Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
PPP4R2Q9NY27 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC33.34■■■□□ 2.93
PPP4R2Q9NY27 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33.34■■■□□ 2.93
PPP4R2Q9NY27 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.34■■■□□ 2.93
PPP4R2Q9NY27 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC33.33■■■□□ 2.93
PPP4R2Q9NY27 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
PPP4R2Q9NY27 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
PPP4R2Q9NY27 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
PPP4R2Q9NY27 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC33.32■■■□□ 2.92
PPP4R2Q9NY27 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC33.31■■■□□ 2.92
PPP4R2Q9NY27 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.3■■■□□ 2.92
PPP4R2Q9NY27 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PPP4R2Q9NY27 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC33.3■■■□□ 2.92
PPP4R2Q9NY27 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PPP4R2Q9NY27 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
PPP4R2Q9NY27 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
PPP4R2Q9NY27 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
PPP4R2Q9NY27 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
PPP4R2Q9NY27 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
PPP4R2Q9NY27 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.27■■■□□ 2.92
PPP4R2Q9NY27 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
PPP4R2Q9NY27 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
PPP4R2Q9NY27 AC010864.1-201ENST00000609407 1511 ntBASIC33.27■■■□□ 2.92
PPP4R2Q9NY27 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
PPP4R2Q9NY27 SHF-208ENST00000560734 1731 ntTSL 3 BASIC33.26■■■□□ 2.92
PPP4R2Q9NY27 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.26■■■□□ 2.91
PPP4R2Q9NY27 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC33.25■■■□□ 2.91
PPP4R2Q9NY27 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC33.25■■■□□ 2.91
PPP4R2Q9NY27 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
PPP4R2Q9NY27 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
PPP4R2Q9NY27 WASH5P-204ENST00000632292 975 ntBASIC33.24■■■□□ 2.91
PPP4R2Q9NY27 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
PPP4R2Q9NY27 PROC-203ENST00000409048 1586 ntTSL 5 BASIC33.22■■■□□ 2.91
PPP4R2Q9NY27 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
PPP4R2Q9NY27 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.21■■■□□ 2.91
PPP4R2Q9NY27 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.9
PPP4R2Q9NY27 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
PPP4R2Q9NY27 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
PPP4R2Q9NY27 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PPP4R2Q9NY27 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.18■■■□□ 2.9
PPP4R2Q9NY27 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPP4R2Q9NY27 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC33.17■■■□□ 2.9
PPP4R2Q9NY27 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
PPP4R2Q9NY27 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
PPP4R2Q9NY27 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
PPP4R2Q9NY27 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPP4R2Q9NY27 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.16■■■□□ 2.9
PPP4R2Q9NY27 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PPP4R2Q9NY27 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
PPP4R2Q9NY27 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC33.15■■■□□ 2.9
PPP4R2Q9NY27 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
PPP4R2Q9NY27 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PPP4R2Q9NY27 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PPP4R2Q9NY27 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
PPP4R2Q9NY27 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
PPP4R2Q9NY27 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PPP4R2Q9NY27 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PPP4R2Q9NY27 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC33.13■■■□□ 2.89
PPP4R2Q9NY27 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC33.13■■■□□ 2.89
PPP4R2Q9NY27 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC33.12■■■□□ 2.89
PPP4R2Q9NY27 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
PPP4R2Q9NY27 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC33.11■■■□□ 2.89
PPP4R2Q9NY27 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
PPP4R2Q9NY27 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
PPP4R2Q9NY27 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
PPP4R2Q9NY27 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
PPP4R2Q9NY27 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
PPP4R2Q9NY27 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
PPP4R2Q9NY27 AL449106.1-201ENST00000608517 1980 ntBASIC33.09■■■□□ 2.89
PPP4R2Q9NY27 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PPP4R2Q9NY27 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
PPP4R2Q9NY27 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC33.08■■■□□ 2.89
PPP4R2Q9NY27 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC33.07■■■□□ 2.88
PPP4R2Q9NY27 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.07■■■□□ 2.88
PPP4R2Q9NY27 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC33.07■■■□□ 2.88
PPP4R2Q9NY27 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PPP4R2Q9NY27 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC33.06■■■□□ 2.88
PPP4R2Q9NY27 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
PPP4R2Q9NY27 LINC01003-201ENST00000564834 1764 ntBASIC33.06■■■□□ 2.88
PPP4R2Q9NY27 AP004833.2-201ENST00000532228 1454 ntBASIC33.05■■■□□ 2.88
PPP4R2Q9NY27 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
PPP4R2Q9NY27 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
PPP4R2Q9NY27 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.03■■■□□ 2.88
PPP4R2Q9NY27 PKM-203ENST00000389093 2279 ntTSL 5 BASIC33.03■■■□□ 2.88
PPP4R2Q9NY27 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC33.02■■■□□ 2.88
PPP4R2Q9NY27 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
PPP4R2Q9NY27 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PPP4R2Q9NY27 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
PPP4R2Q9NY27 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC33.01■■■□□ 2.87
PPP4R2Q9NY27 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
PPP4R2Q9NY27 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
PPP4R2Q9NY27 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
PPP4R2Q9NY27 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PPP4R2Q9NY27 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PPP4R2Q9NY27 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
PPP4R2Q9NY27 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PPP4R2Q9NY27 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.95■■■□□ 2.87
PPP4R2Q9NY27 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.95■■■□□ 2.87
PPP4R2Q9NY27 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
PPP4R2Q9NY27 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms