Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RPL9-202ENST00000437992 579 ntTSL 44.98□□□□□ -1.613e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-204ENST00000503040 571 ntTSL 44.02□□□□□ -1.773e-6■■■■□ 23.5
XRN2Q9H0D6 RPL9-208ENST00000508595 667 ntTSL 33.98□□□□□ -1.773e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.53□□□□□ -1.843e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-208ENST00000519760 276 ntTSL 33.16□□□□□ -1.93e-6■■■■□ 23.5
XRN2Q9H0D6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.02□□□□□ -1.933e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-207ENST00000585828 2139 ntTSL 1 (best)15.92■□□□□ 0.145e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.125e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.78□□□□□ -0.045e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.23□□□□□ -0.135e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-209ENST00000586201 881 ntTSL 314.14□□□□□ -0.155e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-219ENST00000588806 842 ntTSL 213.6□□□□□ -0.235e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-217ENST00000588138 573 ntTSL 513.07□□□□□ -0.325e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC11.28□□□□□ -0.65e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.785e-6■■■■□ 23.5
XRN2Q9H0D6 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.835e-6■■■■□ 23.5
XRN2Q9H0D6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.3■□□□□ 0.844e-6■■■■□ 23.5
XRN2Q9H0D6 ADAP1-209ENST00000463358 595 ntTSL 317.63■□□□□ 0.414e-6■■■■□ 23.5
XRN2Q9H0D6 ADAP1-208ENST00000454383 576 ntTSL 414.77□□□□□ -0.054e-6■■■■□ 23.5
XRN2Q9H0D6 ZBTB7B-204ENST00000461530 658 ntTSL 423.69■■□□□ 1.382e-6■■■■□ 23.5
XRN2Q9H0D6 ZBTB7B-205ENST00000483226 243 ntTSL 320.51■□□□□ 0.872e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-215ENST00000602164 582 ntTSL 331.33■■■□□ 2.614e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-204ENST00000525699 516 ntTSL 530.66■■■□□ 2.57e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-214ENST00000533998 581 ntTSL 329.98■■■□□ 2.397e-6■■■■□ 23.5
XRN2Q9H0D6 ARID3A-204ENST00000585895 377 ntTSL 229.75■■■□□ 2.352e-6■■■■□ 23.5
XRN2Q9H0D6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.81■■■□□ 2.27e-6■■■■□ 23.5
XRN2Q9H0D6 NAP1L1-222ENST00000551992 1074 ntTSL 528.43■■■□□ 2.144e-9■■■■□ 23.5
XRN2Q9H0D6 FNTA-202ENST00000524546 750 ntTSL 327.48■■□□□ 1.997e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-212ENST00000533383 982 ntTSL 527.48■■□□□ 1.997e-6■■■■□ 23.5
XRN2Q9H0D6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.4■■□□□ 1.825e-6■■■■□ 23.5
XRN2Q9H0D6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.9■■□□□ 1.747e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.684e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.46■■□□□ 1.674e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-203ENST00000426198 885 ntTSL 225.18■■□□□ 1.622e-9■■■■□ 23.5
XRN2Q9H0D6 URGCP-211ENST00000477768 500 ntTSL 425.18■■□□□ 1.622e-9■■■■□ 23.5
XRN2Q9H0D6 SPIN1-202ENST00000462844 599 ntTSL 225.16■■□□□ 1.624e-6■■■■□ 23.5
XRN2Q9H0D6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.597e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.597e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-206ENST00000527153 582 ntTSL 324.78■■□□□ 1.567e-6■■■■□ 23.5
XRN2Q9H0D6 ATP1A1-204ENST00000418797 654 ntTSL 324.22■■□□□ 1.477e-7■■■■□ 23.5
XRN2Q9H0D6 USF2-210ENST00000598058 510 ntTSL 223.88■■□□□ 1.414e-6■■■■□ 23.5
XRN2Q9H0D6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.417e-6■■■■□ 23.5
XRN2Q9H0D6 ULK1-204ENST00000540647 1211 ntTSL 223.73■■□□□ 1.396e-8■■■■□ 23.5
XRN2Q9H0D6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.71■■□□□ 1.397e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.46■■□□□ 1.354e-6■■■■□ 23.5
XRN2Q9H0D6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.23■■□□□ 1.317e-6■■■■□ 23.5
XRN2Q9H0D6 SPIN1-206ENST00000485804 814 ntTSL 323.23■■□□□ 1.314e-6■■■■□ 23.5
XRN2Q9H0D6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.35e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-210ENST00000455762 1022 ntTSL 522.81■■□□□ 1.243e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.71■■□□□ 1.234e-6■■■■□ 23.5
XRN2Q9H0D6 SPIN1-203ENST00000469017 2082 ntTSL 222.55■■□□□ 1.24e-6■■■■□ 23.5
XRN2Q9H0D6 AHNAK-207ENST00000531324 579 ntAPPRIS ALT2 TSL 321.8■■□□□ 1.087e-6■■■■□ 23.5
XRN2Q9H0D6 ATP1A1-208ENST00000488733 1728 ntTSL 221.58■■□□□ 1.047e-7■■■■□ 23.5
XRN2Q9H0D6 SPIN1-205ENST00000485565 706 ntTSL 321.55■■□□□ 1.044e-6■■■■□ 23.5
XRN2Q9H0D6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.54■■□□□ 1.044e-6■■■■□ 23.5
XRN2Q9H0D6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.015e-6■■■■□ 23.5
XRN2Q9H0D6 CLOCK-203ENST00000435527 746 ntTSL 321.32■■□□□ 13e-7■■■■□ 23.5
XRN2Q9H0D6 CLOCK-210ENST00000513033 567 ntTSL 421.32■■□□□ 13e-7■■■■□ 23.5
XRN2Q9H0D6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.967e-6■■■■□ 23.5
XRN2Q9H0D6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.71■□□□□ 0.917e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.67■□□□□ 0.92e-9■■■■□ 23.5
XRN2Q9H0D6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.85e-6■■■■□ 23.5
XRN2Q9H0D6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.797e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-205ENST00000416258 2188 ntTSL 519.74■□□□□ 0.755e-6■■■■□ 23.5
XRN2Q9H0D6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.52■□□□□ 0.715e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-201ENST00000333877 2228 ntTSL 219.35■□□□□ 0.693e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-207ENST00000431323 888 ntTSL 518.59■□□□□ 0.573e-6■■■■□ 23.5
XRN2Q9H0D6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.461e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-206ENST00000421397 574 ntTSL 517.86■□□□□ 0.453e-6■■■■□ 23.5
XRN2Q9H0D6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.397e-6■■■■□ 23.5
XRN2Q9H0D6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.34■□□□□ 0.375e-6■■■■□ 23.5
XRN2Q9H0D6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.367e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-212ENST00000463820 2495 ntTSL 216.99■□□□□ 0.315e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.283e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-213ENST00000497914 4360 ntTSL 1 (best)16.8■□□□□ 0.282e-9■■■■□ 23.5
XRN2Q9H0D6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.243e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)16.3■□□□□ 0.27e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-208ENST00000443203 553 ntTSL 416.24■□□□□ 0.192e-7■■■■□ 23.5
XRN2Q9H0D6 TARS-203ENST00000502508 552 ntTSL 516.17■□□□□ 0.187e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-205ENST00000526755 4676 ntTSL 1 (best)15.87■□□□□ 0.137e-6■■■■□ 23.5
XRN2Q9H0D6 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 315.78■□□□□ 0.127e-6■■■■□ 23.5
XRN2Q9H0D6 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.117e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-208ENST00000455877 591 ntTSL 415.6■□□□□ 0.092e-9■■■■□ 23.5
XRN2Q9H0D6 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.032e-9■■■■□ 23.5
XRN2Q9H0D6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.037e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.027e-6■■■■□ 23.5
XRN2Q9H0D6 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.11■□□□□ 0.017e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-204ENST00000411649 561 ntTSL 414.56□□□□□ -0.082e-7■■■■□ 23.5
XRN2Q9H0D6 MSH5-206ENST00000423982 2706 ntTSL 514.56□□□□□ -0.087e-6■■■■□ 23.5
XRN2Q9H0D6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.097e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.12e-9■■■■□ 23.5
XRN2Q9H0D6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.117e-6■■■■□ 23.5
XRN2Q9H0D6 MELTF-AS1-205ENST00000446695 204 ntTSL 314.36□□□□□ -0.117e-6■■■■□ 23.5
XRN2Q9H0D6 PKM-209ENST00000563986 825 ntTSL 214.29□□□□□ -0.127e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.1□□□□□ -0.157e-6■■■■□ 23.5
XRN2Q9H0D6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.05□□□□□ -0.163e-6■■■■□ 23.5
XRN2Q9H0D6 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.217e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-209ENST00000531266 590 ntTSL 513.1□□□□□ -0.317e-6■■■■□ 23.5
XRN2Q9H0D6 ATP2A3-213ENST00000574202 230 ntTSL 212.9□□□□□ -0.347e-6■■■■□ 23.5
XRN2Q9H0D6 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.354e-6■■■■□ 23.5
Retrieved 100 of 21,068 protein–RNA pairs in 146.6 ms