RNA–Protein interactions for RNA: ENST00000531266.5

FNTA-209, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 5

Gene FNTA, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-209ENST00000531266 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
FNTA-209ENST00000531266 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
FNTA-209ENST00000531266 ABCC9O60706 1549 aa23.23■■□□□ 1.31
FNTA-209ENST00000531266 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
FNTA-209ENST00000531266 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
FNTA-209ENST00000531266 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
FNTA-209ENST00000531266 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
FNTA-209ENST00000531266 NACADO15069 1562 aa22.79■■□□□ 1.24
FNTA-209ENST00000531266 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
FNTA-209ENST00000531266 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
FNTA-209ENST00000531266 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
FNTA-209ENST00000531266 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
FNTA-209ENST00000531266 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
FNTA-209ENST00000531266 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
FNTA-209ENST00000531266 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
FNTA-209ENST00000531266 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
FNTA-209ENST00000531266 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
FNTA-209ENST00000531266 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
FNTA-209ENST00000531266 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
FNTA-209ENST00000531266 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
FNTA-209ENST00000531266 WIZO95785 1651 aa21.24■□□□□ 0.99
FNTA-209ENST00000531266 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
FNTA-209ENST00000531266 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
FNTA-209ENST00000531266 SMARCA2P51531 1590 aa21.14■□□□□ 0.98
FNTA-209ENST00000531266 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
FNTA-209ENST00000531266 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
FNTA-209ENST00000531266 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
FNTA-209ENST00000531266 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
FNTA-209ENST00000531266 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
FNTA-209ENST00000531266 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
FNTA-209ENST00000531266 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
FNTA-209ENST00000531266 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
FNTA-209ENST00000531266 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
FNTA-209ENST00000531266 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
FNTA-209ENST00000531266 CFTRP13569 1480 aa20.37■□□□□ 0.85
FNTA-209ENST00000531266 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
FNTA-209ENST00000531266 NESP48681 1621 aa20.29■□□□□ 0.84
FNTA-209ENST00000531266 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
FNTA-209ENST00000531266 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
FNTA-209ENST00000531266 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
FNTA-209ENST00000531266 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
FNTA-209ENST00000531266 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
FNTA-209ENST00000531266 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
FNTA-209ENST00000531266 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
FNTA-209ENST00000531266 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
FNTA-209ENST00000531266 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
FNTA-209ENST00000531266 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
FNTA-209ENST00000531266 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
FNTA-209ENST00000531266 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
FNTA-209ENST00000531266 CUX1P39880 1505 aa20■□□□□ 0.79
FNTA-209ENST00000531266 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
FNTA-209ENST00000531266 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
FNTA-209ENST00000531266 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
FNTA-209ENST00000531266 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
FNTA-209ENST00000531266 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
FNTA-209ENST00000531266 WDR62O43379 1518 aa19.88■□□□□ 0.77
FNTA-209ENST00000531266 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
FNTA-209ENST00000531266 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
FNTA-209ENST00000531266 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
FNTA-209ENST00000531266 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
FNTA-209ENST00000531266 SOGA1O94964 1423 aa19.67■□□□□ 0.74
FNTA-209ENST00000531266 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
FNTA-209ENST00000531266 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
FNTA-209ENST00000531266 CUX2O14529 1486 aa19.65■□□□□ 0.74
FNTA-209ENST00000531266 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
FNTA-209ENST00000531266 EEA1Q15075 1411 aa19.63■□□□□ 0.73
FNTA-209ENST00000531266 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
FNTA-209ENST00000531266 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
FNTA-209ENST00000531266 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
FNTA-209ENST00000531266 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
FNTA-209ENST00000531266 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
FNTA-209ENST00000531266 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
FNTA-209ENST00000531266 CUL7Q14999 1698 aa19.51■□□□□ 0.71
FNTA-209ENST00000531266 GAPVD1Q14C86 1478 aa19.49■□□□□ 0.71
FNTA-209ENST00000531266 KIF21BO75037 1637 aa19.47■□□□□ 0.71
FNTA-209ENST00000531266 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
FNTA-209ENST00000531266 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
FNTA-209ENST00000531266 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
FNTA-209ENST00000531266 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
FNTA-209ENST00000531266 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.79e-7■■■□□ 18.2
FNTA-209ENST00000531266 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
FNTA-209ENST00000531266 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
FNTA-209ENST00000531266 IGF1RP08069 1367 aa19.36■□□□□ 0.69
FNTA-209ENST00000531266 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
FNTA-209ENST00000531266 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
FNTA-209ENST00000531266 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
FNTA-209ENST00000531266 CTTNBP2Q8WZ74 1663 aa19.32■□□□□ 0.68
FNTA-209ENST00000531266 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
FNTA-209ENST00000531266 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
FNTA-209ENST00000531266 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
FNTA-209ENST00000531266 CHD1O14646 1710 aa19.29■□□□□ 0.68
FNTA-209ENST00000531266 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
FNTA-209ENST00000531266 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
FNTA-209ENST00000531266 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
FNTA-209ENST00000531266 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
FNTA-209ENST00000531266 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
FNTA-209ENST00000531266 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
FNTA-209ENST00000531266 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
FNTA-209ENST00000531266 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
FNTA-209ENST00000531266 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms