RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 NISCHQ9Y2I1 1504 aa44.25■■■■■ 4.67
CLOCK-203ENST00000435527 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
CLOCK-203ENST00000435527 ABCC9O60706 1549 aa38.72■■■■□ 3.79
CLOCK-203ENST00000435527 DCAF8L2P0C7V8 631 aa37.13■■■■□ 3.53
CLOCK-203ENST00000435527 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
CLOCK-203ENST00000435527 NACADO15069 1562 aa37.06■■■■□ 3.52
CLOCK-203ENST00000435527 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
CLOCK-203ENST00000435527 ZCCHC6Q5VYS8 1495 aaKnown RBP36.8■■■■□ 3.48
CLOCK-203ENST00000435527 DCAF1Q9Y4B6 1507 aa36.59■■■■□ 3.45
CLOCK-203ENST00000435527 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
CLOCK-203ENST00000435527 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.39
CLOCK-203ENST00000435527 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
CLOCK-203ENST00000435527 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
CLOCK-203ENST00000435527 DNAJC5BQ9UF47 199 aa35.85■■■■□ 3.33
CLOCK-203ENST00000435527 SHROOM4Q9ULL8 1493 aa35.59■■■■□ 3.29
CLOCK-203ENST00000435527 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
CLOCK-203ENST00000435527 CC2D2AQ9P2K1 1620 aa34.97■■■■□ 3.19
CLOCK-203ENST00000435527 CECR2Q9BXF3 1484 aa34.81■■■■□ 3.16
CLOCK-203ENST00000435527 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
CLOCK-203ENST00000435527 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
CLOCK-203ENST00000435527 BAZ1AQ9NRL2 1556 aaPredicted RBP34.26■■■■□ 3.07
CLOCK-203ENST00000435527 ATAD2BQ9ULI0 1458 aa34.25■■■■□ 3.07
CLOCK-203ENST00000435527 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
CLOCK-203ENST00000435527 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
CLOCK-203ENST00000435527 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
CLOCK-203ENST00000435527 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
CLOCK-203ENST00000435527 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
CLOCK-203ENST00000435527 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.99
CLOCK-203ENST00000435527 WIZO95785 1651 aa33.68■■■□□ 2.98
CLOCK-203ENST00000435527 NESP48681 1621 aa33.47■■■□□ 2.95
CLOCK-203ENST00000435527 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
CLOCK-203ENST00000435527 TOP2AP11388 1531 aaKnown RBP33.31■■■□□ 2.92
CLOCK-203ENST00000435527 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
CLOCK-203ENST00000435527 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
CLOCK-203ENST00000435527 PDS5BQ9NTI5 1447 aa33.14■■■□□ 2.9
CLOCK-203ENST00000435527 CUX2O14529 1486 aa33.05■■■□□ 2.88
CLOCK-203ENST00000435527 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
CLOCK-203ENST00000435527 CFTRP13569 1480 aa33.01■■■□□ 2.88
CLOCK-203ENST00000435527 KIF21AQ7Z4S6 1674 aa32.95■■■□□ 2.87
CLOCK-203ENST00000435527 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
CLOCK-203ENST00000435527 FANCD2Q9BXW9 1451 aa32.84■■■□□ 2.85
CLOCK-203ENST00000435527 MRC2Q9UBG0 1479 aa32.78■■■□□ 2.84
CLOCK-203ENST00000435527 CEP164Q9UPV0 1460 aa32.77■■■□□ 2.84
CLOCK-203ENST00000435527 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
CLOCK-203ENST00000435527 WDR62O43379 1518 aa32.65■■■□□ 2.82
CLOCK-203ENST00000435527 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
CLOCK-203ENST00000435527 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
CLOCK-203ENST00000435527 DNAJC5Q9H3Z4 198 aa32.37■■■□□ 2.77
CLOCK-203ENST00000435527 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
CLOCK-203ENST00000435527 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
CLOCK-203ENST00000435527 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
CLOCK-203ENST00000435527 IFT140Q96RY7 1462 aa32.13■■■□□ 2.73
CLOCK-203ENST00000435527 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
CLOCK-203ENST00000435527 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.71
CLOCK-203ENST00000435527 CUX1P39880 1505 aa31.99■■■□□ 2.71
CLOCK-203ENST00000435527 TARBP1Q13395 1621 aaKnown RBP31.93■■■□□ 2.7
CLOCK-203ENST00000435527 SOGA1O94964 1423 aa31.92■■■□□ 2.7
CLOCK-203ENST00000435527 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
CLOCK-203ENST00000435527 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
CLOCK-203ENST00000435527 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.69
CLOCK-203ENST00000435527 EIF4G3O43432 1585 aaKnown RBP31.78■■■□□ 2.68
CLOCK-203ENST00000435527 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
CLOCK-203ENST00000435527 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
CLOCK-203ENST00000435527 WRNQ14191 1432 aaPredicted RBP eCLIP31.74■■■□□ 2.67
CLOCK-203ENST00000435527 TOP2BQ02880 1626 aa31.64■■■□□ 2.65
CLOCK-203ENST00000435527 SYNJ1O43426 1573 aa31.63■■■□□ 2.65
CLOCK-203ENST00000435527 WDR97A6NE52 1622 aa31.61■■■□□ 2.65
CLOCK-203ENST00000435527 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
CLOCK-203ENST00000435527 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
CLOCK-203ENST00000435527 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
CLOCK-203ENST00000435527 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
CLOCK-203ENST00000435527 FBLN2P98095 1184 aa31.5■■■□□ 2.63
CLOCK-203ENST00000435527 SNAPC4Q5SXM2 1469 aa31.48■■■□□ 2.63
CLOCK-203ENST00000435527 MAGI1Q96QZ7 1491 aaPredicted RBP31.43■■■□□ 2.62
CLOCK-203ENST00000435527 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
CLOCK-203ENST00000435527 CHMP7Q8WUX9 453 aaPredicted RBP31.4■■■□□ 2.62
CLOCK-203ENST00000435527 CHD1O14646 1710 aa31.38■■■□□ 2.61
CLOCK-203ENST00000435527 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
CLOCK-203ENST00000435527 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
CLOCK-203ENST00000435527 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
CLOCK-203ENST00000435527 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
CLOCK-203ENST00000435527 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
CLOCK-203ENST00000435527 ARHGEF11O15085 1522 aa31.15■■■□□ 2.58
CLOCK-203ENST00000435527 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
CLOCK-203ENST00000435527 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
CLOCK-203ENST00000435527 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
CLOCK-203ENST00000435527 CLASP1Q7Z460 1538 aa31.12■■■□□ 2.57
CLOCK-203ENST00000435527 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
CLOCK-203ENST00000435527 GRIN2AQ12879 1464 aa31.1■■■□□ 2.57
CLOCK-203ENST00000435527 KIF27Q86VH2 1401 aa31.09■■■□□ 2.57
CLOCK-203ENST00000435527 IGF1RP08069 1367 aa31.07■■■□□ 2.56
CLOCK-203ENST00000435527 NUP160Q12769 1436 aa31■■■□□ 2.55
CLOCK-203ENST00000435527 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
CLOCK-203ENST00000435527 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
CLOCK-203ENST00000435527 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
CLOCK-203ENST00000435527 CARMIL1Q5VZK9 1371 aa30.85■■■□□ 2.53
CLOCK-203ENST00000435527 RUSC2Q8N2Y8 1516 aa30.82■■■□□ 2.52
CLOCK-203ENST00000435527 CUL7Q14999 1698 aa30.81■■■□□ 2.52
CLOCK-203ENST00000435527 JPH4Q96JJ6 628 aa30.77■■■□□ 2.52
CLOCK-203ENST00000435527 SHROOM2Q13796 1616 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms