RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
ATP2A3-213ENST00000574202 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
ATP2A3-213ENST00000574202 ABCC9O60706 1549 aa23.18■■□□□ 1.3
ATP2A3-213ENST00000574202 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
ATP2A3-213ENST00000574202 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
ATP2A3-213ENST00000574202 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
ATP2A3-213ENST00000574202 NACADO15069 1562 aa22.54■■□□□ 1.2
ATP2A3-213ENST00000574202 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
ATP2A3-213ENST00000574202 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
ATP2A3-213ENST00000574202 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
ATP2A3-213ENST00000574202 SCRIBQ14160 1630 aa22■■□□□ 1.11
ATP2A3-213ENST00000574202 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
ATP2A3-213ENST00000574202 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
ATP2A3-213ENST00000574202 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
ATP2A3-213ENST00000574202 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
ATP2A3-213ENST00000574202 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
ATP2A3-213ENST00000574202 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
ATP2A3-213ENST00000574202 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
ATP2A3-213ENST00000574202 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
ATP2A3-213ENST00000574202 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
ATP2A3-213ENST00000574202 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
ATP2A3-213ENST00000574202 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
ATP2A3-213ENST00000574202 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
ATP2A3-213ENST00000574202 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
ATP2A3-213ENST00000574202 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
ATP2A3-213ENST00000574202 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
ATP2A3-213ENST00000574202 WIZO95785 1651 aa20.83■□□□□ 0.92
ATP2A3-213ENST00000574202 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
ATP2A3-213ENST00000574202 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
ATP2A3-213ENST00000574202 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
ATP2A3-213ENST00000574202 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
ATP2A3-213ENST00000574202 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
ATP2A3-213ENST00000574202 NESP48681 1621 aa20.22■□□□□ 0.83
ATP2A3-213ENST00000574202 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
ATP2A3-213ENST00000574202 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
ATP2A3-213ENST00000574202 CFTRP13569 1480 aa20.18■□□□□ 0.82
ATP2A3-213ENST00000574202 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
ATP2A3-213ENST00000574202 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
ATP2A3-213ENST00000574202 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
ATP2A3-213ENST00000574202 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
ATP2A3-213ENST00000574202 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
ATP2A3-213ENST00000574202 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
ATP2A3-213ENST00000574202 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
ATP2A3-213ENST00000574202 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
ATP2A3-213ENST00000574202 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
ATP2A3-213ENST00000574202 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
ATP2A3-213ENST00000574202 WDR62O43379 1518 aa19.78■□□□□ 0.76
ATP2A3-213ENST00000574202 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
ATP2A3-213ENST00000574202 CUX1P39880 1505 aa19.72■□□□□ 0.75
ATP2A3-213ENST00000574202 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
ATP2A3-213ENST00000574202 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
ATP2A3-213ENST00000574202 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
ATP2A3-213ENST00000574202 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
ATP2A3-213ENST00000574202 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
ATP2A3-213ENST00000574202 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
ATP2A3-213ENST00000574202 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
ATP2A3-213ENST00000574202 CUX2O14529 1486 aa19.62■□□□□ 0.73
ATP2A3-213ENST00000574202 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
ATP2A3-213ENST00000574202 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
ATP2A3-213ENST00000574202 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
ATP2A3-213ENST00000574202 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
ATP2A3-213ENST00000574202 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
ATP2A3-213ENST00000574202 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
ATP2A3-213ENST00000574202 SOGA1O94964 1423 aa19.42■□□□□ 0.7
ATP2A3-213ENST00000574202 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
ATP2A3-213ENST00000574202 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
ATP2A3-213ENST00000574202 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
ATP2A3-213ENST00000574202 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
ATP2A3-213ENST00000574202 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
ATP2A3-213ENST00000574202 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.683e-7■■■■■ 36.6
ATP2A3-213ENST00000574202 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
ATP2A3-213ENST00000574202 EEA1Q15075 1411 aa19.27■□□□□ 0.68
ATP2A3-213ENST00000574202 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
ATP2A3-213ENST00000574202 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
ATP2A3-213ENST00000574202 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
ATP2A3-213ENST00000574202 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
ATP2A3-213ENST00000574202 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
ATP2A3-213ENST00000574202 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
ATP2A3-213ENST00000574202 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
ATP2A3-213ENST00000574202 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
ATP2A3-213ENST00000574202 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
ATP2A3-213ENST00000574202 IGF1RP08069 1367 aa19.11■□□□□ 0.65
ATP2A3-213ENST00000574202 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
ATP2A3-213ENST00000574202 CUL7Q14999 1698 aa19.05■□□□□ 0.64
ATP2A3-213ENST00000574202 KIF21BO75037 1637 aa19.03■□□□□ 0.64
ATP2A3-213ENST00000574202 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
ATP2A3-213ENST00000574202 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
ATP2A3-213ENST00000574202 CHD1O14646 1710 aa19.03■□□□□ 0.64
ATP2A3-213ENST00000574202 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
ATP2A3-213ENST00000574202 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.64
ATP2A3-213ENST00000574202 PRXQ9BXM0 1461 aa19■□□□□ 0.63
ATP2A3-213ENST00000574202 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
ATP2A3-213ENST00000574202 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
ATP2A3-213ENST00000574202 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
ATP2A3-213ENST00000574202 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
ATP2A3-213ENST00000574202 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
ATP2A3-213ENST00000574202 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
ATP2A3-213ENST00000574202 NUP160Q12769 1436 aa18.9■□□□□ 0.62
ATP2A3-213ENST00000574202 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
ATP2A3-213ENST00000574202 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms