RNA–Protein interactions for RNA: ENST00000586126.1

TMC6-205, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-205ENST00000586126 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
TMC6-205ENST00000586126 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
TMC6-205ENST00000586126 ABCC9O60706 1549 aa35.74■■■■□ 3.31
TMC6-205ENST00000586126 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
TMC6-205ENST00000586126 NACADO15069 1562 aa34.21■■■■□ 3.07
TMC6-205ENST00000586126 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
TMC6-205ENST00000586126 MYO15BQ96JP2 1530 aa33.98■■■■□ 3.03
TMC6-205ENST00000586126 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
TMC6-205ENST00000586126 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
TMC6-205ENST00000586126 UNC13AQ9UPW8 1703 aa33.41■■■□□ 2.94
TMC6-205ENST00000586126 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
TMC6-205ENST00000586126 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.92
TMC6-205ENST00000586126 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
TMC6-205ENST00000586126 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
TMC6-205ENST00000586126 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
TMC6-205ENST00000586126 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
TMC6-205ENST00000586126 CC2D2AQ9P2K1 1620 aa32.32■■■□□ 2.76
TMC6-205ENST00000586126 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
TMC6-205ENST00000586126 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
TMC6-205ENST00000586126 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
TMC6-205ENST00000586126 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
TMC6-205ENST00000586126 ATAD2BQ9ULI0 1458 aa31.55■■■□□ 2.64
TMC6-205ENST00000586126 SMARCA2P51531 1590 aa31.48■■■□□ 2.63
TMC6-205ENST00000586126 HMGXB3Q12766 1538 aa31.39■■■□□ 2.61
TMC6-205ENST00000586126 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
TMC6-205ENST00000586126 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
TMC6-205ENST00000586126 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
TMC6-205ENST00000586126 WIZO95785 1651 aa30.93■■■□□ 2.54
TMC6-205ENST00000586126 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
TMC6-205ENST00000586126 NESP48681 1621 aa30.85■■■□□ 2.53
TMC6-205ENST00000586126 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
TMC6-205ENST00000586126 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.52
TMC6-205ENST00000586126 CUX2O14529 1486 aa30.67■■■□□ 2.5
TMC6-205ENST00000586126 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
TMC6-205ENST00000586126 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
TMC6-205ENST00000586126 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
TMC6-205ENST00000586126 THOC2Q8NI27 1593 aaKnown RBP30.44■■■□□ 2.46
TMC6-205ENST00000586126 CFTRP13569 1480 aa30.42■■■□□ 2.46
TMC6-205ENST00000586126 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
TMC6-205ENST00000586126 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
TMC6-205ENST00000586126 MRC2Q9UBG0 1479 aa30.27■■■□□ 2.44
TMC6-205ENST00000586126 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
TMC6-205ENST00000586126 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
TMC6-205ENST00000586126 WDR62O43379 1518 aa30.18■■■□□ 2.42
TMC6-205ENST00000586126 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
TMC6-205ENST00000586126 PRDM2Q13029 1718 aa30.03■■■□□ 2.4
TMC6-205ENST00000586126 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
TMC6-205ENST00000586126 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
TMC6-205ENST00000586126 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
TMC6-205ENST00000586126 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
TMC6-205ENST00000586126 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
TMC6-205ENST00000586126 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
TMC6-205ENST00000586126 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.32
TMC6-205ENST00000586126 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
TMC6-205ENST00000586126 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
TMC6-205ENST00000586126 CUX1P39880 1505 aa29.41■■■□□ 2.3
TMC6-205ENST00000586126 SOGA1O94964 1423 aa29.37■■■□□ 2.29
TMC6-205ENST00000586126 OSCARQ8IYS5 282 aa29.36■■■□□ 2.29
TMC6-205ENST00000586126 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
TMC6-205ENST00000586126 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
TMC6-205ENST00000586126 RAD54L2Q9Y4B4 1467 aa29.34■■■□□ 2.29
TMC6-205ENST00000586126 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.282e-10■■■■■ 28.7
TMC6-205ENST00000586126 TDRD9Q8NDG6 1382 aaKnown RBP29.23■■■□□ 2.27
TMC6-205ENST00000586126 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
TMC6-205ENST00000586126 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
TMC6-205ENST00000586126 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
TMC6-205ENST00000586126 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
TMC6-205ENST00000586126 BIVM-ERCC5R4GMW8 1640 aa29.06■■■□□ 2.24
TMC6-205ENST00000586126 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
TMC6-205ENST00000586126 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
TMC6-205ENST00000586126 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
TMC6-205ENST00000586126 MAGI1Q96QZ7 1491 aaPredicted RBP29.02■■■□□ 2.24
TMC6-205ENST00000586126 GAPVD1Q14C86 1478 aa29.01■■■□□ 2.23
TMC6-205ENST00000586126 FBLN2P98095 1184 aa28.99■■■□□ 2.23
TMC6-205ENST00000586126 CHD1O14646 1710 aa28.99■■■□□ 2.23
TMC6-205ENST00000586126 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
TMC6-205ENST00000586126 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
TMC6-205ENST00000586126 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
TMC6-205ENST00000586126 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
TMC6-205ENST00000586126 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
TMC6-205ENST00000586126 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
TMC6-205ENST00000586126 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
TMC6-205ENST00000586126 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
TMC6-205ENST00000586126 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
TMC6-205ENST00000586126 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
TMC6-205ENST00000586126 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
TMC6-205ENST00000586126 ADAMTS12P58397 1594 aa28.7■■■□□ 2.18
TMC6-205ENST00000586126 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
TMC6-205ENST00000586126 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
TMC6-205ENST00000586126 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
TMC6-205ENST00000586126 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
TMC6-205ENST00000586126 NUP160Q12769 1436 aa28.59■■■□□ 2.17
TMC6-205ENST00000586126 KIF27Q86VH2 1401 aa28.56■■■□□ 2.16
TMC6-205ENST00000586126 IGF1RP08069 1367 aa28.51■■■□□ 2.16
TMC6-205ENST00000586126 CEP170Q5SW79 1584 aa28.51■■■□□ 2.15
TMC6-205ENST00000586126 CUL7Q14999 1698 aa28.37■■■□□ 2.13
TMC6-205ENST00000586126 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
TMC6-205ENST00000586126 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
TMC6-205ENST00000586126 ERCC6L2Q5T890 1561 aa28.3■■■□□ 2.12
TMC6-205ENST00000586126 JPH4Q96JJ6 628 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms