RNA–Protein interactions for RNA: ENST00000502372.1

CNBP-206, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 5

Gene CNBP, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-206ENST00000502372 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
CNBP-206ENST00000502372 ABCC9O60706 1549 aa24.63■■□□□ 1.53
CNBP-206ENST00000502372 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
CNBP-206ENST00000502372 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
CNBP-206ENST00000502372 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
CNBP-206ENST00000502372 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
CNBP-206ENST00000502372 NACADO15069 1562 aa22.84■■□□□ 1.25
CNBP-206ENST00000502372 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
CNBP-206ENST00000502372 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
CNBP-206ENST00000502372 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
CNBP-206ENST00000502372 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
CNBP-206ENST00000502372 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
CNBP-206ENST00000502372 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
CNBP-206ENST00000502372 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
CNBP-206ENST00000502372 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
CNBP-206ENST00000502372 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
CNBP-206ENST00000502372 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
CNBP-206ENST00000502372 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
CNBP-206ENST00000502372 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
CNBP-206ENST00000502372 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
CNBP-206ENST00000502372 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
CNBP-206ENST00000502372 CUX2O14529 1486 aa21.52■■□□□ 1.03
CNBP-206ENST00000502372 ERCC6Q03468 1493 aa21.27■■□□□ 1
CNBP-206ENST00000502372 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
CNBP-206ENST00000502372 NESP48681 1621 aa21■□□□□ 0.95
CNBP-206ENST00000502372 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
CNBP-206ENST00000502372 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
CNBP-206ENST00000502372 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
CNBP-206ENST00000502372 HMGXB3Q12766 1538 aa20.89■□□□□ 0.94
CNBP-206ENST00000502372 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
CNBP-206ENST00000502372 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
CNBP-206ENST00000502372 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
CNBP-206ENST00000502372 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
CNBP-206ENST00000502372 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
CNBP-206ENST00000502372 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
CNBP-206ENST00000502372 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
CNBP-206ENST00000502372 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
CNBP-206ENST00000502372 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
CNBP-206ENST00000502372 WDR62O43379 1518 aa20.48■□□□□ 0.87
CNBP-206ENST00000502372 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
CNBP-206ENST00000502372 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
CNBP-206ENST00000502372 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
CNBP-206ENST00000502372 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CNBP-206ENST00000502372 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
CNBP-206ENST00000502372 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
CNBP-206ENST00000502372 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
CNBP-206ENST00000502372 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
CNBP-206ENST00000502372 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
CNBP-206ENST00000502372 CFTRP13569 1480 aa20.1■□□□□ 0.81
CNBP-206ENST00000502372 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
CNBP-206ENST00000502372 WIZO95785 1651 aa20.06■□□□□ 0.8
CNBP-206ENST00000502372 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
CNBP-206ENST00000502372 ZNF608Q9ULD9 1512 aaPredicted RBP19.96■□□□□ 0.79
CNBP-206ENST00000502372 TRHP20396 242 aaPredicted RBP19.93■□□□□ 0.78
CNBP-206ENST00000502372 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
CNBP-206ENST00000502372 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
CNBP-206ENST00000502372 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
CNBP-206ENST00000502372 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
CNBP-206ENST00000502372 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
CNBP-206ENST00000502372 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
CNBP-206ENST00000502372 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
CNBP-206ENST00000502372 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
CNBP-206ENST00000502372 CHD1O14646 1710 aa19.7■□□□□ 0.74
CNBP-206ENST00000502372 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.743e-6■■■□□ 18.6
CNBP-206ENST00000502372 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
CNBP-206ENST00000502372 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
CNBP-206ENST00000502372 FBLN2P98095 1184 aa19.63■□□□□ 0.73
CNBP-206ENST00000502372 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
CNBP-206ENST00000502372 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
CNBP-206ENST00000502372 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
CNBP-206ENST00000502372 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
CNBP-206ENST00000502372 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
CNBP-206ENST00000502372 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
CNBP-206ENST00000502372 SNAPC4Q5SXM2 1469 aa19.44■□□□□ 0.7
CNBP-206ENST00000502372 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
CNBP-206ENST00000502372 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
CNBP-206ENST00000502372 SOGA1O94964 1423 aa19.41■□□□□ 0.7
CNBP-206ENST00000502372 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
CNBP-206ENST00000502372 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
CNBP-206ENST00000502372 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
CNBP-206ENST00000502372 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
CNBP-206ENST00000502372 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
CNBP-206ENST00000502372 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
CNBP-206ENST00000502372 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
CNBP-206ENST00000502372 CUX1P39880 1505 aa19.18■□□□□ 0.66
CNBP-206ENST00000502372 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
CNBP-206ENST00000502372 ILDR1Q86SU0 546 aaPredicted RBP19.1■□□□□ 0.65
CNBP-206ENST00000502372 KIF13AQ9H1H9 1805 aa19.07■□□□□ 0.64
CNBP-206ENST00000502372 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
CNBP-206ENST00000502372 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
CNBP-206ENST00000502372 NUP160Q12769 1436 aa19.06■□□□□ 0.64
CNBP-206ENST00000502372 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
CNBP-206ENST00000502372 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
CNBP-206ENST00000502372 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
CNBP-206ENST00000502372 SHROOM2Q13796 1616 aa19.01■□□□□ 0.63
CNBP-206ENST00000502372 ABCC10Q5T3U5 1492 aa18.96■□□□□ 0.63
CNBP-206ENST00000502372 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
CNBP-206ENST00000502372 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
CNBP-206ENST00000502372 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
CNBP-206ENST00000502372 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms