RNA–Protein interactions for RNA: ENST00000307961.10

RPL4-201, Transcript of ribosomal protein L4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL4, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-201ENST00000307961 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
RPL4-201ENST00000307961 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
RPL4-201ENST00000307961 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
RPL4-201ENST00000307961 HRCP23327 699 aa18.19■□□□□ 0.5
RPL4-201ENST00000307961 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
RPL4-201ENST00000307961 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.49
RPL4-201ENST00000307961 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
RPL4-201ENST00000307961 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
RPL4-201ENST00000307961 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
RPL4-201ENST00000307961 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
RPL4-201ENST00000307961 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
RPL4-201ENST00000307961 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
RPL4-201ENST00000307961 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
RPL4-201ENST00000307961 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
RPL4-201ENST00000307961 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
RPL4-201ENST00000307961 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
RPL4-201ENST00000307961 ABCC9O60706 1549 aa17.1■□□□□ 0.33
RPL4-201ENST00000307961 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
RPL4-201ENST00000307961 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.33
RPL4-201ENST00000307961 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
RPL4-201ENST00000307961 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
RPL4-201ENST00000307961 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
RPL4-201ENST00000307961 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
RPL4-201ENST00000307961 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
RPL4-201ENST00000307961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
RPL4-201ENST00000307961 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
RPL4-201ENST00000307961 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
RPL4-201ENST00000307961 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
RPL4-201ENST00000307961 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
RPL4-201ENST00000307961 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
RPL4-201ENST00000307961 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
RPL4-201ENST00000307961 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
RPL4-201ENST00000307961 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
RPL4-201ENST00000307961 WIZO95785 1651 aa16.54■□□□□ 0.24
RPL4-201ENST00000307961 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
RPL4-201ENST00000307961 NACADO15069 1562 aa16.43■□□□□ 0.22
RPL4-201ENST00000307961 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
RPL4-201ENST00000307961 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
RPL4-201ENST00000307961 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
RPL4-201ENST00000307961 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
RPL4-201ENST00000307961 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
RPL4-201ENST00000307961 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
RPL4-201ENST00000307961 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
RPL4-201ENST00000307961 MYT1Q01538 1121 aa16.31■□□□□ 0.2
RPL4-201ENST00000307961 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
RPL4-201ENST00000307961 SOGA1O94964 1423 aa16.31■□□□□ 0.2
RPL4-201ENST00000307961 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
RPL4-201ENST00000307961 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
RPL4-201ENST00000307961 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
RPL4-201ENST00000307961 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
RPL4-201ENST00000307961 MIER1Q8N108 512 aa16.21■□□□□ 0.19
RPL4-201ENST00000307961 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
RPL4-201ENST00000307961 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
RPL4-201ENST00000307961 EEA1Q15075 1411 aa16.18■□□□□ 0.18
RPL4-201ENST00000307961 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
RPL4-201ENST00000307961 GOLGA3Q08378 1498 aa16.13■□□□□ 0.17
RPL4-201ENST00000307961 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
RPL4-201ENST00000307961 CLIP1P30622 1438 aa16■□□□□ 0.15
RPL4-201ENST00000307961 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
RPL4-201ENST00000307961 APLP2Q06481 763 aa15.99■□□□□ 0.15
RPL4-201ENST00000307961 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
RPL4-201ENST00000307961 RANGAP1P46060 587 aaPredicted RBP15.94■□□□□ 0.14
RPL4-201ENST00000307961 KIF21BO75037 1637 aa15.92■□□□□ 0.14
RPL4-201ENST00000307961 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
RPL4-201ENST00000307961 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
RPL4-201ENST00000307961 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
RPL4-201ENST00000307961 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
RPL4-201ENST00000307961 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
RPL4-201ENST00000307961 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
RPL4-201ENST00000307961 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
RPL4-201ENST00000307961 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
RPL4-201ENST00000307961 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
RPL4-201ENST00000307961 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
RPL4-201ENST00000307961 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
RPL4-201ENST00000307961 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
RPL4-201ENST00000307961 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
RPL4-201ENST00000307961 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
RPL4-201ENST00000307961 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
RPL4-201ENST00000307961 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
RPL4-201ENST00000307961 ITGAEP38570 1179 aa15.62■□□□□ 0.09
RPL4-201ENST00000307961 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
RPL4-201ENST00000307961 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
RPL4-201ENST00000307961 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
RPL4-201ENST00000307961 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
RPL4-201ENST00000307961 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
RPL4-201ENST00000307961 CUX2O14529 1486 aa15.57■□□□□ 0.08
RPL4-201ENST00000307961 BCANQ96GW7 911 aa15.56■□□□□ 0.08
RPL4-201ENST00000307961 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.07
RPL4-201ENST00000307961 RAB3GAP2Q9H2M9 1393 aa15.52■□□□□ 0.07
RPL4-201ENST00000307961 FKBP8Q14318 412 aa15.51■□□□□ 0.07
RPL4-201ENST00000307961 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
RPL4-201ENST00000307961 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
RPL4-201ENST00000307961 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
RPL4-201ENST00000307961 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
RPL4-201ENST00000307961 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
RPL4-201ENST00000307961 CUX1P39880 1505 aa15.43■□□□□ 0.06
RPL4-201ENST00000307961 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
RPL4-201ENST00000307961 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
RPL4-201ENST00000307961 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
RPL4-201ENST00000307961 HIRIP3Q9BW71 556 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms