RNA–Protein interactions for RNA: ENST00000544137.5

ATP6V0A1-205, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,047 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-205ENST00000544137 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
ATP6V0A1-205ENST00000544137 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
ATP6V0A1-205ENST00000544137 ABCC9O60706 1549 aa20.18■□□□□ 0.82
ATP6V0A1-205ENST00000544137 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
ATP6V0A1-205ENST00000544137 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
ATP6V0A1-205ENST00000544137 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
ATP6V0A1-205ENST00000544137 NACADO15069 1562 aa19.37■□□□□ 0.69
ATP6V0A1-205ENST00000544137 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
ATP6V0A1-205ENST00000544137 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
ATP6V0A1-205ENST00000544137 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
ATP6V0A1-205ENST00000544137 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
ATP6V0A1-205ENST00000544137 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
ATP6V0A1-205ENST00000544137 HRCP23327 699 aa19.12■□□□□ 0.65
ATP6V0A1-205ENST00000544137 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
ATP6V0A1-205ENST00000544137 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
ATP6V0A1-205ENST00000544137 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.63
ATP6V0A1-205ENST00000544137 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.635e-7■□□□□ 10.9
ATP6V0A1-205ENST00000544137 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
ATP6V0A1-205ENST00000544137 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
ATP6V0A1-205ENST00000544137 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
ATP6V0A1-205ENST00000544137 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
ATP6V0A1-205ENST00000544137 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-205ENST00000544137 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
ATP6V0A1-205ENST00000544137 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
ATP6V0A1-205ENST00000544137 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
ATP6V0A1-205ENST00000544137 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
ATP6V0A1-205ENST00000544137 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
ATP6V0A1-205ENST00000544137 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
ATP6V0A1-205ENST00000544137 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
ATP6V0A1-205ENST00000544137 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
ATP6V0A1-205ENST00000544137 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
ATP6V0A1-205ENST00000544137 WIZO95785 1651 aa18.11■□□□□ 0.49
ATP6V0A1-205ENST00000544137 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
ATP6V0A1-205ENST00000544137 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
ATP6V0A1-205ENST00000544137 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
ATP6V0A1-205ENST00000544137 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
ATP6V0A1-205ENST00000544137 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
ATP6V0A1-205ENST00000544137 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
ATP6V0A1-205ENST00000544137 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
ATP6V0A1-205ENST00000544137 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
ATP6V0A1-205ENST00000544137 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
ATP6V0A1-205ENST00000544137 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
ATP6V0A1-205ENST00000544137 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
ATP6V0A1-205ENST00000544137 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
ATP6V0A1-205ENST00000544137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
ATP6V0A1-205ENST00000544137 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
ATP6V0A1-205ENST00000544137 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
ATP6V0A1-205ENST00000544137 GTF3C3Q9Y5Q9 886 aa17.64■□□□□ 0.41
ATP6V0A1-205ENST00000544137 NESP48681 1621 aa17.58■□□□□ 0.4
ATP6V0A1-205ENST00000544137 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
ATP6V0A1-205ENST00000544137 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
ATP6V0A1-205ENST00000544137 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
ATP6V0A1-205ENST00000544137 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
ATP6V0A1-205ENST00000544137 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
ATP6V0A1-205ENST00000544137 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
ATP6V0A1-205ENST00000544137 CFTRP13569 1480 aa17.4■□□□□ 0.38
ATP6V0A1-205ENST00000544137 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
ATP6V0A1-205ENST00000544137 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
ATP6V0A1-205ENST00000544137 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
ATP6V0A1-205ENST00000544137 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
ATP6V0A1-205ENST00000544137 MYT1Q01538 1121 aa17.29■□□□□ 0.36
ATP6V0A1-205ENST00000544137 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
ATP6V0A1-205ENST00000544137 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
ATP6V0A1-205ENST00000544137 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
ATP6V0A1-205ENST00000544137 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
ATP6V0A1-205ENST00000544137 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
ATP6V0A1-205ENST00000544137 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
ATP6V0A1-205ENST00000544137 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
ATP6V0A1-205ENST00000544137 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
ATP6V0A1-205ENST00000544137 CUX1P39880 1505 aa17.08■□□□□ 0.32
ATP6V0A1-205ENST00000544137 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
ATP6V0A1-205ENST00000544137 MIER1Q8N108 512 aa17.07■□□□□ 0.32
ATP6V0A1-205ENST00000544137 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
ATP6V0A1-205ENST00000544137 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
ATP6V0A1-205ENST00000544137 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
ATP6V0A1-205ENST00000544137 WDR62O43379 1518 aa17■□□□□ 0.31
ATP6V0A1-205ENST00000544137 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
ATP6V0A1-205ENST00000544137 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
ATP6V0A1-205ENST00000544137 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
ATP6V0A1-205ENST00000544137 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
ATP6V0A1-205ENST00000544137 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
ATP6V0A1-205ENST00000544137 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
ATP6V0A1-205ENST00000544137 CUX2O14529 1486 aa16.91■□□□□ 0.3
ATP6V0A1-205ENST00000544137 SOGA1O94964 1423 aa16.88■□□□□ 0.29
ATP6V0A1-205ENST00000544137 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
ATP6V0A1-205ENST00000544137 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
ATP6V0A1-205ENST00000544137 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
ATP6V0A1-205ENST00000544137 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
ATP6V0A1-205ENST00000544137 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.281e-7■■■■■ 40.8
ATP6V0A1-205ENST00000544137 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
ATP6V0A1-205ENST00000544137 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
ATP6V0A1-205ENST00000544137 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
ATP6V0A1-205ENST00000544137 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
ATP6V0A1-205ENST00000544137 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
ATP6V0A1-205ENST00000544137 ABCA10Q8WWZ4 1543 aa16.74■□□□□ 0.27
ATP6V0A1-205ENST00000544137 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
ATP6V0A1-205ENST00000544137 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
ATP6V0A1-205ENST00000544137 GAPVD1Q14C86 1478 aa16.68■□□□□ 0.26
ATP6V0A1-205ENST00000544137 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
ATP6V0A1-205ENST00000544137 BCANQ96GW7 911 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms