Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 BLOC1S6-215ENST00000567523 1839 ntTSL 212.31□□□□□ -0.441e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-203ENST00000563000 622 ntTSL 410.83□□□□□ -0.681e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-216ENST00000567740 1051 ntTSL 28.75□□□□□ -1.011e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC8.23□□□□□ -1.091e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC7.94□□□□□ -1.141e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-210ENST00000565727 599 ntTSL 25.76□□□□□ -1.491e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.14□□□□□ -1.591e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.63□□□□□ -1.991e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-204ENST00000563160 581 ntTSL 42.41□□□□□ -2.021e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.32□□□□□ -2.041e-8■■■■□ 20.3
SUB1P53999 BLOC1S6-205ENST00000564310 636 ntTSL 32.08□□□□□ -2.081e-8■■■■□ 20.3
SUB1P53999 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.87■□□□□ 0.614e-26■■■■□ 20.3
SUB1P53999 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.93□□□□□ -0.664e-26■■■■□ 20.3
SUB1P53999 RPL27A-203ENST00000525981 297 ntTSL 510.52□□□□□ -0.734e-26■■■■□ 20.3
SUB1P53999 RPL27A-212ENST00000534599 651 ntTSL 59.93□□□□□ -0.824e-26■■■■□ 20.3
SUB1P53999 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC9.03□□□□□ -0.964e-26■■■■□ 20.3
SUB1P53999 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC8.49□□□□□ -1.054e-26■■■■□ 20.3
SUB1P53999 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.49□□□□□ -1.534e-26■■■■□ 20.3
SUB1P53999 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.745e-19■■■■□ 20.3
SUB1P53999 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.232e-9■■■■□ 20.3
SUB1P53999 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.352e-9■■■■□ 20.3
SUB1P53999 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.436e-14■■■■□ 20.3
SUB1P53999 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.596e-14■■■■□ 20.3
SUB1P53999 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.836e-14■■■■□ 20.3
SUB1P53999 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.096e-14■■■■□ 20.3
SUB1P53999 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.896e-14■■■■□ 20.3
SUB1P53999 BAG6-244ENST00000435080 1710 ntTSL 511.48□□□□□ -0.578e-8■■■■□ 20.2
SUB1P53999 BAG6-255ENST00000456622 859 ntTSL 59.42□□□□□ -0.98e-8■■■■□ 20.2
SUB1P53999 BAG6-239ENST00000424176 747 ntTSL 38.67□□□□□ -1.028e-8■■■■□ 20.2
SUB1P53999 RPL4-216ENST00000569438 565 ntTSL 510.62□□□□□ -0.711e-22■■■■□ 20.2
SUB1P53999 RPL4-212ENST00000566622 817 ntTSL 29.83□□□□□ -0.841e-22■■■■□ 20.2
SUB1P53999 RPL4-214ENST00000567229 2003 ntTSL 59.15□□□□□ -0.941e-22■■■■□ 20.2
SUB1P53999 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.011e-22■■■■□ 20.2
SUB1P53999 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC8.65□□□□□ -1.021e-22■■■■□ 20.2
SUB1P53999 RPL4-205ENST00000564439 582 ntTSL 38.19□□□□□ -1.11e-22■■■■□ 20.2
SUB1P53999 RPL4-217ENST00000569696 569 ntTSL 57.25□□□□□ -1.251e-22■■■■□ 20.2
SUB1P53999 RPL4-210ENST00000566039 1099 ntTSL 26.42□□□□□ -1.381e-22■■■■□ 20.2
SUB1P53999 RPL4-203ENST00000561775 1396 ntTSL 56.1□□□□□ -1.431e-22■■■■□ 20.2
SUB1P53999 AL137127.1-201ENST00000606379 3402 ntBASIC8.55□□□□□ -1.043e-8■■■■□ 20.2
SUB1P53999 UBR4-208ENST00000459947 3873 ntTSL 28.35□□□□□ -1.073e-8■■■■□ 20.2
SUB1P53999 UBR4-214ENST00000486515 536 ntTSL 35.56□□□□□ -1.523e-8■■■■□ 20.2
SUB1P53999 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.739e-8■■■■□ 20.2
SUB1P53999 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.669e-8■■■■□ 20.2
SUB1P53999 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.69e-8■■■■□ 20.2
SUB1P53999 OTUD5-205ENST00000455452 2077 ntTSL 515.98■□□□□ 0.159e-8■■■■□ 20.2
SUB1P53999 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.59■□□□□ 0.094e-6■■■■□ 20.2
SUB1P53999 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.024e-6■■■■□ 20.2
SUB1P53999 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.62□□□□□ -0.079e-8■■■■□ 20.2
SUB1P53999 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.142e-14■■■■□ 20.2
SUB1P53999 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.72□□□□□ -0.214e-6■■■■□ 20.2
SUB1P53999 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.47□□□□□ -0.254e-6■■■■□ 20.2
SUB1P53999 POR-212ENST00000447222 2332 ntTSL 513.41□□□□□ -0.269e-8■■■■□ 20.2
SUB1P53999 POR-216ENST00000454934 2295 ntTSL 313.23□□□□□ -0.299e-8■■■■□ 20.2
SUB1P53999 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.05□□□□□ -0.324e-6■■■■□ 20.2
SUB1P53999 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.329e-8■■■■□ 20.2
SUB1P53999 POR-222ENST00000493973 1028 ntTSL 212.84□□□□□ -0.359e-8■■■■□ 20.2
SUB1P53999 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.73□□□□□ -0.374e-6■■■■□ 20.2
SUB1P53999 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.52□□□□□ -0.419e-8■■■■□ 20.2
SUB1P53999 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)11.11□□□□□ -0.634e-6■■■■□ 20.2
SUB1P53999 SLC3A2-220ENST00000542922 2174 ntTSL 210.94□□□□□ -0.664e-6■■■■□ 20.2
SUB1P53999 SORD-205ENST00000559230 1502 ntTSL 1 (best)10.14□□□□□ -0.799e-8■■■■□ 20.2
SUB1P53999 ABCF1-206ENST00000479542 893 ntTSL 29.64□□□□□ -0.879e-8■■■■□ 20.2
SUB1P53999 SLC3A2-205ENST00000457660 873 ntTSL 59.5□□□□□ -0.894e-6■■■■□ 20.2
SUB1P53999 SORD-206ENST00000559562 864 ntTSL 59.17□□□□□ -0.949e-8■■■■□ 20.2
SUB1P53999 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.999e-8■■■■□ 20.2
SUB1P53999 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.039e-8■■■■□ 20.2
SUB1P53999 SLC3A2-217ENST00000541425 595 ntTSL 58.43□□□□□ -1.064e-6■■■■□ 20.2
SUB1P53999 ABCF1-205ENST00000475993 2860 ntTSL 1 (best)8.34□□□□□ -1.079e-8■■■■□ 20.2
SUB1P53999 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.099e-8■■■■□ 20.2
SUB1P53999 SLC3A2-215ENST00000539891 1300 ntTSL 1 (best)8.14□□□□□ -1.114e-6■■■■□ 20.2
SUB1P53999 SLC3A2-207ENST00000535768 597 ntTSL 57.59□□□□□ -1.194e-6■■■■□ 20.2
SUB1P53999 SORD-203ENST00000558580 1395 ntTSL 5 BASIC7.56□□□□□ -1.29e-8■■■■□ 20.2
SUB1P53999 SLC3A2-214ENST00000539507 534 ntTSL 34.82□□□□□ -1.644e-6■■■■□ 20.2
SUB1P53999 FARSA-209ENST00000592662 864 ntTSL 1 (best)14.4□□□□□ -0.16e-8■■■■□ 20.1
SUB1P53999 FARSA-210ENST00000593021 1135 ntTSL 513.94□□□□□ -0.186e-8■■■■□ 20.1
SUB1P53999 FARSA-206ENST00000587981 521 ntTSL 213.23□□□□□ -0.296e-8■■■■□ 20.1
SUB1P53999 FARSA-204ENST00000586280 803 ntTSL 310.45□□□□□ -0.744e-8■■■■□ 20.1
SUB1P53999 RPL24P4-201ENST00000326586 421 ntBASIC5.41□□□□□ -1.541e-6■■■■□ 20.1
SUB1P53999 CNBP-206ENST00000502372 1026 ntTSL 56.83□□□□□ -1.321e-8■■■■□ 20.1
SUB1P53999 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.181e-6■■■■□ 20.1
SUB1P53999 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.26□□□□□ -1.578e-8■■■■□ 20.1
SUB1P53999 UBE2V2-208ENST00000523432 918 ntTSL 26.6□□□□□ -1.356e-7■■■■□ 20.1
SUB1P53999 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.793e-7■■■■□ 20.1
SUB1P53999 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.923e-7■■■■□ 20.1
SUB1P53999 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.963e-7■■■■□ 20.1
SUB1P53999 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.47■□□□□ 0.398e-7■■■■□ 20.1
SUB1P53999 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.278e-7■■■■□ 20.1
SUB1P53999 DCTD-203ENST00000500813 1829 ntTSL 212.98□□□□□ -0.338e-7■■■■□ 20.1
SUB1P53999 DCTD-207ENST00000507543 1874 ntTSL 510.28□□□□□ -0.768e-7■■■■□ 20.1
SUB1P53999 RPL35A-208ENST00000485439 677 ntTSL 25.78□□□□□ -1.489e-9■■■■□ 20.1
SUB1P53999 RPL35A-201ENST00000329092 456 ntTSL 33.87□□□□□ -1.799e-9■■■■□ 20.1
SUB1P53999 RPL35A-204ENST00000442341 517 ntTSL 33.59□□□□□ -1.839e-9■■■■□ 20.1
SUB1P53999 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.61e-7■■■■□ 20.1
SUB1P53999 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.27■□□□□ 0.191e-7■■■■□ 20.1
SUB1P53999 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.081e-7■■■■□ 20.1
SUB1P53999 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.19■□□□□ 0.021e-7■■■■□ 20.1
SUB1P53999 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.011e-7■■■■□ 20.1
SUB1P53999 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.051e-7■■■■□ 20.1
SUB1P53999 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.061e-7■■■■□ 20.1
Retrieved 100 of 11,644 protein–RNA pairs in 159.9 ms