RNA–Protein interactions for RNA: ENST00000594064.5

USF2-205, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2 BASIC

Gene USF2, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-205ENST00000594064 NISCHQ9Y2I1 1504 aa46.46■■■■■ 5.03
USF2-205ENST00000594064 ABCC9O60706 1549 aa42.54■■■■■ 4.4
USF2-205ENST00000594064 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
USF2-205ENST00000594064 DNAJC5BQ9UF47 199 aa40.46■■■■■ 4.07
USF2-205ENST00000594064 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
USF2-205ENST00000594064 NACADO15069 1562 aa39.67■■■■□ 3.94
USF2-205ENST00000594064 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
USF2-205ENST00000594064 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
USF2-205ENST00000594064 UNC13AQ9UPW8 1703 aa39.35■■■■□ 3.89
USF2-205ENST00000594064 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
USF2-205ENST00000594064 MYO15BQ96JP2 1530 aa38.88■■■■□ 3.81
USF2-205ENST00000594064 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
USF2-205ENST00000594064 CC2D2AQ9P2K1 1620 aa38.35■■■■□ 3.73
USF2-205ENST00000594064 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
USF2-205ENST00000594064 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
USF2-205ENST00000594064 SHROOM4Q9ULL8 1493 aa38.23■■■■□ 3.71
USF2-205ENST00000594064 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
USF2-205ENST00000594064 EIF4G1Q04637 1599 aaKnown RBP38.11■■■■□ 3.69
USF2-205ENST00000594064 DNAJC5Q9H3Z4 198 aa37.36■■■■□ 3.57
USF2-205ENST00000594064 CUX2O14529 1486 aa36.71■■■■□ 3.47
USF2-205ENST00000594064 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
USF2-205ENST00000594064 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
USF2-205ENST00000594064 ATAD2BQ9ULI0 1458 aa36.53■■■■□ 3.44
USF2-205ENST00000594064 NESP48681 1621 aa36.44■■■■□ 3.42
USF2-205ENST00000594064 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
USF2-205ENST00000594064 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
USF2-205ENST00000594064 SMARCA2P51531 1590 aa36.32■■■■□ 3.41
USF2-205ENST00000594064 BAZ1BQ9UIG0 1483 aaKnown RBP36.13■■■■□ 3.37
USF2-205ENST00000594064 THOC2Q8NI27 1593 aaKnown RBP36.09■■■■□ 3.37
USF2-205ENST00000594064 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
USF2-205ENST00000594064 PEG3Q9GZU2 1588 aa35.95■■■■□ 3.35
USF2-205ENST00000594064 LAMC3Q9Y6N6 1575 aa35.91■■■■□ 3.34
USF2-205ENST00000594064 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
USF2-205ENST00000594064 MROH2BQ7Z745 1585 aa35.88■■■■□ 3.33
USF2-205ENST00000594064 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
USF2-205ENST00000594064 TRIM41Q8WV44 630 aa35.62■■■■□ 3.29
USF2-205ENST00000594064 CADPSQ9ULU8 1353 aa35.54■■■■□ 3.28
USF2-205ENST00000594064 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
USF2-205ENST00000594064 WIZO95785 1651 aa35.45■■■■□ 3.27
USF2-205ENST00000594064 WDR62O43379 1518 aa35.42■■■■□ 3.26
USF2-205ENST00000594064 CEP164Q9UPV0 1460 aa35.23■■■■□ 3.23
USF2-205ENST00000594064 FANCD2Q9BXW9 1451 aa35.18■■■■□ 3.22
USF2-205ENST00000594064 CFTRP13569 1480 aa35.03■■■■□ 3.2
USF2-205ENST00000594064 OSCARQ8IYS5 282 aa34.99■■■■□ 3.19
USF2-205ENST00000594064 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
USF2-205ENST00000594064 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
USF2-205ENST00000594064 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
USF2-205ENST00000594064 RIMBP3CA6NJZ7 1639 aa34.69■■■■□ 3.14
USF2-205ENST00000594064 RIMBP3BA6NNM3 1639 aa34.69■■■■□ 3.14
USF2-205ENST00000594064 RIMBP3Q9UFD9 1639 aa34.69■■■■□ 3.14
USF2-205ENST00000594064 ZNF608Q9ULD9 1512 aaPredicted RBP34.66■■■■□ 3.14
USF2-205ENST00000594064 PRDM2Q13029 1718 aa34.64■■■■□ 3.14
USF2-205ENST00000594064 IFT140Q96RY7 1462 aa34.52■■■■□ 3.12
USF2-205ENST00000594064 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
USF2-205ENST00000594064 ARHGEF11O15085 1522 aa34.49■■■■□ 3.11
USF2-205ENST00000594064 TOPBP1Q92547 1522 aa34.47■■■■□ 3.11
USF2-205ENST00000594064 EIF4G3O43432 1585 aaKnown RBP34.4■■■■□ 3.1
USF2-205ENST00000594064 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
USF2-205ENST00000594064 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.081e-7■■■■□ 23
USF2-205ENST00000594064 CHD1O14646 1710 aa34.27■■■■□ 3.08
USF2-205ENST00000594064 DNMBPQ6XZF7 1577 aa34.26■■■■□ 3.07
USF2-205ENST00000594064 TARBP1Q13395 1621 aaKnown RBP34.21■■■■□ 3.07
USF2-205ENST00000594064 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
USF2-205ENST00000594064 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
USF2-205ENST00000594064 FBLN2P98095 1184 aa34.13■■■■□ 3.05
USF2-205ENST00000594064 POLA1P09884 1462 aaPredicted RBP34.08■■■■□ 3.05
USF2-205ENST00000594064 TRHP20396 242 aaPredicted RBP34.08■■■■□ 3.05
USF2-205ENST00000594064 RAD54L2Q9Y4B4 1467 aa34.05■■■■□ 3.04
USF2-205ENST00000594064 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
USF2-205ENST00000594064 SOGA1O94964 1423 aa33.9■■■■□ 3.02
USF2-205ENST00000594064 SNAPC4Q5SXM2 1469 aa33.88■■■■□ 3.01
USF2-205ENST00000594064 FGD5Q6ZNL6 1462 aa33.82■■■■□ 3
USF2-205ENST00000594064 CLASP1Q7Z460 1538 aa33.81■■■■□ 3
USF2-205ENST00000594064 CHMP7Q8WUX9 453 aaPredicted RBP33.73■■■□□ 2.99
USF2-205ENST00000594064 CUX1P39880 1505 aa33.72■■■□□ 2.99
USF2-205ENST00000594064 SYNJ1O43426 1573 aa33.68■■■□□ 2.98
USF2-205ENST00000594064 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
USF2-205ENST00000594064 WDR97A6NE52 1622 aa33.65■■■□□ 2.98
USF2-205ENST00000594064 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
USF2-205ENST00000594064 SYNJ2O15056 1496 aa33.58■■■□□ 2.97
USF2-205ENST00000594064 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
USF2-205ENST00000594064 GAPVD1Q14C86 1478 aa33.47■■■□□ 2.95
USF2-205ENST00000594064 AEBP2Q6ZN18 517 aaPredicted RBP33.4■■■□□ 2.94
USF2-205ENST00000594064 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
USF2-205ENST00000594064 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
USF2-205ENST00000594064 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
USF2-205ENST00000594064 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
USF2-205ENST00000594064 GRIN2AQ12879 1464 aa33.23■■■□□ 2.91
USF2-205ENST00000594064 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
USF2-205ENST00000594064 ADAMTS12P58397 1594 aa33.17■■■□□ 2.9
USF2-205ENST00000594064 NUP160Q12769 1436 aa33.12■■■□□ 2.89
USF2-205ENST00000594064 WRNQ14191 1432 aaPredicted RBP eCLIP33.07■■■□□ 2.88
USF2-205ENST00000594064 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
USF2-205ENST00000594064 FHAD1B1AJZ9 1412 aa32.99■■■□□ 2.87
USF2-205ENST00000594064 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
USF2-205ENST00000594064 TOP2BQ02880 1626 aa32.97■■■□□ 2.87
USF2-205ENST00000594064 KIF13AQ9H1H9 1805 aa32.96■■■□□ 2.87
USF2-205ENST00000594064 PRG4Q92954 1404 aaPredicted RBP32.89■■■□□ 2.86
USF2-205ENST00000594064 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
USF2-205ENST00000594064 JPH4Q96JJ6 628 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms