENST00000549920 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
RPL18-208ENST00000549920 WDR62O43379 1518 aa32.43■■■□□ 2.78
RPL18-208ENST00000549920 CFTRP13569 1480 aa32.41■■■□□ 2.78
RPL18-208ENST00000549920 CEP164Q9UPV0 1460 aa32.37■■■□□ 2.77
RPL18-208ENST00000549920 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
RPL18-208ENST00000549920 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
RPL18-208ENST00000549920 URB2Q14146 1524 aaKnown RBP32.13■■■□□ 2.73
RPL18-208ENST00000549920 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
RPL18-208ENST00000549920 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
RPL18-208ENST00000549920 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
RPL18-208ENST00000549920 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
RPL18-208ENST00000549920 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
RPL18-208ENST00000549920 ABCC8Q09428 1581 aa31.67■■■□□ 2.66
RPL18-208ENST00000549920 DNMBPQ6XZF7 1577 aa31.67■■■□□ 2.66
RPL18-208ENST00000549920 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
RPL18-208ENST00000549920 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
RPL18-208ENST00000549920 EIF4G3O43432 1585 aaKnown RBP31.52■■■□□ 2.64
RPL18-208ENST00000549920 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
RPL18-208ENST00000549920 AQRO60306 1485 aaKnown RBP eCLIP31.44■■■□□ 2.625e-8■■■■■ 45.6
RPL18-208ENST00000549920 RAD54L2Q9Y4B4 1467 aa31.37■■■□□ 2.61
RPL18-208ENST00000549920 RIMBP3CA6NJZ7 1639 aa31.32■■■□□ 2.6
RPL18-208ENST00000549920 RIMBP3BA6NNM3 1639 aa31.32■■■□□ 2.6
RPL18-208ENST00000549920 RIMBP3Q9UFD9 1639 aa31.32■■■□□ 2.6
RPL18-208ENST00000549920 CUX1P39880 1505 aa31.3■■■□□ 2.6
RPL18-208ENST00000549920 SOGA1O94964 1423 aa31.3■■■□□ 2.6
RPL18-208ENST00000549920 CHD1O14646 1710 aa31.29■■■□□ 2.6
RPL18-208ENST00000549920 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
RPL18-208ENST00000549920 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
RPL18-208ENST00000549920 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
RPL18-208ENST00000549920 ARHGEF11O15085 1522 aa31.22■■■□□ 2.59
RPL18-208ENST00000549920 WDR97A6NE52 1622 aa31.14■■■□□ 2.58
RPL18-208ENST00000549920 FBLN2P98095 1184 aa31.13■■■□□ 2.57
RPL18-208ENST00000549920 SNAPC4Q5SXM2 1469 aa31.09■■■□□ 2.57
RPL18-208ENST00000549920 GRIN2BQ13224 1484 aa31.01■■■□□ 2.55
RPL18-208ENST00000549920 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
RPL18-208ENST00000549920 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
RPL18-208ENST00000549920 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
RPL18-208ENST00000549920 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
RPL18-208ENST00000549920 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
RPL18-208ENST00000549920 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
RPL18-208ENST00000549920 CLASP1Q7Z460 1538 aa30.93■■■□□ 2.54
RPL18-208ENST00000549920 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
RPL18-208ENST00000549920 ABCA5Q8WWZ7 1642 aa30.9■■■□□ 2.54
RPL18-208ENST00000549920 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
RPL18-208ENST00000549920 SYNJ1O43426 1573 aa30.87■■■□□ 2.53
RPL18-208ENST00000549920 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
RPL18-208ENST00000549920 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
RPL18-208ENST00000549920 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.521e-7■■■■■ 66.8
RPL18-208ENST00000549920 ADAMTS12P58397 1594 aa30.64■■■□□ 2.5
RPL18-208ENST00000549920 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
RPL18-208ENST00000549920 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
RPL18-208ENST00000549920 NUP160Q12769 1436 aa30.54■■■□□ 2.48
RPL18-208ENST00000549920 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
RPL18-208ENST00000549920 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
RPL18-208ENST00000549920 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
RPL18-208ENST00000549920 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
RPL18-208ENST00000549920 SHROOM2Q13796 1616 aa30.41■■■□□ 2.46
RPL18-208ENST00000549920 RUSC2Q8N2Y8 1516 aa30.21■■■□□ 2.43
RPL18-208ENST00000549920 PRG4Q92954 1404 aaPredicted RBP30.21■■■□□ 2.43
RPL18-208ENST00000549920 IGF1RP08069 1367 aa30.2■■■□□ 2.43
RPL18-208ENST00000549920 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms