RNA–Protein interactions for RNA: ENST00000588806.1

ATP6V0A1-219, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 842 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-219ENST00000588806 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
ATP6V0A1-219ENST00000588806 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
ATP6V0A1-219ENST00000588806 ABCC9O60706 1549 aa24.3■■□□□ 1.48
ATP6V0A1-219ENST00000588806 NACADO15069 1562 aa23.57■■□□□ 1.36
ATP6V0A1-219ENST00000588806 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
ATP6V0A1-219ENST00000588806 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
ATP6V0A1-219ENST00000588806 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
ATP6V0A1-219ENST00000588806 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
ATP6V0A1-219ENST00000588806 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
ATP6V0A1-219ENST00000588806 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
ATP6V0A1-219ENST00000588806 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
ATP6V0A1-219ENST00000588806 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
ATP6V0A1-219ENST00000588806 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
ATP6V0A1-219ENST00000588806 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
ATP6V0A1-219ENST00000588806 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
ATP6V0A1-219ENST00000588806 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
ATP6V0A1-219ENST00000588806 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
ATP6V0A1-219ENST00000588806 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
ATP6V0A1-219ENST00000588806 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
ATP6V0A1-219ENST00000588806 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
ATP6V0A1-219ENST00000588806 NCAPD3P42695 1498 aa21.77■■□□□ 1.07
ATP6V0A1-219ENST00000588806 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
ATP6V0A1-219ENST00000588806 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
ATP6V0A1-219ENST00000588806 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
ATP6V0A1-219ENST00000588806 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
ATP6V0A1-219ENST00000588806 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
ATP6V0A1-219ENST00000588806 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
ATP6V0A1-219ENST00000588806 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.04
ATP6V0A1-219ENST00000588806 WIZO95785 1651 aa21.42■■□□□ 1.02
ATP6V0A1-219ENST00000588806 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
ATP6V0A1-219ENST00000588806 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
ATP6V0A1-219ENST00000588806 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
ATP6V0A1-219ENST00000588806 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
ATP6V0A1-219ENST00000588806 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
ATP6V0A1-219ENST00000588806 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
ATP6V0A1-219ENST00000588806 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
ATP6V0A1-219ENST00000588806 NESP48681 1621 aa21.03■□□□□ 0.96
ATP6V0A1-219ENST00000588806 CFTRP13569 1480 aa21.02■□□□□ 0.96
ATP6V0A1-219ENST00000588806 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
ATP6V0A1-219ENST00000588806 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
ATP6V0A1-219ENST00000588806 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
ATP6V0A1-219ENST00000588806 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
ATP6V0A1-219ENST00000588806 CUX2O14529 1486 aa20.78■□□□□ 0.92
ATP6V0A1-219ENST00000588806 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
ATP6V0A1-219ENST00000588806 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
ATP6V0A1-219ENST00000588806 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
ATP6V0A1-219ENST00000588806 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
ATP6V0A1-219ENST00000588806 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
ATP6V0A1-219ENST00000588806 WDR62O43379 1518 aa20.64■□□□□ 0.9
ATP6V0A1-219ENST00000588806 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
ATP6V0A1-219ENST00000588806 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
ATP6V0A1-219ENST00000588806 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
ATP6V0A1-219ENST00000588806 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
ATP6V0A1-219ENST00000588806 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
ATP6V0A1-219ENST00000588806 CUX1P39880 1505 aa20.36■□□□□ 0.85
ATP6V0A1-219ENST00000588806 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
ATP6V0A1-219ENST00000588806 SOGA1O94964 1423 aa20.32■□□□□ 0.84
ATP6V0A1-219ENST00000588806 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
ATP6V0A1-219ENST00000588806 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
ATP6V0A1-219ENST00000588806 TARBP1Q13395 1621 aaKnown RBP20.21■□□□□ 0.83
ATP6V0A1-219ENST00000588806 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
ATP6V0A1-219ENST00000588806 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
ATP6V0A1-219ENST00000588806 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
ATP6V0A1-219ENST00000588806 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
ATP6V0A1-219ENST00000588806 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-219ENST00000588806 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
ATP6V0A1-219ENST00000588806 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
ATP6V0A1-219ENST00000588806 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.813e-7■■■■■ 47.5
ATP6V0A1-219ENST00000588806 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
ATP6V0A1-219ENST00000588806 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
ATP6V0A1-219ENST00000588806 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
ATP6V0A1-219ENST00000588806 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
ATP6V0A1-219ENST00000588806 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
ATP6V0A1-219ENST00000588806 OSCARQ8IYS5 282 aa20■□□□□ 0.79
ATP6V0A1-219ENST00000588806 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
ATP6V0A1-219ENST00000588806 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
ATP6V0A1-219ENST00000588806 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
ATP6V0A1-219ENST00000588806 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
ATP6V0A1-219ENST00000588806 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
ATP6V0A1-219ENST00000588806 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
ATP6V0A1-219ENST00000588806 FBLN2P98095 1184 aa19.91■□□□□ 0.78
ATP6V0A1-219ENST00000588806 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
ATP6V0A1-219ENST00000588806 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
ATP6V0A1-219ENST00000588806 IGF1RP08069 1367 aa19.86■□□□□ 0.77
ATP6V0A1-219ENST00000588806 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
ATP6V0A1-219ENST00000588806 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
ATP6V0A1-219ENST00000588806 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
ATP6V0A1-219ENST00000588806 EEA1Q15075 1411 aa19.76■□□□□ 0.75
ATP6V0A1-219ENST00000588806 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
ATP6V0A1-219ENST00000588806 CUL7Q14999 1698 aa19.74■□□□□ 0.75
ATP6V0A1-219ENST00000588806 CHD1O14646 1710 aa19.73■□□□□ 0.75
ATP6V0A1-219ENST00000588806 NUP160Q12769 1436 aa19.69■□□□□ 0.74
ATP6V0A1-219ENST00000588806 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
ATP6V0A1-219ENST00000588806 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
ATP6V0A1-219ENST00000588806 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
ATP6V0A1-219ENST00000588806 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
ATP6V0A1-219ENST00000588806 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
ATP6V0A1-219ENST00000588806 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
ATP6V0A1-219ENST00000588806 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.73
ATP6V0A1-219ENST00000588806 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms