RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 NISCHQ9Y2I1 1504 aa22.05■■□□□ 1.12
EPHB4-202ENST00000360620 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.84
EPHB4-202ENST00000360620 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
EPHB4-202ENST00000360620 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
EPHB4-202ENST00000360620 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
EPHB4-202ENST00000360620 HRCP23327 699 aa19.32■□□□□ 0.68
EPHB4-202ENST00000360620 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
EPHB4-202ENST00000360620 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
EPHB4-202ENST00000360620 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
EPHB4-202ENST00000360620 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
EPHB4-202ENST00000360620 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
EPHB4-202ENST00000360620 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
EPHB4-202ENST00000360620 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-202ENST00000360620 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
EPHB4-202ENST00000360620 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
EPHB4-202ENST00000360620 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
EPHB4-202ENST00000360620 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
EPHB4-202ENST00000360620 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
EPHB4-202ENST00000360620 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
EPHB4-202ENST00000360620 ABCC9O60706 1549 aa18.49■□□□□ 0.55
EPHB4-202ENST00000360620 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
EPHB4-202ENST00000360620 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-202ENST00000360620 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
EPHB4-202ENST00000360620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
EPHB4-202ENST00000360620 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
EPHB4-202ENST00000360620 APLP2Q06481 763 aa18.1■□□□□ 0.49
EPHB4-202ENST00000360620 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
EPHB4-202ENST00000360620 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
EPHB4-202ENST00000360620 MYT1Q01538 1121 aa18.04■□□□□ 0.48
EPHB4-202ENST00000360620 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
EPHB4-202ENST00000360620 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
EPHB4-202ENST00000360620 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
EPHB4-202ENST00000360620 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
EPHB4-202ENST00000360620 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
EPHB4-202ENST00000360620 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
EPHB4-202ENST00000360620 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
EPHB4-202ENST00000360620 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
EPHB4-202ENST00000360620 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
EPHB4-202ENST00000360620 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.41
EPHB4-202ENST00000360620 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
EPHB4-202ENST00000360620 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
EPHB4-202ENST00000360620 ITGAEP38570 1179 aa17.44■□□□□ 0.38
EPHB4-202ENST00000360620 NEFLP07196 543 aa17.44■□□□□ 0.38
EPHB4-202ENST00000360620 MIER1Q8N108 512 aa17.36■□□□□ 0.37
EPHB4-202ENST00000360620 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
EPHB4-202ENST00000360620 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
EPHB4-202ENST00000360620 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
EPHB4-202ENST00000360620 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
EPHB4-202ENST00000360620 NACADO15069 1562 aa17.29■□□□□ 0.36
EPHB4-202ENST00000360620 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
EPHB4-202ENST00000360620 BCANQ96GW7 911 aa17.24■□□□□ 0.35
EPHB4-202ENST00000360620 WIZO95785 1651 aa17.15■□□□□ 0.34
EPHB4-202ENST00000360620 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
EPHB4-202ENST00000360620 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
EPHB4-202ENST00000360620 CLIP1P30622 1438 aa17.06■□□□□ 0.32
EPHB4-202ENST00000360620 EEA1Q15075 1411 aa17.06■□□□□ 0.32
EPHB4-202ENST00000360620 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
EPHB4-202ENST00000360620 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
EPHB4-202ENST00000360620 SOGA1O94964 1423 aa17.03■□□□□ 0.32
EPHB4-202ENST00000360620 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
EPHB4-202ENST00000360620 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
EPHB4-202ENST00000360620 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
EPHB4-202ENST00000360620 FKBP8Q14318 412 aa16.98■□□□□ 0.31
EPHB4-202ENST00000360620 ANP32CO43423 234 aa16.96■□□□□ 0.3
EPHB4-202ENST00000360620 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
EPHB4-202ENST00000360620 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
EPHB4-202ENST00000360620 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
EPHB4-202ENST00000360620 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
EPHB4-202ENST00000360620 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
EPHB4-202ENST00000360620 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
EPHB4-202ENST00000360620 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
EPHB4-202ENST00000360620 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
EPHB4-202ENST00000360620 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
EPHB4-202ENST00000360620 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
EPHB4-202ENST00000360620 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
EPHB4-202ENST00000360620 ANP32EQ9BTT0 268 aa16.79■□□□□ 0.28
EPHB4-202ENST00000360620 BICRAQ9NZM4 1560 aa16.79■□□□□ 0.28
EPHB4-202ENST00000360620 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.28
EPHB4-202ENST00000360620 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.27
EPHB4-202ENST00000360620 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.27
EPHB4-202ENST00000360620 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.27
EPHB4-202ENST00000360620 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-202ENST00000360620 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
EPHB4-202ENST00000360620 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
EPHB4-202ENST00000360620 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
EPHB4-202ENST00000360620 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
EPHB4-202ENST00000360620 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
EPHB4-202ENST00000360620 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
EPHB4-202ENST00000360620 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.26
EPHB4-202ENST00000360620 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
EPHB4-202ENST00000360620 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
EPHB4-202ENST00000360620 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
EPHB4-202ENST00000360620 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
EPHB4-202ENST00000360620 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
EPHB4-202ENST00000360620 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.25
EPHB4-202ENST00000360620 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
EPHB4-202ENST00000360620 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
EPHB4-202ENST00000360620 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
EPHB4-202ENST00000360620 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
EPHB4-202ENST00000360620 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms