RNA–Protein interactions for RNA: ENST00000585895.1

ARID3A-204, Transcript of AT-rich interaction domain 3A, humanhuman

TSL 2

Gene ARID3A, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-204ENST00000585895 NISCHQ9Y2I1 1504 aa62.1■■■■■ 7.53
ARID3A-204ENST00000585895 CCDC180Q9P1Z9 1646 aa54.85■■■■■ 6.37
ARID3A-204ENST00000585895 ABCC9O60706 1549 aa53.22■■■■■ 6.11
ARID3A-204ENST00000585895 ZCCHC6Q5VYS8 1495 aaKnown RBP51.84■■■■■ 5.89
ARID3A-204ENST00000585895 DCAF8L2P0C7V8 631 aa51.77■■■■■ 5.88
ARID3A-204ENST00000585895 NACADO15069 1562 aa51.53■■■■■ 5.84
ARID3A-204ENST00000585895 RB1CC1Q8TDY2 1594 aa51.43■■■■■ 5.82
ARID3A-204ENST00000585895 MYO15BQ96JP2 1530 aa51.43■■■■■ 5.82
ARID3A-204ENST00000585895 DCAF1Q9Y4B6 1507 aa51.42■■■■■ 5.82
ARID3A-204ENST00000585895 SCRIBQ14160 1630 aa50.14■■■■■ 5.62
ARID3A-204ENST00000585895 UNC13AQ9UPW8 1703 aa50.08■■■■■ 5.61
ARID3A-204ENST00000585895 PABPN1Q86U42 306 aaKnown RBP eCLIP49.9■■■■■ 5.58
ARID3A-204ENST00000585895 BICRAQ9NZM4 1560 aa49.8■■■■■ 5.56
ARID3A-204ENST00000585895 SHROOM4Q9ULL8 1493 aa49.44■■■■■ 5.51
ARID3A-204ENST00000585895 EIF4G1Q04637 1599 aaKnown RBP48.47■■■■■ 5.35
ARID3A-204ENST00000585895 DNAJC5BQ9UF47 199 aa48.35■■■■■ 5.33
ARID3A-204ENST00000585895 CECR2Q9BXF3 1484 aa48.31■■■■■ 5.32
ARID3A-204ENST00000585895 CC2D2AQ9P2K1 1620 aa48.11■■■■■ 5.29
ARID3A-204ENST00000585895 BAZ1AQ9NRL2 1556 aaPredicted RBP48.09■■■■■ 5.29
ARID3A-204ENST00000585895 SMARCA4P51532 1647 aa48.01■■■■■ 5.28
ARID3A-204ENST00000585895 MROH2BQ7Z745 1585 aa47.86■■■■■ 5.25
ARID3A-204ENST00000585895 ATAD2BQ9ULI0 1458 aa47.67■■■■■ 5.22
ARID3A-204ENST00000585895 SMARCA2P51531 1590 aa47.63■■■■■ 5.22
ARID3A-204ENST00000585895 NCAPD3P42695 1498 aa47.59■■■■■ 5.21
ARID3A-204ENST00000585895 RSF1Q96T23 1441 aaPredicted RBP47.57■■■■■ 5.21
ARID3A-204ENST00000585895 PEG3Q9GZU2 1588 aa47.55■■■■■ 5.2
ARID3A-204ENST00000585895 HMGXB3Q12766 1538 aa47.34■■■■■ 5.17
ARID3A-204ENST00000585895 BAZ1BQ9UIG0 1483 aaKnown RBP47.32■■■■■ 5.17
ARID3A-204ENST00000585895 WIZO95785 1651 aa47.31■■■■■ 5.16
ARID3A-204ENST00000585895 TOP2AP11388 1531 aaKnown RBP46.9■■■■■ 5.1
ARID3A-204ENST00000585895 SUPT5HO00267 1087 aaKnown RBP46.87■■■■■ 5.09
ARID3A-204ENST00000585895 CCDC88BA6NC98 1476 aa46.38■■■■■ 5.02
ARID3A-204ENST00000585895 CADPSQ9ULU8 1353 aa46.25■■■■■ 4.99
ARID3A-204ENST00000585895 NESP48681 1621 aa46.2■■■■■ 4.99
ARID3A-204ENST00000585895 LAMC3Q9Y6N6 1575 aa46.18■■■■■ 4.98
ARID3A-204ENST00000585895 CFTRP13569 1480 aa46.06■■■■■ 4.96
ARID3A-204ENST00000585895 PDS5BQ9NTI5 1447 aa45.94■■■■■ 4.94
ARID3A-204ENST00000585895 ERCC6Q03468 1493 aa45.86■■■■■ 4.93
ARID3A-204ENST00000585895 FANCD2Q9BXW9 1451 aa45.68■■■■■ 4.9
ARID3A-204ENST00000585895 KIF21AQ7Z4S6 1674 aa45.57■■■■■ 4.88
ARID3A-204ENST00000585895 CEP164Q9UPV0 1460 aa45.56■■■■■ 4.88
ARID3A-204ENST00000585895 PRDM2Q13029 1718 aa45.55■■■■■ 4.88
ARID3A-204ENST00000585895 MRC2Q9UBG0 1479 aa45.37■■■■■ 4.85
ARID3A-204ENST00000585895 THOC2Q8NI27 1593 aaKnown RBP45.31■■■■■ 4.84
ARID3A-204ENST00000585895 WDR62O43379 1518 aa45.16■■■■■ 4.82
ARID3A-204ENST00000585895 URB2Q14146 1524 aaKnown RBP45.16■■■■■ 4.82
ARID3A-204ENST00000585895 CUX2O14529 1486 aa45.15■■■■■ 4.82
ARID3A-204ENST00000585895 ABCC8Q09428 1581 aa45.08■■■■■ 4.81
ARID3A-204ENST00000585895 TOPBP1Q92547 1522 aa45■■■■■ 4.79
ARID3A-204ENST00000585895 DNMBPQ6XZF7 1577 aa44.97■■■■■ 4.79
ARID3A-204ENST00000585895 CUX1P39880 1505 aa44.85■■■■■ 4.77
ARID3A-204ENST00000585895 WRNQ14191 1432 aaPredicted RBP eCLIP44.84■■■■■ 4.77
ARID3A-204ENST00000585895 POLA1P09884 1462 aaPredicted RBP44.66■■■■■ 4.74
ARID3A-204ENST00000585895 FGD5Q6ZNL6 1462 aa44.63■■■■■ 4.73
ARID3A-204ENST00000585895 TOP2BQ02880 1626 aa44.61■■■■■ 4.73
ARID3A-204ENST00000585895 SYNJ1O43426 1573 aa44.6■■■■■ 4.73
ARID3A-204ENST00000585895 IFT140Q96RY7 1462 aa44.6■■■■■ 4.73
ARID3A-204ENST00000585895 BIVM-ERCC5R4GMW8 1640 aa44.56■■■■■ 4.72
ARID3A-204ENST00000585895 SOGA1O94964 1423 aa44.54■■■■■ 4.72
ARID3A-204ENST00000585895 RAD54L2Q9Y4B4 1467 aa44.47■■■■■ 4.71
ARID3A-204ENST00000585895 TARBP1Q13395 1621 aaKnown RBP44.4■■■■■ 4.7
ARID3A-204ENST00000585895 ZNF608Q9ULD9 1512 aaPredicted RBP44.31■■■■■ 4.68
ARID3A-204ENST00000585895 TRIM41Q8WV44 630 aa44.27■■■■■ 4.68
ARID3A-204ENST00000585895 ABCA10Q8WWZ4 1543 aa44.24■■■■■ 4.67
ARID3A-204ENST00000585895 TDRD9Q8NDG6 1382 aaKnown RBP44.21■■■■■ 4.67
ARID3A-204ENST00000585895 AQRO60306 1485 aaKnown RBP eCLIP44.17■■■■■ 4.662e-8■□□□□ 9.6
ARID3A-204ENST00000585895 WDR97A6NE52 1622 aa44.12■■■■■ 4.65
ARID3A-204ENST00000585895 EIF4G3O43432 1585 aaKnown RBP44.1■■■■■ 4.65
ARID3A-204ENST00000585895 CHIC1Q5VXU3 224 aa44.08■■■■■ 4.65
ARID3A-204ENST00000585895 GAPVD1Q14C86 1478 aa44.01■■■■■ 4.64
ARID3A-204ENST00000585895 ABCA5Q8WWZ7 1642 aa43.93■■■■■ 4.62
ARID3A-204ENST00000585895 GRIN2BQ13224 1484 aa43.93■■■■■ 4.62
ARID3A-204ENST00000585895 KIF27Q86VH2 1401 aa43.89■■■■■ 4.62
ARID3A-204ENST00000585895 SNAPC4Q5SXM2 1469 aa43.76■■■■■ 4.6
ARID3A-204ENST00000585895 MAGI1Q96QZ7 1491 aaPredicted RBP43.74■■■■■ 4.59
ARID3A-204ENST00000585895 PBRM1Q86U86 1689 aa43.72■■■■■ 4.59
ARID3A-204ENST00000585895 ERICH3Q5RHP9 1530 aa43.72■■■■■ 4.59
ARID3A-204ENST00000585895 IGF1RP08069 1367 aa43.65■■■■■ 4.58
ARID3A-204ENST00000585895 RUSC2Q8N2Y8 1516 aa43.6■■■■■ 4.57
ARID3A-204ENST00000585895 FBLN2P98095 1184 aa43.6■■■■■ 4.57
ARID3A-204ENST00000585895 CHMP7Q8WUX9 453 aaPredicted RBP43.59■■■■■ 4.57
ARID3A-204ENST00000585895 SYNJ2O15056 1496 aa43.57■■■■■ 4.56
ARID3A-204ENST00000585895 FHAD1B1AJZ9 1412 aa43.55■■■■■ 4.56
ARID3A-204ENST00000585895 ADAMTS12P58397 1594 aa43.49■■■■■ 4.55
ARID3A-204ENST00000585895 OSCARQ8IYS5 282 aa43.48■■■■■ 4.55
ARID3A-204ENST00000585895 EEA1Q15075 1411 aa43.45■■■■■ 4.55
ARID3A-204ENST00000585895 CARMIL1Q5VZK9 1371 aa43.41■■■■■ 4.54
ARID3A-204ENST00000585895 CUL7Q14999 1698 aa43.38■■■■■ 4.54
ARID3A-204ENST00000585895 CHD1O14646 1710 aa43.37■■■■■ 4.53
ARID3A-204ENST00000585895 GRIN2AQ12879 1464 aa43.34■■■■■ 4.53
ARID3A-204ENST00000585895 CSRNP3Q8WYN3 585 aa43.34■■■■■ 4.53
ARID3A-204ENST00000585895 FAM9AQ8IZU1 332 aaPredicted RBP43.3■■■■■ 4.52
ARID3A-204ENST00000585895 RAPGEF2Q9Y4G8 1499 aa43.18■■■■■ 4.5
ARID3A-204ENST00000585895 PRXQ9BXM0 1461 aa43.16■■■■■ 4.5
ARID3A-204ENST00000585895 DNAJC5Q9H3Z4 198 aa43.14■■■■■ 4.5
ARID3A-204ENST00000585895 NUP160Q12769 1436 aa43.14■■■■■ 4.5
ARID3A-204ENST00000585895 CEP170Q5SW79 1584 aa43.04■■■■■ 4.48
ARID3A-204ENST00000585895 CLASP1Q7Z460 1538 aa43.01■■■■■ 4.48
ARID3A-204ENST00000585895 KIAA0586Q9BVV6 1533 aa42.89■■■■■ 4.46
ARID3A-204ENST00000585895 KIF21BO75037 1637 aa42.85■■■■■ 4.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms