RNA–Protein interactions for RNA: ENST00000569997.1

COX4I1-217, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

Gene COX4I1, Length 3,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-217ENST00000569997 NISCHQ9Y2I1 1504 aa18.97■□□□□ 0.63
COX4I1-217ENST00000569997 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
COX4I1-217ENST00000569997 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
COX4I1-217ENST00000569997 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
COX4I1-217ENST00000569997 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
COX4I1-217ENST00000569997 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
COX4I1-217ENST00000569997 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
COX4I1-217ENST00000569997 DCAF1Q9Y4B6 1507 aa15.42■□□□□ 0.06
COX4I1-217ENST00000569997 ABCC9O60706 1549 aa15.4■□□□□ 0.06
COX4I1-217ENST00000569997 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
COX4I1-217ENST00000569997 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
COX4I1-217ENST00000569997 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
COX4I1-217ENST00000569997 PCGF6Q9BYE7 350 aa15.22■□□□□ 0.03
COX4I1-217ENST00000569997 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
COX4I1-217ENST00000569997 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
COX4I1-217ENST00000569997 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
COX4I1-217ENST00000569997 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
COX4I1-217ENST00000569997 NACADO15069 1562 aa15.03■□□□□ -0
COX4I1-217ENST00000569997 HRCP23327 699 aa14.93□□□□□ -0.02
COX4I1-217ENST00000569997 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
COX4I1-217ENST00000569997 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
COX4I1-217ENST00000569997 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
COX4I1-217ENST00000569997 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
COX4I1-217ENST00000569997 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
COX4I1-217ENST00000569997 UBTFP17480 764 aaKnown RBP14.7□□□□□ -0.06
COX4I1-217ENST00000569997 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
COX4I1-217ENST00000569997 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
COX4I1-217ENST00000569997 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
COX4I1-217ENST00000569997 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
COX4I1-217ENST00000569997 APLP2Q06481 763 aa14.57□□□□□ -0.08
COX4I1-217ENST00000569997 WIZO95785 1651 aa14.56□□□□□ -0.08
COX4I1-217ENST00000569997 RANGAP1P46060 587 aaPredicted RBP14.52□□□□□ -0.08
COX4I1-217ENST00000569997 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
COX4I1-217ENST00000569997 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
COX4I1-217ENST00000569997 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
COX4I1-217ENST00000569997 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
COX4I1-217ENST00000569997 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
COX4I1-217ENST00000569997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
COX4I1-217ENST00000569997 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
COX4I1-217ENST00000569997 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
COX4I1-217ENST00000569997 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
COX4I1-217ENST00000569997 EEA1Q15075 1411 aa14.31□□□□□ -0.12
COX4I1-217ENST00000569997 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
COX4I1-217ENST00000569997 SOGA1O94964 1423 aa14.27□□□□□ -0.12
COX4I1-217ENST00000569997 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
COX4I1-217ENST00000569997 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
COX4I1-217ENST00000569997 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
COX4I1-217ENST00000569997 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
COX4I1-217ENST00000569997 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
COX4I1-217ENST00000569997 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
COX4I1-217ENST00000569997 ATP1B4Q9UN42 357 aaPredicted RBP14.13□□□□□ -0.15
COX4I1-217ENST00000569997 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
COX4I1-217ENST00000569997 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
COX4I1-217ENST00000569997 CLIP1P30622 1438 aa14.11□□□□□ -0.15
COX4I1-217ENST00000569997 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
COX4I1-217ENST00000569997 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
COX4I1-217ENST00000569997 ITGAEP38570 1179 aa14.02□□□□□ -0.17
COX4I1-217ENST00000569997 CENPBP07199 599 aaPredicted RBP14□□□□□ -0.17
COX4I1-217ENST00000569997 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
COX4I1-217ENST00000569997 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
COX4I1-217ENST00000569997 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
COX4I1-217ENST00000569997 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
COX4I1-217ENST00000569997 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
COX4I1-217ENST00000569997 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
COX4I1-217ENST00000569997 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
COX4I1-217ENST00000569997 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
COX4I1-217ENST00000569997 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
COX4I1-217ENST00000569997 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
COX4I1-217ENST00000569997 MYT1Q01538 1121 aa13.88□□□□□ -0.19
COX4I1-217ENST00000569997 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
COX4I1-217ENST00000569997 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
COX4I1-217ENST00000569997 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
COX4I1-217ENST00000569997 CUX2O14529 1486 aa13.83□□□□□ -0.2
COX4I1-217ENST00000569997 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
COX4I1-217ENST00000569997 KIF21BO75037 1637 aa13.8□□□□□ -0.2
COX4I1-217ENST00000569997 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
COX4I1-217ENST00000569997 TOP2BQ02880 1626 aa13.77□□□□□ -0.2
COX4I1-217ENST00000569997 CFTRP13569 1480 aa13.77□□□□□ -0.2
COX4I1-217ENST00000569997 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
COX4I1-217ENST00000569997 CUX1P39880 1505 aa13.7□□□□□ -0.22
COX4I1-217ENST00000569997 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
COX4I1-217ENST00000569997 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
COX4I1-217ENST00000569997 IGF1RP08069 1367 aa13.68□□□□□ -0.22
COX4I1-217ENST00000569997 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
COX4I1-217ENST00000569997 NEUROD1Q13562 356 aa13.67□□□□□ -0.22
COX4I1-217ENST00000569997 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
COX4I1-217ENST00000569997 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
COX4I1-217ENST00000569997 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
COX4I1-217ENST00000569997 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
COX4I1-217ENST00000569997 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
COX4I1-217ENST00000569997 GTF3C3Q9Y5Q9 886 aa13.6□□□□□ -0.23
COX4I1-217ENST00000569997 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
COX4I1-217ENST00000569997 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
COX4I1-217ENST00000569997 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
COX4I1-217ENST00000569997 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
COX4I1-217ENST00000569997 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.23
COX4I1-217ENST00000569997 MIER1Q8N108 512 aa13.57□□□□□ -0.24
COX4I1-217ENST00000569997 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
COX4I1-217ENST00000569997 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
COX4I1-217ENST00000569997 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 483.2 ms