RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
SPIN1-201ENST00000375859 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
SPIN1-201ENST00000375859 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
SPIN1-201ENST00000375859 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
SPIN1-201ENST00000375859 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
SPIN1-201ENST00000375859 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
SPIN1-201ENST00000375859 ABCC9O60706 1549 aa21.98■■□□□ 1.11
SPIN1-201ENST00000375859 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
SPIN1-201ENST00000375859 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
SPIN1-201ENST00000375859 NACADO15069 1562 aa21.27■□□□□ 0.99
SPIN1-201ENST00000375859 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
SPIN1-201ENST00000375859 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
SPIN1-201ENST00000375859 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
SPIN1-201ENST00000375859 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.96
SPIN1-201ENST00000375859 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
SPIN1-201ENST00000375859 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
SPIN1-201ENST00000375859 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
SPIN1-201ENST00000375859 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
SPIN1-201ENST00000375859 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
SPIN1-201ENST00000375859 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
SPIN1-201ENST00000375859 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
SPIN1-201ENST00000375859 WIZO95785 1651 aa20.59■□□□□ 0.89
SPIN1-201ENST00000375859 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
SPIN1-201ENST00000375859 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
SPIN1-201ENST00000375859 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
SPIN1-201ENST00000375859 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
SPIN1-201ENST00000375859 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
SPIN1-201ENST00000375859 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
SPIN1-201ENST00000375859 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
SPIN1-201ENST00000375859 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
SPIN1-201ENST00000375859 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.8
SPIN1-201ENST00000375859 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
SPIN1-201ENST00000375859 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
SPIN1-201ENST00000375859 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
SPIN1-201ENST00000375859 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
SPIN1-201ENST00000375859 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
SPIN1-201ENST00000375859 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
SPIN1-201ENST00000375859 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.76
SPIN1-201ENST00000375859 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.76
SPIN1-201ENST00000375859 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
SPIN1-201ENST00000375859 SOGA1O94964 1423 aa19.81■□□□□ 0.76
SPIN1-201ENST00000375859 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
SPIN1-201ENST00000375859 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
SPIN1-201ENST00000375859 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
SPIN1-201ENST00000375859 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
SPIN1-201ENST00000375859 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
SPIN1-201ENST00000375859 SYNJ1O43426 1573 aa19.58■□□□□ 0.72
SPIN1-201ENST00000375859 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
SPIN1-201ENST00000375859 HRCP23327 699 aa19.52■□□□□ 0.72
SPIN1-201ENST00000375859 EEA1Q15075 1411 aa19.49■□□□□ 0.71
SPIN1-201ENST00000375859 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
SPIN1-201ENST00000375859 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
SPIN1-201ENST00000375859 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
SPIN1-201ENST00000375859 CFTRP13569 1480 aa19.43■□□□□ 0.7
SPIN1-201ENST00000375859 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
SPIN1-201ENST00000375859 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
SPIN1-201ENST00000375859 APLP2Q06481 763 aa19.37■□□□□ 0.69
SPIN1-201ENST00000375859 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
SPIN1-201ENST00000375859 CUX1P39880 1505 aa19.33■□□□□ 0.69
SPIN1-201ENST00000375859 NESP48681 1621 aa19.32■□□□□ 0.68
SPIN1-201ENST00000375859 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
SPIN1-201ENST00000375859 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
SPIN1-201ENST00000375859 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
SPIN1-201ENST00000375859 CLIP1P30622 1438 aa19.27■□□□□ 0.68
SPIN1-201ENST00000375859 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
SPIN1-201ENST00000375859 CUX2O14529 1486 aa19.24■□□□□ 0.67
SPIN1-201ENST00000375859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
SPIN1-201ENST00000375859 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
SPIN1-201ENST00000375859 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SPIN1-201ENST00000375859 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
SPIN1-201ENST00000375859 CCER1Q8TC90 406 aaPredicted RBP19.15■□□□□ 0.66
SPIN1-201ENST00000375859 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
SPIN1-201ENST00000375859 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
SPIN1-201ENST00000375859 KIF21BO75037 1637 aa19.12■□□□□ 0.65
SPIN1-201ENST00000375859 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
SPIN1-201ENST00000375859 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
SPIN1-201ENST00000375859 IGF1RP08069 1367 aa19.07■□□□□ 0.64
SPIN1-201ENST00000375859 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
SPIN1-201ENST00000375859 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
SPIN1-201ENST00000375859 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
SPIN1-201ENST00000375859 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.63
SPIN1-201ENST00000375859 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
SPIN1-201ENST00000375859 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
SPIN1-201ENST00000375859 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
SPIN1-201ENST00000375859 PRDM2Q13029 1718 aa18.96■□□□□ 0.63
SPIN1-201ENST00000375859 ITGAEP38570 1179 aa18.94■□□□□ 0.62
SPIN1-201ENST00000375859 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
SPIN1-201ENST00000375859 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
SPIN1-201ENST00000375859 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
SPIN1-201ENST00000375859 URB2Q14146 1524 aaKnown RBP18.92■□□□□ 0.62
SPIN1-201ENST00000375859 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
SPIN1-201ENST00000375859 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
SPIN1-201ENST00000375859 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
SPIN1-201ENST00000375859 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
SPIN1-201ENST00000375859 FBLN2P98095 1184 aa18.81■□□□□ 0.6
SPIN1-201ENST00000375859 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
SPIN1-201ENST00000375859 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
SPIN1-201ENST00000375859 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
SPIN1-201ENST00000375859 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
SPIN1-201ENST00000375859 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms