RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 NISCHQ9Y2I1 1504 aa43.85■■■■■ 4.61
CCM2L-201ENST00000262659 HRCP23327 699 aa40.71■■■■■ 4.11
CCM2L-201ENST00000262659 PELP1Q8IZL8 1130 aaKnown RBP39.97■■■■□ 3.99
CCM2L-201ENST00000262659 PPARGC1BQ86YN6 1023 aaKnown RBP39.89■■■■□ 3.98
CCM2L-201ENST00000262659 PCGF6Q9BYE7 350 aa39.62■■■■□ 3.93
CCM2L-201ENST00000262659 MYO15BQ96JP2 1530 aa39.2■■■■□ 3.87
CCM2L-201ENST00000262659 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
CCM2L-201ENST00000262659 SHROOM4Q9ULL8 1493 aa39.11■■■■□ 3.85
CCM2L-201ENST00000262659 SCAF1Q9H7N4 1312 aaKnown RBP38.84■■■■□ 3.81
CCM2L-201ENST00000262659 CHIC1Q5VXU3 224 aa38.76■■■■□ 3.8
CCM2L-201ENST00000262659 MYT1Q01538 1121 aa38.53■■■■□ 3.76
CCM2L-201ENST00000262659 DCAF1Q9Y4B6 1507 aa38.44■■■■□ 3.74
CCM2L-201ENST00000262659 TRIM26Q12899 539 aaPredicted RBP38.18■■■■□ 3.7
CCM2L-201ENST00000262659 CCDC180Q9P1Z9 1646 aa38.07■■■■□ 3.68
CCM2L-201ENST00000262659 ZEB1P37275 1124 aaPredicted RBP38■■■■□ 3.67
CCM2L-201ENST00000262659 LOC105371045A0A1W2PR82 267 aa37.95■■■■□ 3.67
CCM2L-201ENST00000262659 ACIN1Q9UKV3 1341 aaKnown RBP37.69■■■■□ 3.62
CCM2L-201ENST00000262659 NEUROD1Q13562 356 aa37.58■■■■□ 3.61
CCM2L-201ENST00000262659 GTF3C3Q9Y5Q9 886 aa37.42■■■■□ 3.58
CCM2L-201ENST00000262659 ZCCHC6Q5VYS8 1495 aaKnown RBP37.19■■■■□ 3.54
CCM2L-201ENST00000262659 CENPBP07199 599 aaPredicted RBP37.07■■■■□ 3.52
CCM2L-201ENST00000262659 DIEXFQ68CQ4 756 aaKnown RBP36.76■■■■□ 3.47
CCM2L-201ENST00000262659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.54■■■■□ 3.44
CCM2L-201ENST00000262659 CCER1Q8TC90 406 aaPredicted RBP36.45■■■■□ 3.43
CCM2L-201ENST00000262659 DCAF8L2P0C7V8 631 aa36.43■■■■□ 3.42
CCM2L-201ENST00000262659 TTBK1Q5TCY1 1321 aaPredicted RBP36.27■■■■□ 3.4
CCM2L-201ENST00000262659 FAM9AQ8IZU1 332 aaPredicted RBP36.23■■■■□ 3.39
CCM2L-201ENST00000262659 YTHDC1Q96MU7 727 aaKnown RBP36.23■■■■□ 3.39
CCM2L-201ENST00000262659 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
CCM2L-201ENST00000262659 EHMT2Q96KQ7 1210 aa36.12■■■■□ 3.37
CCM2L-201ENST00000262659 BCL11AQ9H165 835 aa36.11■■■■□ 3.37
CCM2L-201ENST00000262659 ZNF316A6NFI3 1004 aaPredicted RBP35.91■■■■□ 3.34
CCM2L-201ENST00000262659 ANP32EQ9BTT0 268 aa35.81■■■■□ 3.32
CCM2L-201ENST00000262659 MIER1Q8N108 512 aa35.79■■■■□ 3.32
CCM2L-201ENST00000262659 TSHZ2Q9NRE2 1034 aa35.49■■■■□ 3.27
CCM2L-201ENST00000262659 SUPT16HQ9Y5B9 1047 aaKnown RBP35.49■■■■□ 3.27
CCM2L-201ENST00000262659 CSRNP3Q8WYN3 585 aa35.47■■■■□ 3.27
CCM2L-201ENST00000262659 ABCC9O60706 1549 aa35.45■■■■□ 3.27
CCM2L-201ENST00000262659 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
CCM2L-201ENST00000262659 RB1CC1Q8TDY2 1594 aa35.32■■■■□ 3.24
CCM2L-201ENST00000262659 CLSPNQ9HAW4 1339 aa35.31■■■■□ 3.24
CCM2L-201ENST00000262659 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.2
CCM2L-201ENST00000262659 PRKCSHP14314 528 aaPredicted RBP34.97■■■■□ 3.19
CCM2L-201ENST00000262659 SCRIBQ14160 1630 aa34.87■■■■□ 3.17
CCM2L-201ENST00000262659 CEP162Q5TB80 1403 aa34.75■■■■□ 3.15
CCM2L-201ENST00000262659 HNRNPUL2Q1KMD3 747 aaKnown RBP34.68■■■■□ 3.14
CCM2L-201ENST00000262659 BCANQ96GW7 911 aa34.65■■■■□ 3.14
CCM2L-201ENST00000262659 RBM19Q9Y4C8 960 aaKnown RBP34.59■■■■□ 3.13
CCM2L-201ENST00000262659 TNIKQ9UKE5 1360 aa34.44■■■■□ 3.1
CCM2L-201ENST00000262659 FKBP8Q14318 412 aa34.42■■■■□ 3.1
CCM2L-201ENST00000262659 MSH5O43196 834 aa34.38■■■■□ 3.09
CCM2L-201ENST00000262659 KCNH8Q96L42 1107 aa34.33■■■■□ 3.09
CCM2L-201ENST00000262659 CECR2Q9BXF3 1484 aa34.29■■■■□ 3.08
CCM2L-201ENST00000262659 UBTFP17480 764 aaKnown RBP34.23■■■■□ 3.07
CCM2L-201ENST00000262659 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
CCM2L-201ENST00000262659 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
CCM2L-201ENST00000262659 ABCC8Q09428 1581 aa34.2■■■■□ 3.07
CCM2L-201ENST00000262659 MROH2BQ7Z745 1585 aa34.2■■■■□ 3.07
CCM2L-201ENST00000262659 SOGA1O94964 1423 aa34.16■■■■□ 3.06
CCM2L-201ENST00000262659 ITGAEP38570 1179 aa34.15■■■■□ 3.06
CCM2L-201ENST00000262659 ERICH6Q7L0X2 663 aa34.12■■■■□ 3.05
CCM2L-201ENST00000262659 WIZO95785 1651 aa34.09■■■■□ 3.05
CCM2L-201ENST00000262659 DHX57Q6P158 1386 aaKnown RBP34.04■■■■□ 3.04
CCM2L-201ENST00000262659 NEFLP07196 543 aa34.04■■■■□ 3.04
CCM2L-201ENST00000262659 NACADO15069 1562 aa33.99■■■■□ 3.03
CCM2L-201ENST00000262659 FANCIQ9NVI1 1328 aa33.97■■■■□ 3.03
CCM2L-201ENST00000262659 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
CCM2L-201ENST00000262659 GOLGA3Q08378 1498 aa33.91■■■■□ 3.02
CCM2L-201ENST00000262659 DEKP35659 375 aaKnown RBP33.88■■■■□ 3.01
CCM2L-201ENST00000262659 EEA1Q15075 1411 aa33.86■■■■□ 3.01
CCM2L-201ENST00000262659 ANO8Q9HCE9 1232 aaPredicted RBP33.85■■■■□ 3.01
CCM2L-201ENST00000262659 MYT1LQ9UL68 1186 aa33.82■■■■□ 3
CCM2L-201ENST00000262659 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
CCM2L-201ENST00000262659 APLP2Q06481 763 aa33.76■■■□□ 2.99
CCM2L-201ENST00000262659 CLIP1P30622 1438 aa33.75■■■□□ 2.99
CCM2L-201ENST00000262659 VPS8Q8N3P4 1428 aa33.72■■■□□ 2.99
CCM2L-201ENST00000262659 TRIM52Q96A61 297 aa33.71■■■□□ 2.99
CCM2L-201ENST00000262659 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
CCM2L-201ENST00000262659 DDX10Q13206 875 aaKnown RBP33.63■■■□□ 2.97
CCM2L-201ENST00000262659 SALL2Q9Y467 1007 aaPredicted RBP33.5■■■□□ 2.95
CCM2L-201ENST00000262659 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
CCM2L-201ENST00000262659 IRX6P78412 446 aaPredicted RBP33.42■■■□□ 2.94
CCM2L-201ENST00000262659 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
CCM2L-201ENST00000262659 CCER2I3L3R5 266 aa33.41■■■□□ 2.94
CCM2L-201ENST00000262659 PPP1R15AO75807 674 aaPredicted RBP33.41■■■□□ 2.94
CCM2L-201ENST00000262659 RANGAP1P46060 587 aaPredicted RBP33.39■■■□□ 2.94
CCM2L-201ENST00000262659 KIF21BO75037 1637 aa33.38■■■□□ 2.93
CCM2L-201ENST00000262659 NBR1Q14596 966 aa33.37■■■□□ 2.93
CCM2L-201ENST00000262659 ERICH6BQ5W0A0 696 aa33.36■■■□□ 2.93
CCM2L-201ENST00000262659 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
CCM2L-201ENST00000262659 ANP32CO43423 234 aa33.29■■■□□ 2.92
CCM2L-201ENST00000262659 CCDC136Q96JN2 1154 aa33.28■■■□□ 2.92
CCM2L-201ENST00000262659 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
CCM2L-201ENST00000262659 CUX2O14529 1486 aa33.26■■■□□ 2.92
CCM2L-201ENST00000262659 NOP58Q9Y2X3 529 aaKnown RBP33.25■■■□□ 2.91
CCM2L-201ENST00000262659 KANK4Q5T7N3 995 aaPredicted RBP33.23■■■□□ 2.91
CCM2L-201ENST00000262659 WDR97A6NE52 1622 aa33.22■■■□□ 2.91
CCM2L-201ENST00000262659 PAK3O75914 559 aaPredicted RBP33.21■■■□□ 2.91
CCM2L-201ENST00000262659 MAPKBP1O60336 1514 aa33.2■■■□□ 2.91
CCM2L-201ENST00000262659 BAZ1BQ9UIG0 1483 aaKnown RBP33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms