RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 NISCHQ9Y2I1 1504 aa45.57■■■■■ 4.89
ATP1A1-208ENST00000488733 CCDC180Q9P1Z9 1646 aa39.91■■■■□ 3.98
ATP1A1-208ENST00000488733 ZCCHC6Q5VYS8 1495 aaKnown RBP38.23■■■■□ 3.71
ATP1A1-208ENST00000488733 ABCC9O60706 1549 aa38.04■■■■□ 3.68
ATP1A1-208ENST00000488733 DCAF8L2P0C7V8 631 aa37.7■■■■□ 3.63
ATP1A1-208ENST00000488733 DCAF1Q9Y4B6 1507 aa37.7■■■■□ 3.63
ATP1A1-208ENST00000488733 MYO15BQ96JP2 1530 aa37.39■■■■□ 3.58
ATP1A1-208ENST00000488733 NACADO15069 1562 aa37.26■■■■□ 3.56
ATP1A1-208ENST00000488733 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
ATP1A1-208ENST00000488733 SHROOM4Q9ULL8 1493 aa36.89■■■■□ 3.5
ATP1A1-208ENST00000488733 SCRIBQ14160 1630 aa36.63■■■■□ 3.46
ATP1A1-208ENST00000488733 UNC13AQ9UPW8 1703 aa36.19■■■■□ 3.38
ATP1A1-208ENST00000488733 BICRAQ9NZM4 1560 aa35.88■■■■□ 3.33
ATP1A1-208ENST00000488733 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
ATP1A1-208ENST00000488733 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
ATP1A1-208ENST00000488733 CECR2Q9BXF3 1484 aa35.42■■■■□ 3.26
ATP1A1-208ENST00000488733 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
ATP1A1-208ENST00000488733 RSF1Q96T23 1441 aaPredicted RBP35.22■■■■□ 3.23
ATP1A1-208ENST00000488733 MROH2BQ7Z745 1585 aa35.18■■■■□ 3.22
ATP1A1-208ENST00000488733 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
ATP1A1-208ENST00000488733 WIZO95785 1651 aa34.85■■■■□ 3.17
ATP1A1-208ENST00000488733 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
ATP1A1-208ENST00000488733 PEG3Q9GZU2 1588 aa34.7■■■■□ 3.15
ATP1A1-208ENST00000488733 ATAD2BQ9ULI0 1458 aa34.62■■■■□ 3.13
ATP1A1-208ENST00000488733 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
ATP1A1-208ENST00000488733 TOP2AP11388 1531 aaKnown RBP34.53■■■■□ 3.12
ATP1A1-208ENST00000488733 BAZ1BQ9UIG0 1483 aaKnown RBP34.41■■■■□ 3.1
ATP1A1-208ENST00000488733 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
ATP1A1-208ENST00000488733 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
ATP1A1-208ENST00000488733 HMGXB3Q12766 1538 aa34.32■■■■□ 3.08
ATP1A1-208ENST00000488733 CHIC1Q5VXU3 224 aa34.22■■■■□ 3.07
ATP1A1-208ENST00000488733 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
ATP1A1-208ENST00000488733 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
ATP1A1-208ENST00000488733 TRIM41Q8WV44 630 aa33.54■■■□□ 2.96
ATP1A1-208ENST00000488733 CFTRP13569 1480 aa33.53■■■□□ 2.96
ATP1A1-208ENST00000488733 CADPSQ9ULU8 1353 aa33.48■■■□□ 2.95
ATP1A1-208ENST00000488733 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
ATP1A1-208ENST00000488733 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
ATP1A1-208ENST00000488733 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
ATP1A1-208ENST00000488733 NESP48681 1621 aa33.27■■■□□ 2.92
ATP1A1-208ENST00000488733 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
ATP1A1-208ENST00000488733 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
ATP1A1-208ENST00000488733 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
ATP1A1-208ENST00000488733 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
ATP1A1-208ENST00000488733 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
ATP1A1-208ENST00000488733 TOP2BQ02880 1626 aa32.93■■■□□ 2.86
ATP1A1-208ENST00000488733 CUX1P39880 1505 aa32.93■■■□□ 2.86
ATP1A1-208ENST00000488733 BIVM-ERCC5R4GMW8 1640 aa32.89■■■□□ 2.86
ATP1A1-208ENST00000488733 LOC105371045A0A1W2PR82 267 aa32.88■■■□□ 2.85
ATP1A1-208ENST00000488733 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
ATP1A1-208ENST00000488733 FAM9AQ8IZU1 332 aaPredicted RBP32.85■■■□□ 2.85
ATP1A1-208ENST00000488733 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
ATP1A1-208ENST00000488733 EEA1Q15075 1411 aa32.73■■■□□ 2.83
ATP1A1-208ENST00000488733 URB2Q14146 1524 aaKnown RBP32.71■■■□□ 2.83
ATP1A1-208ENST00000488733 TOPBP1Q92547 1522 aa32.71■■■□□ 2.83
ATP1A1-208ENST00000488733 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
ATP1A1-208ENST00000488733 MRC2Q9UBG0 1479 aa32.64■■■□□ 2.81
ATP1A1-208ENST00000488733 SOGA1O94964 1423 aa32.63■■■□□ 2.81
ATP1A1-208ENST00000488733 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
ATP1A1-208ENST00000488733 POLA1P09884 1462 aaPredicted RBP32.53■■■□□ 2.8
ATP1A1-208ENST00000488733 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
ATP1A1-208ENST00000488733 RUSC2Q8N2Y8 1516 aa32.49■■■□□ 2.79
ATP1A1-208ENST00000488733 WDR62O43379 1518 aa32.47■■■□□ 2.79
ATP1A1-208ENST00000488733 THOC2Q8NI27 1593 aaKnown RBP32.44■■■□□ 2.78
ATP1A1-208ENST00000488733 RAD54L2Q9Y4B4 1467 aa32.4■■■□□ 2.78
ATP1A1-208ENST00000488733 KIF27Q86VH2 1401 aa32.37■■■□□ 2.77
ATP1A1-208ENST00000488733 CUX2O14529 1486 aa32.35■■■□□ 2.77
ATP1A1-208ENST00000488733 ABCA10Q8WWZ4 1543 aa32.34■■■□□ 2.77
ATP1A1-208ENST00000488733 EHMT2Q96KQ7 1210 aa32.32■■■□□ 2.76
ATP1A1-208ENST00000488733 WDR97A6NE52 1622 aa32.24■■■□□ 2.75
ATP1A1-208ENST00000488733 TARBP1Q13395 1621 aaKnown RBP32.24■■■□□ 2.75
ATP1A1-208ENST00000488733 KIF21BO75037 1637 aa32.23■■■□□ 2.75
ATP1A1-208ENST00000488733 GOLGA3Q08378 1498 aa32.23■■■□□ 2.75
ATP1A1-208ENST00000488733 TNIKQ9UKE5 1360 aa32.19■■■□□ 2.74
ATP1A1-208ENST00000488733 IFT140Q96RY7 1462 aa32.18■■■□□ 2.74
ATP1A1-208ENST00000488733 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
ATP1A1-208ENST00000488733 IGF1RP08069 1367 aa32.1■■■□□ 2.73
ATP1A1-208ENST00000488733 ABCA5Q8WWZ7 1642 aa32.09■■■□□ 2.73
ATP1A1-208ENST00000488733 UBTFP17480 764 aaKnown RBP32.08■■■□□ 2.73
ATP1A1-208ENST00000488733 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
ATP1A1-208ENST00000488733 PRXQ9BXM0 1461 aa32.05■■■□□ 2.72
ATP1A1-208ENST00000488733 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
ATP1A1-208ENST00000488733 ZNF608Q9ULD9 1512 aaPredicted RBP31.99■■■□□ 2.71
ATP1A1-208ENST00000488733 RAPGEF2Q9Y4G8 1499 aa31.98■■■□□ 2.71
ATP1A1-208ENST00000488733 CEP162Q5TB80 1403 aa31.98■■■□□ 2.71
ATP1A1-208ENST00000488733 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.711e-11■■■■□ 24.7
ATP1A1-208ENST00000488733 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
ATP1A1-208ENST00000488733 CUL7Q14999 1698 aa31.89■■■□□ 2.7
ATP1A1-208ENST00000488733 EIF4G3O43432 1585 aaKnown RBP31.89■■■□□ 2.69
ATP1A1-208ENST00000488733 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
ATP1A1-208ENST00000488733 PBRM1Q86U86 1689 aa31.87■■■□□ 2.69
ATP1A1-208ENST00000488733 ADAMTS12P58397 1594 aa31.71■■■□□ 2.67
ATP1A1-208ENST00000488733 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
ATP1A1-208ENST00000488733 CLIP1P30622 1438 aa31.71■■■□□ 2.67
ATP1A1-208ENST00000488733 SNAPC4Q5SXM2 1469 aa31.69■■■□□ 2.66
ATP1A1-208ENST00000488733 MAGI1Q96QZ7 1491 aaPredicted RBP31.65■■■□□ 2.66
ATP1A1-208ENST00000488733 TRIM26Q12899 539 aaPredicted RBP31.63■■■□□ 2.65
ATP1A1-208ENST00000488733 PCGF6Q9BYE7 350 aa31.59■■■□□ 2.65
ATP1A1-208ENST00000488733 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
ATP1A1-208ENST00000488733 GRIN2AQ12879 1464 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms