RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 NISCHQ9Y2I1 1504 aa44.6■■■■■ 4.73
SPIN1-205ENST00000485565 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
SPIN1-205ENST00000485565 ABCC9O60706 1549 aa39.71■■■■□ 3.95
SPIN1-205ENST00000485565 RB1CC1Q8TDY2 1594 aa37.82■■■■□ 3.65
SPIN1-205ENST00000485565 NACADO15069 1562 aa37.62■■■■□ 3.61
SPIN1-205ENST00000485565 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
SPIN1-205ENST00000485565 DNAJC5BQ9UF47 199 aa37.26■■■■□ 3.56
SPIN1-205ENST00000485565 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
SPIN1-205ENST00000485565 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
SPIN1-205ENST00000485565 ZCCHC6Q5VYS8 1495 aaKnown RBP37.05■■■■□ 3.52
SPIN1-205ENST00000485565 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.52
SPIN1-205ENST00000485565 DCAF1Q9Y4B6 1507 aa36.84■■■■□ 3.49
SPIN1-205ENST00000485565 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
SPIN1-205ENST00000485565 SCRIBQ14160 1630 aa36.44■■■■□ 3.42
SPIN1-205ENST00000485565 SHROOM4Q9ULL8 1493 aa36.19■■■■□ 3.38
SPIN1-205ENST00000485565 CC2D2AQ9P2K1 1620 aa35.85■■■■□ 3.33
SPIN1-205ENST00000485565 EIF4G1Q04637 1599 aaKnown RBP35.8■■■■□ 3.32
SPIN1-205ENST00000485565 CECR2Q9BXF3 1484 aa35.77■■■■□ 3.32
SPIN1-205ENST00000485565 SMARCA4P51532 1647 aa34.77■■■■□ 3.16
SPIN1-205ENST00000485565 NCAPD3P42695 1498 aa34.69■■■■□ 3.14
SPIN1-205ENST00000485565 ATAD2BQ9ULI0 1458 aa34.66■■■■□ 3.14
SPIN1-205ENST00000485565 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
SPIN1-205ENST00000485565 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
SPIN1-205ENST00000485565 HMGXB3Q12766 1538 aa34.51■■■■□ 3.12
SPIN1-205ENST00000485565 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
SPIN1-205ENST00000485565 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
SPIN1-205ENST00000485565 BAZ1BQ9UIG0 1483 aaKnown RBP34.36■■■■□ 3.09
SPIN1-205ENST00000485565 ERCC6Q03468 1493 aa34.28■■■■□ 3.08
SPIN1-205ENST00000485565 CUX2O14529 1486 aa34.2■■■■□ 3.07
SPIN1-205ENST00000485565 DNAJC5Q9H3Z4 198 aa34.19■■■■□ 3.06
SPIN1-205ENST00000485565 NESP48681 1621 aa34.12■■■■□ 3.05
SPIN1-205ENST00000485565 WIZO95785 1651 aa34.06■■■■□ 3.04
SPIN1-205ENST00000485565 LAMC3Q9Y6N6 1575 aa33.92■■■■□ 3.02
SPIN1-205ENST00000485565 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
SPIN1-205ENST00000485565 RSF1Q96T23 1441 aaPredicted RBP33.76■■■□□ 2.99
SPIN1-205ENST00000485565 THOC2Q8NI27 1593 aaKnown RBP33.74■■■□□ 2.99
SPIN1-205ENST00000485565 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.98
SPIN1-205ENST00000485565 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
SPIN1-205ENST00000485565 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
SPIN1-205ENST00000485565 MRC2Q9UBG0 1479 aa33.4■■■□□ 2.94
SPIN1-205ENST00000485565 CFTRP13569 1480 aa33.35■■■□□ 2.93
SPIN1-205ENST00000485565 CEP164Q9UPV0 1460 aa33.32■■■□□ 2.92
SPIN1-205ENST00000485565 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
SPIN1-205ENST00000485565 WDR62O43379 1518 aa33.3■■■□□ 2.92
SPIN1-205ENST00000485565 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
SPIN1-205ENST00000485565 CCDC88BA6NC98 1476 aa33.18■■■□□ 2.9
SPIN1-205ENST00000485565 URB2Q14146 1524 aaKnown RBP33.04■■■□□ 2.88
SPIN1-205ENST00000485565 TOPBP1Q92547 1522 aa32.73■■■□□ 2.83
SPIN1-205ENST00000485565 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
SPIN1-205ENST00000485565 OSCARQ8IYS5 282 aa32.68■■■□□ 2.82
SPIN1-205ENST00000485565 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
SPIN1-205ENST00000485565 ABCC8Q09428 1581 aa32.63■■■□□ 2.81
SPIN1-205ENST00000485565 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
SPIN1-205ENST00000485565 ZNF608Q9ULD9 1512 aaPredicted RBP32.57■■■□□ 2.8
SPIN1-205ENST00000485565 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
SPIN1-205ENST00000485565 EIF4G3O43432 1585 aaKnown RBP32.46■■■□□ 2.79
SPIN1-205ENST00000485565 TARBP1Q13395 1621 aaKnown RBP32.45■■■□□ 2.79
SPIN1-205ENST00000485565 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
SPIN1-205ENST00000485565 CUX1P39880 1505 aa32.3■■■□□ 2.76
SPIN1-205ENST00000485565 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.76
SPIN1-205ENST00000485565 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
SPIN1-205ENST00000485565 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
SPIN1-205ENST00000485565 SOGA1O94964 1423 aa32.24■■■□□ 2.75
SPIN1-205ENST00000485565 CHD1O14646 1710 aa32.21■■■□□ 2.75
SPIN1-205ENST00000485565 RIMBP3CA6NJZ7 1639 aa32.2■■■□□ 2.75
SPIN1-205ENST00000485565 RIMBP3BA6NNM3 1639 aa32.2■■■□□ 2.75
SPIN1-205ENST00000485565 RIMBP3Q9UFD9 1639 aa32.2■■■□□ 2.75
SPIN1-205ENST00000485565 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
SPIN1-205ENST00000485565 ARHGEF11O15085 1522 aa32.13■■■□□ 2.73
SPIN1-205ENST00000485565 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
SPIN1-205ENST00000485565 FBLN2P98095 1184 aa32.08■■■□□ 2.73
SPIN1-205ENST00000485565 SNAPC4Q5SXM2 1469 aa32■■■□□ 2.71
SPIN1-205ENST00000485565 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
SPIN1-205ENST00000485565 GRIN2BQ13224 1484 aa31.92■■■□□ 2.7
SPIN1-205ENST00000485565 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
SPIN1-205ENST00000485565 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
SPIN1-205ENST00000485565 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
SPIN1-205ENST00000485565 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
SPIN1-205ENST00000485565 SYNJ1O43426 1573 aa31.88■■■□□ 2.69
SPIN1-205ENST00000485565 TOP2BQ02880 1626 aa31.88■■■□□ 2.69
SPIN1-205ENST00000485565 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
SPIN1-205ENST00000485565 GAPVD1Q14C86 1478 aa31.87■■■□□ 2.69
SPIN1-205ENST00000485565 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
SPIN1-205ENST00000485565 CHMP7Q8WUX9 453 aaPredicted RBP31.84■■■□□ 2.69
SPIN1-205ENST00000485565 ARAP1Q96P48 1450 aa31.82■■■□□ 2.68
SPIN1-205ENST00000485565 SYNJ2O15056 1496 aa31.79■■■□□ 2.68
SPIN1-205ENST00000485565 CLASP1Q7Z460 1538 aa31.76■■■□□ 2.68
SPIN1-205ENST00000485565 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
SPIN1-205ENST00000485565 TRHP20396 242 aaPredicted RBP31.55■■■□□ 2.64
SPIN1-205ENST00000485565 GRIN2AQ12879 1464 aa31.54■■■□□ 2.64
SPIN1-205ENST00000485565 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
SPIN1-205ENST00000485565 FHAD1B1AJZ9 1412 aa31.46■■■□□ 2.63
SPIN1-205ENST00000485565 CEP170Q5SW79 1584 aa31.46■■■□□ 2.63
SPIN1-205ENST00000485565 NUP160Q12769 1436 aa31.4■■■□□ 2.62
SPIN1-205ENST00000485565 ERCC6L2Q5T890 1561 aa31.33■■■□□ 2.61
SPIN1-205ENST00000485565 SHROOM2Q13796 1616 aa31.29■■■□□ 2.6
SPIN1-205ENST00000485565 KIF27Q86VH2 1401 aa31.2■■■□□ 2.59
SPIN1-205ENST00000485565 RUSC2Q8N2Y8 1516 aa31.17■■■□□ 2.58
SPIN1-205ENST00000485565 CUL7Q14999 1698 aa31.16■■■□□ 2.58
SPIN1-205ENST00000485565 IGF1RP08069 1367 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms