RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 NISCHQ9Y2I1 1504 aa51.98■■■■■ 5.91
SPIN1-202ENST00000462844 CCDC180Q9P1Z9 1646 aa46.45■■■■■ 5.03
SPIN1-202ENST00000462844 ABCC9O60706 1549 aa45.79■■■■■ 4.92
SPIN1-202ENST00000462844 RB1CC1Q8TDY2 1594 aa43.97■■■■■ 4.63
SPIN1-202ENST00000462844 NACADO15069 1562 aa43.84■■■■■ 4.61
SPIN1-202ENST00000462844 DCAF8L2P0C7V8 631 aa43.56■■■■■ 4.56
SPIN1-202ENST00000462844 MYO15BQ96JP2 1530 aa43.5■■■■■ 4.55
SPIN1-202ENST00000462844 ZCCHC6Q5VYS8 1495 aaKnown RBP43.19■■■■■ 4.5
SPIN1-202ENST00000462844 DCAF1Q9Y4B6 1507 aa43.09■■■■■ 4.49
SPIN1-202ENST00000462844 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
SPIN1-202ENST00000462844 PABPN1Q86U42 306 aaKnown RBP eCLIP42.7■■■■■ 4.43
SPIN1-202ENST00000462844 BICRAQ9NZM4 1560 aa42.54■■■■■ 4.4
SPIN1-202ENST00000462844 DNAJC5BQ9UF47 199 aa42.44■■■■■ 4.38
SPIN1-202ENST00000462844 SHROOM4Q9ULL8 1493 aa42.31■■■■■ 4.36
SPIN1-202ENST00000462844 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
SPIN1-202ENST00000462844 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
SPIN1-202ENST00000462844 CC2D2AQ9P2K1 1620 aa41.43■■■■■ 4.22
SPIN1-202ENST00000462844 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
SPIN1-202ENST00000462844 NCAPD3P42695 1498 aa40.46■■■■■ 4.07
SPIN1-202ENST00000462844 SMARCA4P51532 1647 aa40.39■■■■■ 4.06
SPIN1-202ENST00000462844 BAZ1AQ9NRL2 1556 aaPredicted RBP40.36■■■■■ 4.05
SPIN1-202ENST00000462844 ATAD2BQ9ULI0 1458 aa40.33■■■■■ 4.05
SPIN1-202ENST00000462844 SMARCA2P51531 1590 aa40.33■■■■■ 4.05
SPIN1-202ENST00000462844 HMGXB3Q12766 1538 aa40.2■■■■■ 4.03
SPIN1-202ENST00000462844 PEG3Q9GZU2 1588 aa40.1■■■■■ 4.01
SPIN1-202ENST00000462844 BAZ1BQ9UIG0 1483 aaKnown RBP39.99■■■■□ 3.99
SPIN1-202ENST00000462844 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
SPIN1-202ENST00000462844 ERCC6Q03468 1493 aa39.6■■■■□ 3.93
SPIN1-202ENST00000462844 WIZO95785 1651 aa39.47■■■■□ 3.91
SPIN1-202ENST00000462844 NESP48681 1621 aa39.45■■■■□ 3.91
SPIN1-202ENST00000462844 LAMC3Q9Y6N6 1575 aa39.44■■■■□ 3.9
SPIN1-202ENST00000462844 CUX2O14529 1486 aa39.43■■■■□ 3.9
SPIN1-202ENST00000462844 RSF1Q96T23 1441 aaPredicted RBP39.4■■■■□ 3.9
SPIN1-202ENST00000462844 PDS5BQ9NTI5 1447 aa39.24■■■■□ 3.87
SPIN1-202ENST00000462844 CADPSQ9ULU8 1353 aa39.23■■■■□ 3.87
SPIN1-202ENST00000462844 TOP2AP11388 1531 aaKnown RBP39.14■■■■□ 3.86
SPIN1-202ENST00000462844 THOC2Q8NI27 1593 aaKnown RBP39■■■■□ 3.83
SPIN1-202ENST00000462844 KIF21AQ7Z4S6 1674 aa38.95■■■■□ 3.83
SPIN1-202ENST00000462844 CFTRP13569 1480 aa38.89■■■■□ 3.82
SPIN1-202ENST00000462844 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
SPIN1-202ENST00000462844 DNAJC5Q9H3Z4 198 aa38.77■■■■□ 3.8
SPIN1-202ENST00000462844 CEP164Q9UPV0 1460 aa38.75■■■■□ 3.79
SPIN1-202ENST00000462844 FANCD2Q9BXW9 1451 aa38.74■■■■□ 3.79
SPIN1-202ENST00000462844 WDR62O43379 1518 aa38.67■■■■□ 3.78
SPIN1-202ENST00000462844 CCDC88BA6NC98 1476 aa38.65■■■■□ 3.78
SPIN1-202ENST00000462844 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
SPIN1-202ENST00000462844 URB2Q14146 1524 aaKnown RBP38.33■■■■□ 3.73
SPIN1-202ENST00000462844 ABCC8Q09428 1581 aa38.17■■■■□ 3.7
SPIN1-202ENST00000462844 TOPBP1Q92547 1522 aa38.04■■■■□ 3.68
SPIN1-202ENST00000462844 IFT140Q96RY7 1462 aa38■■■■□ 3.67
SPIN1-202ENST00000462844 DNMBPQ6XZF7 1577 aa37.97■■■■□ 3.67
SPIN1-202ENST00000462844 SUPT5HO00267 1087 aaKnown RBP37.97■■■■□ 3.67
SPIN1-202ENST00000462844 ZNF608Q9ULD9 1512 aaPredicted RBP37.72■■■■□ 3.63
SPIN1-202ENST00000462844 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
SPIN1-202ENST00000462844 POLA1P09884 1462 aaPredicted RBP37.69■■■■□ 3.62
SPIN1-202ENST00000462844 TARBP1Q13395 1621 aaKnown RBP37.64■■■■□ 3.62
SPIN1-202ENST00000462844 EIF4G3O43432 1585 aaKnown RBP37.58■■■■□ 3.61
SPIN1-202ENST00000462844 SOGA1O94964 1423 aa37.57■■■■□ 3.6
SPIN1-202ENST00000462844 CUX1P39880 1505 aa37.54■■■■□ 3.6
SPIN1-202ENST00000462844 FGD5Q6ZNL6 1462 aa37.51■■■■□ 3.59
SPIN1-202ENST00000462844 AQRO60306 1485 aaKnown RBP eCLIP37.49■■■■□ 3.59
SPIN1-202ENST00000462844 WDR97A6NE52 1622 aa37.47■■■■□ 3.59
SPIN1-202ENST00000462844 RAD54L2Q9Y4B4 1467 aa37.46■■■■□ 3.59
SPIN1-202ENST00000462844 TDRD9Q8NDG6 1382 aaKnown RBP37.36■■■■□ 3.57
SPIN1-202ENST00000462844 GRIN2BQ13224 1484 aa37.21■■■■□ 3.55
SPIN1-202ENST00000462844 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
SPIN1-202ENST00000462844 ABCA10Q8WWZ4 1543 aa37.19■■■■□ 3.54
SPIN1-202ENST00000462844 MAGI1Q96QZ7 1491 aaPredicted RBP37.19■■■■□ 3.54
SPIN1-202ENST00000462844 FBLN2P98095 1184 aa37.17■■■■□ 3.54
SPIN1-202ENST00000462844 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
SPIN1-202ENST00000462844 TOP2BQ02880 1626 aa37.14■■■■□ 3.54
SPIN1-202ENST00000462844 CHD1O14646 1710 aa37.14■■■■□ 3.54
SPIN1-202ENST00000462844 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.54
SPIN1-202ENST00000462844 GAPVD1Q14C86 1478 aa37.12■■■■□ 3.53
SPIN1-202ENST00000462844 BIVM-ERCC5R4GMW8 1640 aa37.11■■■■□ 3.53
SPIN1-202ENST00000462844 CHMP7Q8WUX9 453 aaPredicted RBP37.06■■■■□ 3.52
SPIN1-202ENST00000462844 SYNJ2O15056 1496 aa37.02■■■■□ 3.52
SPIN1-202ENST00000462844 SYNJ1O43426 1573 aa37.01■■■■□ 3.52
SPIN1-202ENST00000462844 RIMBP3CA6NJZ7 1639 aa37.01■■■■□ 3.52
SPIN1-202ENST00000462844 RIMBP3BA6NNM3 1639 aa37.01■■■■□ 3.52
SPIN1-202ENST00000462844 ABCA5Q8WWZ7 1642 aa37.01■■■■□ 3.52
SPIN1-202ENST00000462844 RIMBP3Q9UFD9 1639 aa37.01■■■■□ 3.52
SPIN1-202ENST00000462844 ARHGEF11O15085 1522 aa37■■■■□ 3.51
SPIN1-202ENST00000462844 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
SPIN1-202ENST00000462844 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
SPIN1-202ENST00000462844 ERICH3Q5RHP9 1530 aa36.76■■■■□ 3.48
SPIN1-202ENST00000462844 FHAD1B1AJZ9 1412 aa36.71■■■■□ 3.47
SPIN1-202ENST00000462844 CYB5RLQ6IPT4 315 aa36.7■■■■□ 3.47
SPIN1-202ENST00000462844 GRIN2AQ12879 1464 aa36.69■■■■□ 3.46
SPIN1-202ENST00000462844 ADAMTS12P58397 1594 aa36.69■■■■□ 3.46
SPIN1-202ENST00000462844 ARAP1Q96P48 1450 aa36.64■■■■□ 3.46
SPIN1-202ENST00000462844 NUP160Q12769 1436 aa36.57■■■■□ 3.44
SPIN1-202ENST00000462844 KIF27Q86VH2 1401 aa36.5■■■■□ 3.43
SPIN1-202ENST00000462844 CEP170Q5SW79 1584 aa36.45■■■■□ 3.43
SPIN1-202ENST00000462844 IGF1RP08069 1367 aa36.38■■■■□ 3.41
SPIN1-202ENST00000462844 SHROOM2Q13796 1616 aa36.31■■■■□ 3.4
SPIN1-202ENST00000462844 CUL7Q14999 1698 aa36.3■■■■□ 3.4
SPIN1-202ENST00000462844 JPH4Q96JJ6 628 aa36.21■■■■□ 3.39
SPIN1-202ENST00000462844 PRG4Q92954 1404 aaPredicted RBP36.16■■■■□ 3.38
SPIN1-202ENST00000462844 CARMIL1Q5VZK9 1371 aa36.15■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms