RNA–Protein interactions for RNA: ENST00000382882.7

NELFA-202, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 3,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-202ENST00000382882 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
NELFA-202ENST00000382882 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
NELFA-202ENST00000382882 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
NELFA-202ENST00000382882 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
NELFA-202ENST00000382882 HRCP23327 699 aa24.76■■□□□ 1.55
NELFA-202ENST00000382882 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
NELFA-202ENST00000382882 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
NELFA-202ENST00000382882 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
NELFA-202ENST00000382882 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
NELFA-202ENST00000382882 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
NELFA-202ENST00000382882 TRIM26Q12899 539 aaPredicted RBP23.7■■□□□ 1.38
NELFA-202ENST00000382882 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
NELFA-202ENST00000382882 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
NELFA-202ENST00000382882 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
NELFA-202ENST00000382882 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
NELFA-202ENST00000382882 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
NELFA-202ENST00000382882 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
NELFA-202ENST00000382882 SCAF1Q9H7N4 1312 aaKnown RBP23.36■■□□□ 1.33
NELFA-202ENST00000382882 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
NELFA-202ENST00000382882 ABCC9O60706 1549 aa23.14■■□□□ 1.29
NELFA-202ENST00000382882 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
NELFA-202ENST00000382882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
NELFA-202ENST00000382882 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
NELFA-202ENST00000382882 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
NELFA-202ENST00000382882 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
NELFA-202ENST00000382882 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
NELFA-202ENST00000382882 GTF3C3Q9Y5Q9 886 aa22.83■■□□□ 1.24
NELFA-202ENST00000382882 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
NELFA-202ENST00000382882 DIEXFQ68CQ4 756 aaKnown RBP22.72■■□□□ 1.23
NELFA-202ENST00000382882 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
NELFA-202ENST00000382882 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.22
NELFA-202ENST00000382882 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
NELFA-202ENST00000382882 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
NELFA-202ENST00000382882 MYT1Q01538 1121 aa22.47■■□□□ 1.19
NELFA-202ENST00000382882 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
NELFA-202ENST00000382882 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
NELFA-202ENST00000382882 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
NELFA-202ENST00000382882 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
NELFA-202ENST00000382882 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
NELFA-202ENST00000382882 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
NELFA-202ENST00000382882 MIER1Q8N108 512 aa22.14■■□□□ 1.13
NELFA-202ENST00000382882 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
NELFA-202ENST00000382882 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
NELFA-202ENST00000382882 APLP2Q06481 763 aa21.83■■□□□ 1.08
NELFA-202ENST00000382882 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
NELFA-202ENST00000382882 WIZO95785 1651 aa21.79■■□□□ 1.08
NELFA-202ENST00000382882 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
NELFA-202ENST00000382882 SOGA1O94964 1423 aa21.77■■□□□ 1.07
NELFA-202ENST00000382882 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
NELFA-202ENST00000382882 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
NELFA-202ENST00000382882 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
NELFA-202ENST00000382882 NACADO15069 1562 aa21.66■■□□□ 1.06
NELFA-202ENST00000382882 SUPT16HQ9Y5B9 1047 aaKnown RBP21.64■■□□□ 1.05
NELFA-202ENST00000382882 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
NELFA-202ENST00000382882 BCANQ96GW7 911 aa21.6■■□□□ 1.05
NELFA-202ENST00000382882 ITGAEP38570 1179 aa21.47■■□□□ 1.03
NELFA-202ENST00000382882 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
NELFA-202ENST00000382882 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
NELFA-202ENST00000382882 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
NELFA-202ENST00000382882 CLIP1P30622 1438 aa21.43■■□□□ 1.02
NELFA-202ENST00000382882 ANP32EQ9BTT0 268 aa21.41■■□□□ 1.02
NELFA-202ENST00000382882 EEA1Q15075 1411 aa21.37■■□□□ 1.01
NELFA-202ENST00000382882 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
NELFA-202ENST00000382882 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
NELFA-202ENST00000382882 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
NELFA-202ENST00000382882 FKBP8Q14318 412 aa21.32■■□□□ 1
NELFA-202ENST00000382882 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
NELFA-202ENST00000382882 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
NELFA-202ENST00000382882 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
NELFA-202ENST00000382882 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
NELFA-202ENST00000382882 NEFLP07196 543 aa21.23■□□□□ 0.99
NELFA-202ENST00000382882 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
NELFA-202ENST00000382882 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
NELFA-202ENST00000382882 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
NELFA-202ENST00000382882 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
NELFA-202ENST00000382882 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
NELFA-202ENST00000382882 TRIM52Q96A61 297 aa21.14■□□□□ 0.98
NELFA-202ENST00000382882 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
NELFA-202ENST00000382882 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
NELFA-202ENST00000382882 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
NELFA-202ENST00000382882 P3H3Q8IVL6 736 aa21.08■□□□□ 0.96
NELFA-202ENST00000382882 RBM19Q9Y4C8 960 aaKnown RBP21.05■□□□□ 0.96
NELFA-202ENST00000382882 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
NELFA-202ENST00000382882 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
NELFA-202ENST00000382882 SIN3AQ96ST3 1273 aa20.99■□□□□ 0.95
NELFA-202ENST00000382882 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
NELFA-202ENST00000382882 KIF21BO75037 1637 aa20.97■□□□□ 0.95
NELFA-202ENST00000382882 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.94
NELFA-202ENST00000382882 IRX6P78412 446 aaPredicted RBP20.93■□□□□ 0.94
NELFA-202ENST00000382882 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
NELFA-202ENST00000382882 ANP32CO43423 234 aa20.93■□□□□ 0.94
NELFA-202ENST00000382882 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
NELFA-202ENST00000382882 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
NELFA-202ENST00000382882 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
NELFA-202ENST00000382882 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
NELFA-202ENST00000382882 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
NELFA-202ENST00000382882 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
NELFA-202ENST00000382882 HNRNPUQ00839 825 aaKnown RBP eCLIP20.77■□□□□ 0.92
NELFA-202ENST00000382882 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
NELFA-202ENST00000382882 MSH5O43196 834 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms