RNA–Protein interactions for RNA: ENST00000568631.5

RNPS1-223, Transcript of RNA binding protein with serine rich domain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNPS1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-223ENST00000568631 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
RNPS1-223ENST00000568631 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
RNPS1-223ENST00000568631 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
RNPS1-223ENST00000568631 ABCC9O60706 1549 aa31.4■■■□□ 2.62
RNPS1-223ENST00000568631 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
RNPS1-223ENST00000568631 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
RNPS1-223ENST00000568631 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
RNPS1-223ENST00000568631 NACADO15069 1562 aa30.75■■■□□ 2.51
RNPS1-223ENST00000568631 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.49
RNPS1-223ENST00000568631 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
RNPS1-223ENST00000568631 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
RNPS1-223ENST00000568631 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
RNPS1-223ENST00000568631 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
RNPS1-223ENST00000568631 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
RNPS1-223ENST00000568631 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
RNPS1-223ENST00000568631 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
RNPS1-223ENST00000568631 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
RNPS1-223ENST00000568631 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
RNPS1-223ENST00000568631 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
RNPS1-223ENST00000568631 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
RNPS1-223ENST00000568631 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
RNPS1-223ENST00000568631 WIZO95785 1651 aa28.63■■■□□ 2.17
RNPS1-223ENST00000568631 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
RNPS1-223ENST00000568631 SMARCA2P51531 1590 aa28.53■■■□□ 2.16
RNPS1-223ENST00000568631 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
RNPS1-223ENST00000568631 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
RNPS1-223ENST00000568631 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
RNPS1-223ENST00000568631 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
RNPS1-223ENST00000568631 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
RNPS1-223ENST00000568631 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
RNPS1-223ENST00000568631 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
RNPS1-223ENST00000568631 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.08
RNPS1-223ENST00000568631 CFTRP13569 1480 aa27.62■■■□□ 2.01
RNPS1-223ENST00000568631 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
RNPS1-223ENST00000568631 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
RNPS1-223ENST00000568631 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
RNPS1-223ENST00000568631 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
RNPS1-223ENST00000568631 NESP48681 1621 aa27.42■■□□□ 1.98
RNPS1-223ENST00000568631 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
RNPS1-223ENST00000568631 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
RNPS1-223ENST00000568631 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
RNPS1-223ENST00000568631 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
RNPS1-223ENST00000568631 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
RNPS1-223ENST00000568631 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
RNPS1-223ENST00000568631 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
RNPS1-223ENST00000568631 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
RNPS1-223ENST00000568631 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
RNPS1-223ENST00000568631 CUX1P39880 1505 aa27.06■■□□□ 1.92
RNPS1-223ENST00000568631 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
RNPS1-223ENST00000568631 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
RNPS1-223ENST00000568631 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
RNPS1-223ENST00000568631 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.9
RNPS1-223ENST00000568631 TOPBP1Q92547 1522 aa26.95■■□□□ 1.9
RNPS1-223ENST00000568631 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
RNPS1-223ENST00000568631 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
RNPS1-223ENST00000568631 WDR62O43379 1518 aa26.81■■□□□ 1.88
RNPS1-223ENST00000568631 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
RNPS1-223ENST00000568631 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
RNPS1-223ENST00000568631 SOGA1O94964 1423 aa26.73■■□□□ 1.87
RNPS1-223ENST00000568631 EEA1Q15075 1411 aa26.7■■□□□ 1.86
RNPS1-223ENST00000568631 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
RNPS1-223ENST00000568631 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
RNPS1-223ENST00000568631 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
RNPS1-223ENST00000568631 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
RNPS1-223ENST00000568631 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
RNPS1-223ENST00000568631 CUX2O14529 1486 aa26.61■■□□□ 1.85
RNPS1-223ENST00000568631 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
RNPS1-223ENST00000568631 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
RNPS1-223ENST00000568631 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
RNPS1-223ENST00000568631 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
RNPS1-223ENST00000568631 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
RNPS1-223ENST00000568631 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
RNPS1-223ENST00000568631 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
RNPS1-223ENST00000568631 IGF1RP08069 1367 aa26.4■■□□□ 1.82
RNPS1-223ENST00000568631 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
RNPS1-223ENST00000568631 LOC105371045A0A1W2PR82 267 aa26.36■■□□□ 1.81
RNPS1-223ENST00000568631 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.813e-7■■■■□ 22.2
RNPS1-223ENST00000568631 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
RNPS1-223ENST00000568631 KIF21BO75037 1637 aa26.32■■□□□ 1.8
RNPS1-223ENST00000568631 PRXQ9BXM0 1461 aa26.31■■□□□ 1.8
RNPS1-223ENST00000568631 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
RNPS1-223ENST00000568631 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
RNPS1-223ENST00000568631 GOLGA3Q08378 1498 aa26.26■■□□□ 1.8
RNPS1-223ENST00000568631 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
RNPS1-223ENST00000568631 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
RNPS1-223ENST00000568631 CUL7Q14999 1698 aa26.24■■□□□ 1.79
RNPS1-223ENST00000568631 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
RNPS1-223ENST00000568631 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
RNPS1-223ENST00000568631 UBTFP17480 764 aaKnown RBP26.16■■□□□ 1.78
RNPS1-223ENST00000568631 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
RNPS1-223ENST00000568631 TNIKQ9UKE5 1360 aa26.12■■□□□ 1.77
RNPS1-223ENST00000568631 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
RNPS1-223ENST00000568631 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
RNPS1-223ENST00000568631 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
RNPS1-223ENST00000568631 SYNJ2O15056 1496 aa26■■□□□ 1.75
RNPS1-223ENST00000568631 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
RNPS1-223ENST00000568631 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
RNPS1-223ENST00000568631 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
RNPS1-223ENST00000568631 FBLN2P98095 1184 aa25.9■■□□□ 1.74
RNPS1-223ENST00000568631 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms