RNA–Protein interactions for RNA: ENST00000411638.6

NELFA-203, Transcript of negative elongation factor complex member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFA, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-203ENST00000411638 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
NELFA-203ENST00000411638 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
NELFA-203ENST00000411638 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
NELFA-203ENST00000411638 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
NELFA-203ENST00000411638 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.25
NELFA-203ENST00000411638 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
NELFA-203ENST00000411638 MYO15BQ96JP2 1530 aa28.78■■■□□ 2.2
NELFA-203ENST00000411638 ABCC9O60706 1549 aa28.6■■■□□ 2.17
NELFA-203ENST00000411638 NACADO15069 1562 aa28.46■■■□□ 2.15
NELFA-203ENST00000411638 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
NELFA-203ENST00000411638 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
NELFA-203ENST00000411638 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
NELFA-203ENST00000411638 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
NELFA-203ENST00000411638 UNC13AQ9UPW8 1703 aa27.63■■■□□ 2.01
NELFA-203ENST00000411638 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
NELFA-203ENST00000411638 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
NELFA-203ENST00000411638 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
NELFA-203ENST00000411638 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
NELFA-203ENST00000411638 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
NELFA-203ENST00000411638 WIZO95785 1651 aa27.19■■□□□ 1.94
NELFA-203ENST00000411638 SMARCA4P51532 1647 aa27.13■■□□□ 1.93
NELFA-203ENST00000411638 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
NELFA-203ENST00000411638 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
NELFA-203ENST00000411638 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
NELFA-203ENST00000411638 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
NELFA-203ENST00000411638 EIF4G1Q04637 1599 aaKnown RBP26.65■■□□□ 1.86
NELFA-203ENST00000411638 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
NELFA-203ENST00000411638 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
NELFA-203ENST00000411638 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
NELFA-203ENST00000411638 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
NELFA-203ENST00000411638 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
NELFA-203ENST00000411638 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
NELFA-203ENST00000411638 HMGXB3Q12766 1538 aa26.26■■□□□ 1.8
NELFA-203ENST00000411638 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
NELFA-203ENST00000411638 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
NELFA-203ENST00000411638 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
NELFA-203ENST00000411638 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
NELFA-203ENST00000411638 SYNJ1O43426 1573 aa25.87■■□□□ 1.73
NELFA-203ENST00000411638 EEA1Q15075 1411 aa25.83■■□□□ 1.72
NELFA-203ENST00000411638 CFTRP13569 1480 aa25.82■■□□□ 1.72
NELFA-203ENST00000411638 SOGA1O94964 1423 aa25.81■■□□□ 1.72
NELFA-203ENST00000411638 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
NELFA-203ENST00000411638 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
NELFA-203ENST00000411638 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
NELFA-203ENST00000411638 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
NELFA-203ENST00000411638 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
NELFA-203ENST00000411638 EHMT2Q96KQ7 1210 aa25.64■■□□□ 1.7
NELFA-203ENST00000411638 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
NELFA-203ENST00000411638 CUX1P39880 1505 aa25.57■■□□□ 1.68
NELFA-203ENST00000411638 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
NELFA-203ENST00000411638 HRCP23327 699 aa25.52■■□□□ 1.68
NELFA-203ENST00000411638 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
NELFA-203ENST00000411638 KIF21BO75037 1637 aa25.49■■□□□ 1.67
NELFA-203ENST00000411638 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
NELFA-203ENST00000411638 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
NELFA-203ENST00000411638 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
NELFA-203ENST00000411638 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
NELFA-203ENST00000411638 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
NELFA-203ENST00000411638 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
NELFA-203ENST00000411638 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
NELFA-203ENST00000411638 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
NELFA-203ENST00000411638 NESP48681 1621 aa25.27■■□□□ 1.64
NELFA-203ENST00000411638 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
NELFA-203ENST00000411638 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
NELFA-203ENST00000411638 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
NELFA-203ENST00000411638 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.63
NELFA-203ENST00000411638 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
NELFA-203ENST00000411638 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
NELFA-203ENST00000411638 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
NELFA-203ENST00000411638 CUX2O14529 1486 aa25.11■■□□□ 1.61
NELFA-203ENST00000411638 CLIP1P30622 1438 aa25.08■■□□□ 1.61
NELFA-203ENST00000411638 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.6
NELFA-203ENST00000411638 IGF1RP08069 1367 aa25.05■■□□□ 1.6
NELFA-203ENST00000411638 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
NELFA-203ENST00000411638 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
NELFA-203ENST00000411638 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
NELFA-203ENST00000411638 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
NELFA-203ENST00000411638 PPARGC1BQ86YN6 1023 aaKnown RBP24.97■■□□□ 1.59
NELFA-203ENST00000411638 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
NELFA-203ENST00000411638 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
NELFA-203ENST00000411638 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
NELFA-203ENST00000411638 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
NELFA-203ENST00000411638 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
NELFA-203ENST00000411638 CUL7Q14999 1698 aa24.79■■□□□ 1.56
NELFA-203ENST00000411638 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
NELFA-203ENST00000411638 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
NELFA-203ENST00000411638 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
NELFA-203ENST00000411638 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
NELFA-203ENST00000411638 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
NELFA-203ENST00000411638 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
NELFA-203ENST00000411638 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
NELFA-203ENST00000411638 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
NELFA-203ENST00000411638 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
NELFA-203ENST00000411638 APLP2Q06481 763 aa24.64■■□□□ 1.54
NELFA-203ENST00000411638 WDR62O43379 1518 aa24.61■■□□□ 1.53
NELFA-203ENST00000411638 CTTNBP2Q8WZ74 1663 aa24.59■■□□□ 1.53
NELFA-203ENST00000411638 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
NELFA-203ENST00000411638 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
NELFA-203ENST00000411638 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
NELFA-203ENST00000411638 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms