RNA–Protein interactions for RNA: ENST00000377890.6

SLC3A2-203, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-203ENST00000377890 NISCHQ9Y2I1 1504 aa36■■■■□ 3.35
SLC3A2-203ENST00000377890 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
SLC3A2-203ENST00000377890 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
SLC3A2-203ENST00000377890 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
SLC3A2-203ENST00000377890 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
SLC3A2-203ENST00000377890 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
SLC3A2-203ENST00000377890 ABCC9O60706 1549 aa29.2■■■□□ 2.27
SLC3A2-203ENST00000377890 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
SLC3A2-203ENST00000377890 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
SLC3A2-203ENST00000377890 NACADO15069 1562 aa28.85■■■□□ 2.21
SLC3A2-203ENST00000377890 SCRIBQ14160 1630 aa28.81■■■□□ 2.2
SLC3A2-203ENST00000377890 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
SLC3A2-203ENST00000377890 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
SLC3A2-203ENST00000377890 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
SLC3A2-203ENST00000377890 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
SLC3A2-203ENST00000377890 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
SLC3A2-203ENST00000377890 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
SLC3A2-203ENST00000377890 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
SLC3A2-203ENST00000377890 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SLC3A2-203ENST00000377890 WIZO95785 1651 aa27.71■■■□□ 2.03
SLC3A2-203ENST00000377890 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
SLC3A2-203ENST00000377890 SMARCA4P51532 1647 aa27.58■■■□□ 2.01
SLC3A2-203ENST00000377890 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
SLC3A2-203ENST00000377890 TOP2AP11388 1531 aaKnown RBP27.32■■□□□ 1.96
SLC3A2-203ENST00000377890 TRIM41Q8WV44 630 aa27.26■■□□□ 1.96
SLC3A2-203ENST00000377890 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
SLC3A2-203ENST00000377890 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
SLC3A2-203ENST00000377890 SMARCA2P51531 1590 aa27.14■■□□□ 1.94
SLC3A2-203ENST00000377890 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
SLC3A2-203ENST00000377890 HRCP23327 699 aa27.13■■□□□ 1.93
SLC3A2-203ENST00000377890 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
SLC3A2-203ENST00000377890 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
SLC3A2-203ENST00000377890 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
SLC3A2-203ENST00000377890 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
SLC3A2-203ENST00000377890 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
SLC3A2-203ENST00000377890 ABCC8Q09428 1581 aa26.76■■□□□ 1.88
SLC3A2-203ENST00000377890 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
SLC3A2-203ENST00000377890 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
SLC3A2-203ENST00000377890 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
SLC3A2-203ENST00000377890 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
SLC3A2-203ENST00000377890 WRNQ14191 1432 aaPredicted RBP eCLIP26.43■■□□□ 1.82
SLC3A2-203ENST00000377890 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
SLC3A2-203ENST00000377890 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
SLC3A2-203ENST00000377890 SOGA1O94964 1423 aa26.36■■□□□ 1.81
SLC3A2-203ENST00000377890 EEA1Q15075 1411 aa26.31■■□□□ 1.8
SLC3A2-203ENST00000377890 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.8
SLC3A2-203ENST00000377890 CFTRP13569 1480 aa26.24■■□□□ 1.79
SLC3A2-203ENST00000377890 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
SLC3A2-203ENST00000377890 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
SLC3A2-203ENST00000377890 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
SLC3A2-203ENST00000377890 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
SLC3A2-203ENST00000377890 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
SLC3A2-203ENST00000377890 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
SLC3A2-203ENST00000377890 GOLGA3Q08378 1498 aa26.08■■□□□ 1.76
SLC3A2-203ENST00000377890 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
SLC3A2-203ENST00000377890 CUX1P39880 1505 aa26.05■■□□□ 1.76
SLC3A2-203ENST00000377890 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
SLC3A2-203ENST00000377890 KIF21BO75037 1637 aa25.98■■□□□ 1.75
SLC3A2-203ENST00000377890 UBTFP17480 764 aaKnown RBP25.97■■□□□ 1.75
SLC3A2-203ENST00000377890 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.75
SLC3A2-203ENST00000377890 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
SLC3A2-203ENST00000377890 NESP48681 1621 aa25.82■■□□□ 1.72
SLC3A2-203ENST00000377890 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
SLC3A2-203ENST00000377890 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
SLC3A2-203ENST00000377890 CLIP1P30622 1438 aa25.73■■□□□ 1.71
SLC3A2-203ENST00000377890 TTBK1Q5TCY1 1321 aaPredicted RBP25.72■■□□□ 1.71
SLC3A2-203ENST00000377890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.7■■□□□ 1.7
SLC3A2-203ENST00000377890 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
SLC3A2-203ENST00000377890 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
SLC3A2-203ENST00000377890 PRXQ9BXM0 1461 aa25.67■■□□□ 1.7
SLC3A2-203ENST00000377890 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
SLC3A2-203ENST00000377890 CCER1Q8TC90 406 aaPredicted RBP25.63■■□□□ 1.69
SLC3A2-203ENST00000377890 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
SLC3A2-203ENST00000377890 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
SLC3A2-203ENST00000377890 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
SLC3A2-203ENST00000377890 CUX2O14529 1486 aa25.58■■□□□ 1.69
SLC3A2-203ENST00000377890 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
SLC3A2-203ENST00000377890 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
SLC3A2-203ENST00000377890 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
SLC3A2-203ENST00000377890 IGF1RP08069 1367 aa25.49■■□□□ 1.67
SLC3A2-203ENST00000377890 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
SLC3A2-203ENST00000377890 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.66
SLC3A2-203ENST00000377890 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
SLC3A2-203ENST00000377890 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
SLC3A2-203ENST00000377890 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
SLC3A2-203ENST00000377890 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
SLC3A2-203ENST00000377890 APLP2Q06481 763 aa25.35■■□□□ 1.65
SLC3A2-203ENST00000377890 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.64
SLC3A2-203ENST00000377890 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
SLC3A2-203ENST00000377890 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
SLC3A2-203ENST00000377890 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
SLC3A2-203ENST00000377890 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
SLC3A2-203ENST00000377890 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
SLC3A2-203ENST00000377890 TARBP1Q13395 1621 aaKnown RBP25.16■■□□□ 1.62
SLC3A2-203ENST00000377890 CUL7Q14999 1698 aa25.14■■□□□ 1.62
SLC3A2-203ENST00000377890 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
SLC3A2-203ENST00000377890 KANK4Q5T7N3 995 aaPredicted RBP25.11■■□□□ 1.61
SLC3A2-203ENST00000377890 GAPVD1Q14C86 1478 aa25.1■■□□□ 1.61
SLC3A2-203ENST00000377890 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
SLC3A2-203ENST00000377890 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms