RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-208ENST00000443203 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
NELFA-208ENST00000443203 ABCC9O60706 1549 aa30.04■■■□□ 2.4
NELFA-208ENST00000443203 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
NELFA-208ENST00000443203 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
NELFA-208ENST00000443203 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
NELFA-208ENST00000443203 NACADO15069 1562 aa28.27■■■□□ 2.12
NELFA-208ENST00000443203 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
NELFA-208ENST00000443203 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
NELFA-208ENST00000443203 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
NELFA-208ENST00000443203 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
NELFA-208ENST00000443203 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
NELFA-208ENST00000443203 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
NELFA-208ENST00000443203 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
NELFA-208ENST00000443203 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
NELFA-208ENST00000443203 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
NELFA-208ENST00000443203 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
NELFA-208ENST00000443203 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
NELFA-208ENST00000443203 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
NELFA-208ENST00000443203 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
NELFA-208ENST00000443203 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
NELFA-208ENST00000443203 CUX2O14529 1486 aa26.01■■□□□ 1.75
NELFA-208ENST00000443203 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
NELFA-208ENST00000443203 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
NELFA-208ENST00000443203 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
NELFA-208ENST00000443203 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
NELFA-208ENST00000443203 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
NELFA-208ENST00000443203 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
NELFA-208ENST00000443203 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
NELFA-208ENST00000443203 NESP48681 1621 aa25.73■■□□□ 1.71
NELFA-208ENST00000443203 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
NELFA-208ENST00000443203 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
NELFA-208ENST00000443203 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
NELFA-208ENST00000443203 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
NELFA-208ENST00000443203 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
NELFA-208ENST00000443203 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
NELFA-208ENST00000443203 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
NELFA-208ENST00000443203 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
NELFA-208ENST00000443203 WIZO95785 1651 aa25.31■■□□□ 1.64
NELFA-208ENST00000443203 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
NELFA-208ENST00000443203 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
NELFA-208ENST00000443203 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
NELFA-208ENST00000443203 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
NELFA-208ENST00000443203 WDR62O43379 1518 aa25.09■■□□□ 1.61
NELFA-208ENST00000443203 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
NELFA-208ENST00000443203 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
NELFA-208ENST00000443203 CFTRP13569 1480 aa24.98■■□□□ 1.59
NELFA-208ENST00000443203 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
NELFA-208ENST00000443203 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
NELFA-208ENST00000443203 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
NELFA-208ENST00000443203 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
NELFA-208ENST00000443203 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
NELFA-208ENST00000443203 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
NELFA-208ENST00000443203 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
NELFA-208ENST00000443203 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
NELFA-208ENST00000443203 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
NELFA-208ENST00000443203 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
NELFA-208ENST00000443203 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.485e-7■■■■□ 22.5
NELFA-208ENST00000443203 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
NELFA-208ENST00000443203 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
NELFA-208ENST00000443203 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
NELFA-208ENST00000443203 CHD1O14646 1710 aa24.22■■□□□ 1.47
NELFA-208ENST00000443203 FBLN2P98095 1184 aa24.22■■□□□ 1.47
NELFA-208ENST00000443203 SOGA1O94964 1423 aa24.18■■□□□ 1.46
NELFA-208ENST00000443203 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
NELFA-208ENST00000443203 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
NELFA-208ENST00000443203 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
NELFA-208ENST00000443203 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
NELFA-208ENST00000443203 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
NELFA-208ENST00000443203 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
NELFA-208ENST00000443203 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
NELFA-208ENST00000443203 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
NELFA-208ENST00000443203 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
NELFA-208ENST00000443203 CUX1P39880 1505 aa24.01■■□□□ 1.43
NELFA-208ENST00000443203 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
NELFA-208ENST00000443203 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
NELFA-208ENST00000443203 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
NELFA-208ENST00000443203 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
NELFA-208ENST00000443203 SYNJ2O15056 1496 aa23.9■■□□□ 1.42
NELFA-208ENST00000443203 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
NELFA-208ENST00000443203 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
NELFA-208ENST00000443203 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
NELFA-208ENST00000443203 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
NELFA-208ENST00000443203 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
NELFA-208ENST00000443203 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
NELFA-208ENST00000443203 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
NELFA-208ENST00000443203 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
NELFA-208ENST00000443203 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
NELFA-208ENST00000443203 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 NUP160Q12769 1436 aa23.57■■□□□ 1.36
NELFA-208ENST00000443203 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
NELFA-208ENST00000443203 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
NELFA-208ENST00000443203 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
NELFA-208ENST00000443203 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
NELFA-208ENST00000443203 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
NELFA-208ENST00000443203 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms