RNA–Protein interactions for RNA: ENST00000497914.5

URGCP-213, Transcript of upregulator of cell proliferation, humanhuman

TSL 1 (best)

Gene URGCP, Length 4,360 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-213ENST00000497914 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
URGCP-213ENST00000497914 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
URGCP-213ENST00000497914 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
URGCP-213ENST00000497914 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
URGCP-213ENST00000497914 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
URGCP-213ENST00000497914 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
URGCP-213ENST00000497914 HRCP23327 699 aa28.24■■■□□ 2.11
URGCP-213ENST00000497914 PPARGC1BQ86YN6 1023 aaKnown RBP28.22■■■□□ 2.11
URGCP-213ENST00000497914 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
URGCP-213ENST00000497914 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.07
URGCP-213ENST00000497914 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
URGCP-213ENST00000497914 TTBK1Q5TCY1 1321 aaPredicted RBP27.51■■□□□ 1.99
URGCP-213ENST00000497914 TRIM26Q12899 539 aaPredicted RBP27.39■■□□□ 1.98
URGCP-213ENST00000497914 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
URGCP-213ENST00000497914 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
URGCP-213ENST00000497914 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
URGCP-213ENST00000497914 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
URGCP-213ENST00000497914 PELP1Q8IZL8 1130 aaKnown RBP26.85■■□□□ 1.89
URGCP-213ENST00000497914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.81■■□□□ 1.88
URGCP-213ENST00000497914 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
URGCP-213ENST00000497914 CENPBP07199 599 aaPredicted RBP26.67■■□□□ 1.86
URGCP-213ENST00000497914 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
URGCP-213ENST00000497914 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
URGCP-213ENST00000497914 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.83
URGCP-213ENST00000497914 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
URGCP-213ENST00000497914 UBTFP17480 764 aaKnown RBP26.44■■□□□ 1.82
URGCP-213ENST00000497914 DIEXFQ68CQ4 756 aaKnown RBP26.39■■□□□ 1.81
URGCP-213ENST00000497914 GTF3C3Q9Y5Q9 886 aa26.37■■□□□ 1.81
URGCP-213ENST00000497914 APLP2Q06481 763 aa26.28■■□□□ 1.8
URGCP-213ENST00000497914 HNRNPUL2Q1KMD3 747 aaKnown RBP26.22■■□□□ 1.79
URGCP-213ENST00000497914 ACIN1Q9UKV3 1341 aaKnown RBP26.19■■□□□ 1.78
URGCP-213ENST00000497914 NEUROD1Q13562 356 aa26.19■■□□□ 1.78
URGCP-213ENST00000497914 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
URGCP-213ENST00000497914 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
URGCP-213ENST00000497914 ITGAEP38570 1179 aa25.76■■□□□ 1.71
URGCP-213ENST00000497914 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
URGCP-213ENST00000497914 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
URGCP-213ENST00000497914 MYT1Q01538 1121 aa25.7■■□□□ 1.7
URGCP-213ENST00000497914 ABCC9O60706 1549 aa25.65■■□□□ 1.7
URGCP-213ENST00000497914 ATP1B4Q9UN42 357 aaPredicted RBP25.57■■□□□ 1.68
URGCP-213ENST00000497914 MIER1Q8N108 512 aa25.55■■□□□ 1.68
URGCP-213ENST00000497914 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
URGCP-213ENST00000497914 BCANQ96GW7 911 aa25.47■■□□□ 1.67
URGCP-213ENST00000497914 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
URGCP-213ENST00000497914 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
URGCP-213ENST00000497914 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
URGCP-213ENST00000497914 NEFLP07196 543 aa25.26■■□□□ 1.63
URGCP-213ENST00000497914 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
URGCP-213ENST00000497914 ERICH6Q7L0X2 663 aa25.12■■□□□ 1.61
URGCP-213ENST00000497914 CNGB1Q14028 1251 aaPredicted RBP25.01■■□□□ 1.59
URGCP-213ENST00000497914 SOGA1O94964 1423 aa25■■□□□ 1.59
URGCP-213ENST00000497914 FAM50AQ14320 339 aaKnown RBP24.98■■□□□ 1.59
URGCP-213ENST00000497914 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
URGCP-213ENST00000497914 FKBP8Q14318 412 aa24.9■■□□□ 1.58
URGCP-213ENST00000497914 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
URGCP-213ENST00000497914 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
URGCP-213ENST00000497914 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
URGCP-213ENST00000497914 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
URGCP-213ENST00000497914 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
URGCP-213ENST00000497914 CLIP1P30622 1438 aa24.82■■□□□ 1.56
URGCP-213ENST00000497914 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
URGCP-213ENST00000497914 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
URGCP-213ENST00000497914 SUPT16HQ9Y5B9 1047 aaKnown RBP24.77■■□□□ 1.56
URGCP-213ENST00000497914 WIZO95785 1651 aa24.73■■□□□ 1.55
URGCP-213ENST00000497914 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
URGCP-213ENST00000497914 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
URGCP-213ENST00000497914 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
URGCP-213ENST00000497914 ANP32CO43423 234 aa24.66■■□□□ 1.54
URGCP-213ENST00000497914 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
URGCP-213ENST00000497914 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
URGCP-213ENST00000497914 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
URGCP-213ENST00000497914 KANK4Q5T7N3 995 aaPredicted RBP24.52■■□□□ 1.51
URGCP-213ENST00000497914 SIN3AQ96ST3 1273 aa24.5■■□□□ 1.51
URGCP-213ENST00000497914 EEA1Q15075 1411 aa24.49■■□□□ 1.51
URGCP-213ENST00000497914 ANP32EQ9BTT0 268 aa24.47■■□□□ 1.51
URGCP-213ENST00000497914 TSHZ2Q9NRE2 1034 aa24.45■■□□□ 1.5
URGCP-213ENST00000497914 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
URGCP-213ENST00000497914 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
URGCP-213ENST00000497914 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
URGCP-213ENST00000497914 CDK11AQ9UQ88 783 aaPredicted RBP24.41■■□□□ 1.5
URGCP-213ENST00000497914 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
URGCP-213ENST00000497914 NACADO15069 1562 aa24.37■■□□□ 1.49
URGCP-213ENST00000497914 ARID3CA6NKF2 412 aa24.35■■□□□ 1.49
URGCP-213ENST00000497914 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.49
URGCP-213ENST00000497914 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
URGCP-213ENST00000497914 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
URGCP-213ENST00000497914 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
URGCP-213ENST00000497914 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
URGCP-213ENST00000497914 DHX57Q6P158 1386 aaKnown RBP24.2■■□□□ 1.47
URGCP-213ENST00000497914 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
URGCP-213ENST00000497914 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
URGCP-213ENST00000497914 RBM19Q9Y4C8 960 aaKnown RBP24.18■■□□□ 1.46
URGCP-213ENST00000497914 BCL11AQ9H165 835 aa24.15■■□□□ 1.46
URGCP-213ENST00000497914 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.46
URGCP-213ENST00000497914 NBR1Q14596 966 aa24.11■■□□□ 1.45
URGCP-213ENST00000497914 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
URGCP-213ENST00000497914 RAB3GAP2Q9H2M9 1393 aa24.05■■□□□ 1.44
URGCP-213ENST00000497914 RTL5Q5HYW3 569 aaPredicted RBP24.03■■□□□ 1.44
URGCP-213ENST00000497914 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
URGCP-213ENST00000497914 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms