RNA–Protein interactions for RNA: ENST00000588138.1

ATP6V0A1-217, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-217ENST00000588138 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
ATP6V0A1-217ENST00000588138 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
ATP6V0A1-217ENST00000588138 ABCC9O60706 1549 aa23.67■■□□□ 1.38
ATP6V0A1-217ENST00000588138 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
ATP6V0A1-217ENST00000588138 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
ATP6V0A1-217ENST00000588138 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
ATP6V0A1-217ENST00000588138 NACADO15069 1562 aa22.85■■□□□ 1.25
ATP6V0A1-217ENST00000588138 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
ATP6V0A1-217ENST00000588138 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
ATP6V0A1-217ENST00000588138 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
ATP6V0A1-217ENST00000588138 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
ATP6V0A1-217ENST00000588138 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
ATP6V0A1-217ENST00000588138 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
ATP6V0A1-217ENST00000588138 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
ATP6V0A1-217ENST00000588138 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
ATP6V0A1-217ENST00000588138 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
ATP6V0A1-217ENST00000588138 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
ATP6V0A1-217ENST00000588138 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
ATP6V0A1-217ENST00000588138 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
ATP6V0A1-217ENST00000588138 SMARCA4P51532 1647 aa21.33■■□□□ 1
ATP6V0A1-217ENST00000588138 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
ATP6V0A1-217ENST00000588138 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
ATP6V0A1-217ENST00000588138 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
ATP6V0A1-217ENST00000588138 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
ATP6V0A1-217ENST00000588138 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
ATP6V0A1-217ENST00000588138 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
ATP6V0A1-217ENST00000588138 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
ATP6V0A1-217ENST00000588138 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
ATP6V0A1-217ENST00000588138 WIZO95785 1651 aa21.02■□□□□ 0.95
ATP6V0A1-217ENST00000588138 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
ATP6V0A1-217ENST00000588138 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
ATP6V0A1-217ENST00000588138 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
ATP6V0A1-217ENST00000588138 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
ATP6V0A1-217ENST00000588138 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
ATP6V0A1-217ENST00000588138 CFTRP13569 1480 aa20.43■□□□□ 0.86
ATP6V0A1-217ENST00000588138 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
ATP6V0A1-217ENST00000588138 NESP48681 1621 aa20.41■□□□□ 0.86
ATP6V0A1-217ENST00000588138 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
ATP6V0A1-217ENST00000588138 CUX2O14529 1486 aa20.3■□□□□ 0.84
ATP6V0A1-217ENST00000588138 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
ATP6V0A1-217ENST00000588138 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
ATP6V0A1-217ENST00000588138 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
ATP6V0A1-217ENST00000588138 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-217ENST00000588138 CEP164Q9UPV0 1460 aa20.13■□□□□ 0.81
ATP6V0A1-217ENST00000588138 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
ATP6V0A1-217ENST00000588138 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
ATP6V0A1-217ENST00000588138 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
ATP6V0A1-217ENST00000588138 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
ATP6V0A1-217ENST00000588138 WDR62O43379 1518 aa19.98■□□□□ 0.79
ATP6V0A1-217ENST00000588138 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
ATP6V0A1-217ENST00000588138 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
ATP6V0A1-217ENST00000588138 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
ATP6V0A1-217ENST00000588138 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
ATP6V0A1-217ENST00000588138 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
ATP6V0A1-217ENST00000588138 CUX1P39880 1505 aa19.91■□□□□ 0.78
ATP6V0A1-217ENST00000588138 BIVM-ERCC5R4GMW8 1640 aa19.88■□□□□ 0.77
ATP6V0A1-217ENST00000588138 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
ATP6V0A1-217ENST00000588138 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
ATP6V0A1-217ENST00000588138 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
ATP6V0A1-217ENST00000588138 FGD5Q6ZNL6 1462 aa19.76■□□□□ 0.75
ATP6V0A1-217ENST00000588138 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
ATP6V0A1-217ENST00000588138 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
ATP6V0A1-217ENST00000588138 SOGA1O94964 1423 aa19.68■□□□□ 0.74
ATP6V0A1-217ENST00000588138 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
ATP6V0A1-217ENST00000588138 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
ATP6V0A1-217ENST00000588138 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
ATP6V0A1-217ENST00000588138 EEA1Q15075 1411 aa19.59■□□□□ 0.73
ATP6V0A1-217ENST00000588138 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
ATP6V0A1-217ENST00000588138 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
ATP6V0A1-217ENST00000588138 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
ATP6V0A1-217ENST00000588138 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
ATP6V0A1-217ENST00000588138 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
ATP6V0A1-217ENST00000588138 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
ATP6V0A1-217ENST00000588138 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
ATP6V0A1-217ENST00000588138 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.713e-7■■■■■ 43.1
ATP6V0A1-217ENST00000588138 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
ATP6V0A1-217ENST00000588138 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
ATP6V0A1-217ENST00000588138 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
ATP6V0A1-217ENST00000588138 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
ATP6V0A1-217ENST00000588138 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
ATP6V0A1-217ENST00000588138 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
ATP6V0A1-217ENST00000588138 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
ATP6V0A1-217ENST00000588138 IGF1RP08069 1367 aa19.36■□□□□ 0.69
ATP6V0A1-217ENST00000588138 CUL7Q14999 1698 aa19.32■□□□□ 0.68
ATP6V0A1-217ENST00000588138 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
ATP6V0A1-217ENST00000588138 KIF21BO75037 1637 aa19.3■□□□□ 0.68
ATP6V0A1-217ENST00000588138 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
ATP6V0A1-217ENST00000588138 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
ATP6V0A1-217ENST00000588138 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
ATP6V0A1-217ENST00000588138 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
ATP6V0A1-217ENST00000588138 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
ATP6V0A1-217ENST00000588138 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
ATP6V0A1-217ENST00000588138 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
ATP6V0A1-217ENST00000588138 CHD1O14646 1710 aa19.22■□□□□ 0.67
ATP6V0A1-217ENST00000588138 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
ATP6V0A1-217ENST00000588138 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
ATP6V0A1-217ENST00000588138 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
ATP6V0A1-217ENST00000588138 FBLN2P98095 1184 aa19.17■□□□□ 0.66
ATP6V0A1-217ENST00000588138 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
ATP6V0A1-217ENST00000588138 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms