RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 NISCHQ9Y2I1 1504 aa53.82■■■■■ 6.21
USF2-201ENST00000222305 CCDC180Q9P1Z9 1646 aa47.38■■■■■ 5.18
USF2-201ENST00000222305 ABCC9O60706 1549 aa45.43■■■■■ 4.86
USF2-201ENST00000222305 ZCCHC6Q5VYS8 1495 aaKnown RBP45.08■■■■■ 4.81
USF2-201ENST00000222305 DCAF8L2P0C7V8 631 aa44.6■■■■■ 4.73
USF2-201ENST00000222305 DCAF1Q9Y4B6 1507 aa44.5■■■■■ 4.71
USF2-201ENST00000222305 MYO15BQ96JP2 1530 aa44.23■■■■■ 4.67
USF2-201ENST00000222305 NACADO15069 1562 aa44.22■■■■■ 4.67
USF2-201ENST00000222305 RB1CC1Q8TDY2 1594 aa44.04■■■■■ 4.64
USF2-201ENST00000222305 SCRIBQ14160 1630 aa43.44■■■■■ 4.54
USF2-201ENST00000222305 SHROOM4Q9ULL8 1493 aa43.35■■■■■ 4.53
USF2-201ENST00000222305 UNC13AQ9UPW8 1703 aa43.29■■■■■ 4.52
USF2-201ENST00000222305 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
USF2-201ENST00000222305 PABPN1Q86U42 306 aaKnown RBP eCLIP42.64■■■■■ 4.428e-7■□□□□ 11.1
USF2-201ENST00000222305 CECR2Q9BXF3 1484 aa41.87■■■■■ 4.29
USF2-201ENST00000222305 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.25
USF2-201ENST00000222305 SMARCA4P51532 1647 aa41.59■■■■■ 4.25
USF2-201ENST00000222305 MROH2BQ7Z745 1585 aa41.57■■■■■ 4.24
USF2-201ENST00000222305 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
USF2-201ENST00000222305 RSF1Q96T23 1441 aaPredicted RBP41.43■■■■■ 4.22
USF2-201ENST00000222305 SUPT5HO00267 1087 aaKnown RBP41.3■■■■■ 4.2
USF2-201ENST00000222305 WIZO95785 1651 aa41.25■■■■■ 4.19
USF2-201ENST00000222305 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
USF2-201ENST00000222305 PEG3Q9GZU2 1588 aa41.08■■■■■ 4.17
USF2-201ENST00000222305 ATAD2BQ9ULI0 1458 aa41.01■■■■■ 4.15
USF2-201ENST00000222305 SMARCA2P51531 1590 aa41■■■■■ 4.15
USF2-201ENST00000222305 DNAJC5BQ9UF47 199 aa40.9■■■■■ 4.14
USF2-201ENST00000222305 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
USF2-201ENST00000222305 BAZ1BQ9UIG0 1483 aaKnown RBP40.76■■■■■ 4.12
USF2-201ENST00000222305 TOP2AP11388 1531 aaKnown RBP40.76■■■■■ 4.12
USF2-201ENST00000222305 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
USF2-201ENST00000222305 CCDC88BA6NC98 1476 aa40.28■■■■■ 4.04
USF2-201ENST00000222305 CFTRP13569 1480 aa39.67■■■■□ 3.94
USF2-201ENST00000222305 CADPSQ9ULU8 1353 aa39.65■■■■□ 3.94
USF2-201ENST00000222305 PRDM2Q13029 1718 aa39.64■■■■□ 3.94
USF2-201ENST00000222305 NESP48681 1621 aa39.62■■■■□ 3.93
USF2-201ENST00000222305 LAMC3Q9Y6N6 1575 aa39.58■■■■□ 3.93
USF2-201ENST00000222305 ABCC8Q09428 1581 aa39.27■■■■□ 3.88
USF2-201ENST00000222305 FANCD2Q9BXW9 1451 aa39.26■■■■□ 3.87
USF2-201ENST00000222305 KIF21AQ7Z4S6 1674 aa39.24■■■■□ 3.87
USF2-201ENST00000222305 PDS5BQ9NTI5 1447 aa39.21■■■■□ 3.87
USF2-201ENST00000222305 CHIC1Q5VXU3 224 aa39.14■■■■□ 3.86
USF2-201ENST00000222305 CEP164Q9UPV0 1460 aa39.1■■■■□ 3.85
USF2-201ENST00000222305 ERCC6Q03468 1493 aa39.04■■■■□ 3.84
USF2-201ENST00000222305 WRNQ14191 1432 aaPredicted RBP eCLIP39.03■■■■□ 3.84
USF2-201ENST00000222305 SYNJ1O43426 1573 aa38.97■■■■□ 3.83
USF2-201ENST00000222305 CUX1P39880 1505 aa38.92■■■■□ 3.82
USF2-201ENST00000222305 BIVM-ERCC5R4GMW8 1640 aa38.88■■■■□ 3.81
USF2-201ENST00000222305 TRIM41Q8WV44 630 aa38.87■■■■□ 3.81
USF2-201ENST00000222305 TOP2BQ02880 1626 aa38.86■■■■□ 3.81
USF2-201ENST00000222305 URB2Q14146 1524 aaKnown RBP38.83■■■■□ 3.81
USF2-201ENST00000222305 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
USF2-201ENST00000222305 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
USF2-201ENST00000222305 TOPBP1Q92547 1522 aa38.77■■■■□ 3.8
USF2-201ENST00000222305 THOC2Q8NI27 1593 aaKnown RBP38.75■■■■□ 3.79
USF2-201ENST00000222305 WDR62O43379 1518 aa38.65■■■■□ 3.78
USF2-201ENST00000222305 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
USF2-201ENST00000222305 POLA1P09884 1462 aaPredicted RBP38.52■■■■□ 3.76
USF2-201ENST00000222305 RAD54L2Q9Y4B4 1467 aa38.38■■■■□ 3.73
USF2-201ENST00000222305 SOGA1O94964 1423 aa38.34■■■■□ 3.73
USF2-201ENST00000222305 CUX2O14529 1486 aa38.33■■■■□ 3.73
USF2-201ENST00000222305 WDR97A6NE52 1622 aa38.3■■■■□ 3.72
USF2-201ENST00000222305 TARBP1Q13395 1621 aaKnown RBP38.3■■■■□ 3.72
USF2-201ENST00000222305 RUSC2Q8N2Y8 1516 aa38.23■■■■□ 3.71
USF2-201ENST00000222305 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
USF2-201ENST00000222305 IFT140Q96RY7 1462 aa38.18■■■■□ 3.7
USF2-201ENST00000222305 FAM9AQ8IZU1 332 aaPredicted RBP38.16■■■■□ 3.7
USF2-201ENST00000222305 KIF27Q86VH2 1401 aa38.09■■■■□ 3.69
USF2-201ENST00000222305 ABCA5Q8WWZ7 1642 aa38.05■■■■□ 3.68
USF2-201ENST00000222305 EEA1Q15075 1411 aa38.05■■■■□ 3.68
USF2-201ENST00000222305 TDRD9Q8NDG6 1382 aaKnown RBP38.03■■■■□ 3.68
USF2-201ENST00000222305 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
USF2-201ENST00000222305 EIF4G3O43432 1585 aaKnown RBP37.96■■■■□ 3.67
USF2-201ENST00000222305 AQRO60306 1485 aaKnown RBP eCLIP37.93■■■■□ 3.661e-7■■■■□ 23
USF2-201ENST00000222305 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
USF2-201ENST00000222305 PBRM1Q86U86 1689 aa37.93■■■■□ 3.66
USF2-201ENST00000222305 CSRNP3Q8WYN3 585 aa37.88■■■■□ 3.65
USF2-201ENST00000222305 IGF1RP08069 1367 aa37.8■■■■□ 3.64
USF2-201ENST00000222305 ERICH3Q5RHP9 1530 aa37.79■■■■□ 3.64
USF2-201ENST00000222305 GRIN2BQ13224 1484 aa37.74■■■■□ 3.63
USF2-201ENST00000222305 CUL7Q14999 1698 aa37.71■■■■□ 3.63
USF2-201ENST00000222305 KIF21BO75037 1637 aa37.69■■■■□ 3.62
USF2-201ENST00000222305 EHMT2Q96KQ7 1210 aa37.67■■■■□ 3.62
USF2-201ENST00000222305 PRXQ9BXM0 1461 aa37.66■■■■□ 3.62
USF2-201ENST00000222305 LOC105371045A0A1W2PR82 267 aa37.61■■■■□ 3.61
USF2-201ENST00000222305 SNAPC4Q5SXM2 1469 aa37.61■■■■□ 3.61
USF2-201ENST00000222305 CARMIL1Q5VZK9 1371 aa37.61■■■■□ 3.61
USF2-201ENST00000222305 ADAMTS12P58397 1594 aa37.6■■■■□ 3.61
USF2-201ENST00000222305 RAPGEF2Q9Y4G8 1499 aa37.57■■■■□ 3.61
USF2-201ENST00000222305 GOLGA3Q08378 1498 aa37.53■■■■□ 3.6
USF2-201ENST00000222305 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
USF2-201ENST00000222305 FHAD1B1AJZ9 1412 aa37.49■■■■□ 3.59
USF2-201ENST00000222305 SYNJ2O15056 1496 aa37.38■■■■□ 3.58
USF2-201ENST00000222305 UBTFP17480 764 aaKnown RBP37.35■■■■□ 3.57
USF2-201ENST00000222305 CHD1O14646 1710 aa37.34■■■■□ 3.57
USF2-201ENST00000222305 GRIN2AQ12879 1464 aa37.3■■■■□ 3.56
USF2-201ENST00000222305 FBLN2P98095 1184 aa37.29■■■■□ 3.56
USF2-201ENST00000222305 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
USF2-201ENST00000222305 CTTNBP2Q8WZ74 1663 aa37.26■■■■□ 3.56
USF2-201ENST00000222305 TNIKQ9UKE5 1360 aa37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms