RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
EPHB4-201ENST00000358173 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
EPHB4-201ENST00000358173 SHROOM4Q9ULL8 1493 aa27.31■■□□□ 1.96
EPHB4-201ENST00000358173 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
EPHB4-201ENST00000358173 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
EPHB4-201ENST00000358173 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
EPHB4-201ENST00000358173 ABCC9O60706 1549 aa25.23■■□□□ 1.63
EPHB4-201ENST00000358173 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
EPHB4-201ENST00000358173 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
EPHB4-201ENST00000358173 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
EPHB4-201ENST00000358173 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
EPHB4-201ENST00000358173 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
EPHB4-201ENST00000358173 PABPN1Q86U42 306 aaKnown RBP eCLIP24.76■■□□□ 1.55
EPHB4-201ENST00000358173 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
EPHB4-201ENST00000358173 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
EPHB4-201ENST00000358173 APLP2Q06481 763 aa24.57■■□□□ 1.52
EPHB4-201ENST00000358173 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
EPHB4-201ENST00000358173 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
EPHB4-201ENST00000358173 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
EPHB4-201ENST00000358173 HRCP23327 699 aa24.41■■□□□ 1.5
EPHB4-201ENST00000358173 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
EPHB4-201ENST00000358173 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
EPHB4-201ENST00000358173 ZEB1P37275 1124 aaPredicted RBP24.17■■□□□ 1.46
EPHB4-201ENST00000358173 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
EPHB4-201ENST00000358173 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
EPHB4-201ENST00000358173 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
EPHB4-201ENST00000358173 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.38
EPHB4-201ENST00000358173 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
EPHB4-201ENST00000358173 ITGAEP38570 1179 aa23.63■■□□□ 1.37
EPHB4-201ENST00000358173 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
EPHB4-201ENST00000358173 NACADO15069 1562 aa23.58■■□□□ 1.37
EPHB4-201ENST00000358173 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
EPHB4-201ENST00000358173 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
EPHB4-201ENST00000358173 YTHDC1Q96MU7 727 aaKnown RBP23.52■■□□□ 1.36
EPHB4-201ENST00000358173 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
EPHB4-201ENST00000358173 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
EPHB4-201ENST00000358173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
EPHB4-201ENST00000358173 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
EPHB4-201ENST00000358173 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
EPHB4-201ENST00000358173 DIEXFQ68CQ4 756 aaKnown RBP23.13■■□□□ 1.29
EPHB4-201ENST00000358173 FBLN2P98095 1184 aa23.12■■□□□ 1.29
EPHB4-201ENST00000358173 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
EPHB4-201ENST00000358173 FAM50AQ14320 339 aaKnown RBP23.1■■□□□ 1.29
EPHB4-201ENST00000358173 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
EPHB4-201ENST00000358173 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
EPHB4-201ENST00000358173 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
EPHB4-201ENST00000358173 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
EPHB4-201ENST00000358173 MYT1LQ9UL68 1186 aa22.88■■□□□ 1.25
EPHB4-201ENST00000358173 GTF3C3Q9Y5Q9 886 aa22.85■■□□□ 1.25
EPHB4-201ENST00000358173 WIZO95785 1651 aa22.79■■□□□ 1.24
EPHB4-201ENST00000358173 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
EPHB4-201ENST00000358173 NEFLP07196 543 aa22.77■■□□□ 1.24
EPHB4-201ENST00000358173 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
EPHB4-201ENST00000358173 MYT1Q01538 1121 aa22.75■■□□□ 1.23
EPHB4-201ENST00000358173 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
EPHB4-201ENST00000358173 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
EPHB4-201ENST00000358173 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.22
EPHB4-201ENST00000358173 SOGA1O94964 1423 aa22.7■■□□□ 1.22
EPHB4-201ENST00000358173 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
EPHB4-201ENST00000358173 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
EPHB4-201ENST00000358173 CLIP1P30622 1438 aa22.67■■□□□ 1.22
EPHB4-201ENST00000358173 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
EPHB4-201ENST00000358173 ZNF316A6NFI3 1004 aaPredicted RBP22.65■■□□□ 1.22
EPHB4-201ENST00000358173 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.21
EPHB4-201ENST00000358173 EEA1Q15075 1411 aa22.59■■□□□ 1.21
EPHB4-201ENST00000358173 GOLGA3Q08378 1498 aa22.58■■□□□ 1.2
EPHB4-201ENST00000358173 ZNF777Q9ULD5 760 aaPredicted RBP22.53■■□□□ 1.2
EPHB4-201ENST00000358173 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
EPHB4-201ENST00000358173 TNIKQ9UKE5 1360 aa22.49■■□□□ 1.19
EPHB4-201ENST00000358173 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
EPHB4-201ENST00000358173 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
EPHB4-201ENST00000358173 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
EPHB4-201ENST00000358173 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
EPHB4-201ENST00000358173 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
EPHB4-201ENST00000358173 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
EPHB4-201ENST00000358173 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
EPHB4-201ENST00000358173 ZNF326Q5BKZ1 582 aaKnown RBP22.41■■□□□ 1.18
EPHB4-201ENST00000358173 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
EPHB4-201ENST00000358173 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
EPHB4-201ENST00000358173 CUX2O14529 1486 aa22.34■■□□□ 1.17
EPHB4-201ENST00000358173 MTUS2Q5JR59 1369 aa22.3■■□□□ 1.16
EPHB4-201ENST00000358173 BCANQ96GW7 911 aa22.29■■□□□ 1.16
EPHB4-201ENST00000358173 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
EPHB4-201ENST00000358173 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
EPHB4-201ENST00000358173 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
EPHB4-201ENST00000358173 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
EPHB4-201ENST00000358173 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
EPHB4-201ENST00000358173 MIER1Q8N108 512 aa22.15■■□□□ 1.14
EPHB4-201ENST00000358173 RRP7BPQ9NSQ0 103 aa22.12■■□□□ 1.13
EPHB4-201ENST00000358173 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
EPHB4-201ENST00000358173 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
EPHB4-201ENST00000358173 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
EPHB4-201ENST00000358173 ANP32CO43423 234 aa22.05■■□□□ 1.12
EPHB4-201ENST00000358173 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
EPHB4-201ENST00000358173 HIRIP3Q9BW71 556 aaPredicted RBP22.03■■□□□ 1.12
EPHB4-201ENST00000358173 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
EPHB4-201ENST00000358173 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
EPHB4-201ENST00000358173 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
EPHB4-201ENST00000358173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.98■■□□□ 1.114e-6■□□□□ 11.1
EPHB4-201ENST00000358173 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms