RNA–Protein interactions for RNA: ENST00000297338.6

RAD21-201, Transcript of RAD21 cohesin complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD21, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21-201ENST00000297338 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
RAD21-201ENST00000297338 HRCP23327 699 aa15.86■□□□□ 0.13
RAD21-201ENST00000297338 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
RAD21-201ENST00000297338 PCGF6Q9BYE7 350 aa15.55■□□□□ 0.08
RAD21-201ENST00000297338 PPARGC1BQ86YN6 1023 aaKnown RBP15.5■□□□□ 0.07
RAD21-201ENST00000297338 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
RAD21-201ENST00000297338 MYT1Q01538 1121 aa15.34■□□□□ 0.05
RAD21-201ENST00000297338 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
RAD21-201ENST00000297338 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
RAD21-201ENST00000297338 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
RAD21-201ENST00000297338 ZEB1P37275 1124 aaPredicted RBP15.02□□□□□ -0.01
RAD21-201ENST00000297338 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
RAD21-201ENST00000297338 TRIM26Q12899 539 aaPredicted RBP14.96□□□□□ -0.01
RAD21-201ENST00000297338 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
RAD21-201ENST00000297338 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
RAD21-201ENST00000297338 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
RAD21-201ENST00000297338 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
RAD21-201ENST00000297338 ABCC9O60706 1549 aa14.76□□□□□ -0.05
RAD21-201ENST00000297338 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
RAD21-201ENST00000297338 ACIN1Q9UKV3 1341 aaKnown RBP14.74□□□□□ -0.05
RAD21-201ENST00000297338 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
RAD21-201ENST00000297338 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
RAD21-201ENST00000297338 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
RAD21-201ENST00000297338 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
RAD21-201ENST00000297338 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
RAD21-201ENST00000297338 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
RAD21-201ENST00000297338 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.11
RAD21-201ENST00000297338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
RAD21-201ENST00000297338 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
RAD21-201ENST00000297338 FAM9AQ8IZU1 332 aaPredicted RBP14.3□□□□□ -0.12
RAD21-201ENST00000297338 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
RAD21-201ENST00000297338 BCL11AQ9H165 835 aa14.13□□□□□ -0.15
RAD21-201ENST00000297338 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
RAD21-201ENST00000297338 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
RAD21-201ENST00000297338 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
RAD21-201ENST00000297338 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
RAD21-201ENST00000297338 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
RAD21-201ENST00000297338 MIER1Q8N108 512 aa13.97□□□□□ -0.17
RAD21-201ENST00000297338 NACADO15069 1562 aa13.97□□□□□ -0.17
RAD21-201ENST00000297338 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAD21-201ENST00000297338 CLSPNQ9HAW4 1339 aa13.93□□□□□ -0.18
RAD21-201ENST00000297338 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
RAD21-201ENST00000297338 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
RAD21-201ENST00000297338 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
RAD21-201ENST00000297338 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
RAD21-201ENST00000297338 BCANQ96GW7 911 aa13.69□□□□□ -0.22
RAD21-201ENST00000297338 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
RAD21-201ENST00000297338 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
RAD21-201ENST00000297338 NEFLP07196 543 aa13.64□□□□□ -0.23
RAD21-201ENST00000297338 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
RAD21-201ENST00000297338 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
RAD21-201ENST00000297338 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
RAD21-201ENST00000297338 FKBP8Q14318 412 aa13.56□□□□□ -0.24
RAD21-201ENST00000297338 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
RAD21-201ENST00000297338 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
RAD21-201ENST00000297338 APLP2Q06481 763 aa13.53□□□□□ -0.24
RAD21-201ENST00000297338 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
RAD21-201ENST00000297338 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
RAD21-201ENST00000297338 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
RAD21-201ENST00000297338 MYT1LQ9UL68 1186 aa13.44□□□□□ -0.26
RAD21-201ENST00000297338 ITGAEP38570 1179 aa13.42□□□□□ -0.26
RAD21-201ENST00000297338 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
RAD21-201ENST00000297338 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
RAD21-201ENST00000297338 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
RAD21-201ENST00000297338 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
RAD21-201ENST00000297338 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
RAD21-201ENST00000297338 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
RAD21-201ENST00000297338 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
RAD21-201ENST00000297338 MSH5O43196 834 aa13.3□□□□□ -0.28
RAD21-201ENST00000297338 WIZO95785 1651 aa13.29□□□□□ -0.28
RAD21-201ENST00000297338 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.28
RAD21-201ENST00000297338 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.28
RAD21-201ENST00000297338 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
RAD21-201ENST00000297338 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
RAD21-201ENST00000297338 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
RAD21-201ENST00000297338 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
RAD21-201ENST00000297338 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
RAD21-201ENST00000297338 ANP32CO43423 234 aa13.2□□□□□ -0.3
RAD21-201ENST00000297338 NBR1Q14596 966 aa13.2□□□□□ -0.3
RAD21-201ENST00000297338 SOGA1O94964 1423 aa13.18□□□□□ -0.3
RAD21-201ENST00000297338 EEA1Q15075 1411 aa13.18□□□□□ -0.3
RAD21-201ENST00000297338 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
RAD21-201ENST00000297338 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
RAD21-201ENST00000297338 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
RAD21-201ENST00000297338 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
RAD21-201ENST00000297338 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
RAD21-201ENST00000297338 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
RAD21-201ENST00000297338 CLIP1P30622 1438 aa13.14□□□□□ -0.31
RAD21-201ENST00000297338 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
RAD21-201ENST00000297338 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
RAD21-201ENST00000297338 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
RAD21-201ENST00000297338 CCER2I3L3R5 266 aa13.09□□□□□ -0.31
RAD21-201ENST00000297338 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAD21-201ENST00000297338 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
RAD21-201ENST00000297338 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
RAD21-201ENST00000297338 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
RAD21-201ENST00000297338 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
RAD21-201ENST00000297338 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
RAD21-201ENST00000297338 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
RAD21-201ENST00000297338 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms