RNA–Protein interactions for RNA: ENST00000393829.6

ATP6V0A1-203, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-203ENST00000393829 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
ATP6V0A1-203ENST00000393829 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
ATP6V0A1-203ENST00000393829 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
ATP6V0A1-203ENST00000393829 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
ATP6V0A1-203ENST00000393829 SUPT5HO00267 1087 aaKnown RBP25.07■■□□□ 1.6
ATP6V0A1-203ENST00000393829 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
ATP6V0A1-203ENST00000393829 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
ATP6V0A1-203ENST00000393829 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
ATP6V0A1-203ENST00000393829 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
ATP6V0A1-203ENST00000393829 HRCP23327 699 aa24.14■■□□□ 1.45
ATP6V0A1-203ENST00000393829 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
ATP6V0A1-203ENST00000393829 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
ATP6V0A1-203ENST00000393829 ABCC9O60706 1549 aa23.79■■□□□ 1.4
ATP6V0A1-203ENST00000393829 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
ATP6V0A1-203ENST00000393829 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
ATP6V0A1-203ENST00000393829 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
ATP6V0A1-203ENST00000393829 TRIM26Q12899 539 aaPredicted RBP23.45■■□□□ 1.34
ATP6V0A1-203ENST00000393829 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.34
ATP6V0A1-203ENST00000393829 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
ATP6V0A1-203ENST00000393829 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
ATP6V0A1-203ENST00000393829 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
ATP6V0A1-203ENST00000393829 NACADO15069 1562 aa23.16■■□□□ 1.3
ATP6V0A1-203ENST00000393829 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
ATP6V0A1-203ENST00000393829 ZEB1P37275 1124 aaPredicted RBP23.01■■□□□ 1.27
ATP6V0A1-203ENST00000393829 WIZO95785 1651 aa23.01■■□□□ 1.27
ATP6V0A1-203ENST00000393829 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
ATP6V0A1-203ENST00000393829 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
ATP6V0A1-203ENST00000393829 EIF4G1Q04637 1599 aaKnown RBP22.81■■□□□ 1.24
ATP6V0A1-203ENST00000393829 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
ATP6V0A1-203ENST00000393829 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
ATP6V0A1-203ENST00000393829 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
ATP6V0A1-203ENST00000393829 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
ATP6V0A1-203ENST00000393829 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
ATP6V0A1-203ENST00000393829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
ATP6V0A1-203ENST00000393829 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
ATP6V0A1-203ENST00000393829 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
ATP6V0A1-203ENST00000393829 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
ATP6V0A1-203ENST00000393829 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
ATP6V0A1-203ENST00000393829 SOGA1O94964 1423 aa22.39■■□□□ 1.18
ATP6V0A1-203ENST00000393829 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
ATP6V0A1-203ENST00000393829 TNIKQ9UKE5 1360 aa22.32■■□□□ 1.16
ATP6V0A1-203ENST00000393829 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
ATP6V0A1-203ENST00000393829 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
ATP6V0A1-203ENST00000393829 EEA1Q15075 1411 aa22.28■■□□□ 1.16
ATP6V0A1-203ENST00000393829 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
ATP6V0A1-203ENST00000393829 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
ATP6V0A1-203ENST00000393829 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
ATP6V0A1-203ENST00000393829 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
ATP6V0A1-203ENST00000393829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
ATP6V0A1-203ENST00000393829 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
ATP6V0A1-203ENST00000393829 DIEXFQ68CQ4 756 aaKnown RBP22.11■■□□□ 1.13
ATP6V0A1-203ENST00000393829 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
ATP6V0A1-203ENST00000393829 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
ATP6V0A1-203ENST00000393829 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
ATP6V0A1-203ENST00000393829 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
ATP6V0A1-203ENST00000393829 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
ATP6V0A1-203ENST00000393829 KIF21BO75037 1637 aa22■■□□□ 1.11
ATP6V0A1-203ENST00000393829 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
ATP6V0A1-203ENST00000393829 CLIP1P30622 1438 aa21.92■■□□□ 1.1
ATP6V0A1-203ENST00000393829 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.1
ATP6V0A1-203ENST00000393829 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.1
ATP6V0A1-203ENST00000393829 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
ATP6V0A1-203ENST00000393829 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
ATP6V0A1-203ENST00000393829 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
ATP6V0A1-203ENST00000393829 GTF3C3Q9Y5Q9 886 aa21.84■■□□□ 1.09
ATP6V0A1-203ENST00000393829 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
ATP6V0A1-203ENST00000393829 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
ATP6V0A1-203ENST00000393829 APLP2Q06481 763 aa21.71■■□□□ 1.07
ATP6V0A1-203ENST00000393829 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
ATP6V0A1-203ENST00000393829 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
ATP6V0A1-203ENST00000393829 MIER1Q8N108 512 aa21.63■■□□□ 1.05
ATP6V0A1-203ENST00000393829 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
ATP6V0A1-203ENST00000393829 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
ATP6V0A1-203ENST00000393829 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
ATP6V0A1-203ENST00000393829 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
ATP6V0A1-203ENST00000393829 CUX1P39880 1505 aa21.49■■□□□ 1.03
ATP6V0A1-203ENST00000393829 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
ATP6V0A1-203ENST00000393829 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
ATP6V0A1-203ENST00000393829 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
ATP6V0A1-203ENST00000393829 CLSPNQ9HAW4 1339 aa21.45■■□□□ 1.02
ATP6V0A1-203ENST00000393829 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
ATP6V0A1-203ENST00000393829 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
ATP6V0A1-203ENST00000393829 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.01
ATP6V0A1-203ENST00000393829 CFTRP13569 1480 aa21.34■■□□□ 1.01
ATP6V0A1-203ENST00000393829 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
ATP6V0A1-203ENST00000393829 CUX2O14529 1486 aa21.3■■□□□ 1
ATP6V0A1-203ENST00000393829 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
ATP6V0A1-203ENST00000393829 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
ATP6V0A1-203ENST00000393829 IGF1RP08069 1367 aa21.18■□□□□ 0.98
ATP6V0A1-203ENST00000393829 ITGAEP38570 1179 aa21.17■□□□□ 0.98
ATP6V0A1-203ENST00000393829 TIAM1Q13009 1591 aa21.14■□□□□ 0.97
ATP6V0A1-203ENST00000393829 RAB3GAP2Q9H2M9 1393 aa21.12■□□□□ 0.97
ATP6V0A1-203ENST00000393829 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
ATP6V0A1-203ENST00000393829 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
ATP6V0A1-203ENST00000393829 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.97
ATP6V0A1-203ENST00000393829 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
ATP6V0A1-203ENST00000393829 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
ATP6V0A1-203ENST00000393829 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
ATP6V0A1-203ENST00000393829 PHLDB1Q86UU1 1377 aa21.02■□□□□ 0.96
ATP6V0A1-203ENST00000393829 SETD5Q9C0A6 1442 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms