RNA–Protein interactions for RNA: ENST00000377891.6

SLC3A2-204, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2 BASIC

Gene SLC3A2, Length 2,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-204ENST00000377891 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
SLC3A2-204ENST00000377891 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
SLC3A2-204ENST00000377891 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
SLC3A2-204ENST00000377891 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
SLC3A2-204ENST00000377891 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
SLC3A2-204ENST00000377891 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
SLC3A2-204ENST00000377891 ABCC9O60706 1549 aa28.91■■■□□ 2.22
SLC3A2-204ENST00000377891 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
SLC3A2-204ENST00000377891 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SLC3A2-204ENST00000377891 NACADO15069 1562 aa28.39■■■□□ 2.13
SLC3A2-204ENST00000377891 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
SLC3A2-204ENST00000377891 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
SLC3A2-204ENST00000377891 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
SLC3A2-204ENST00000377891 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
SLC3A2-204ENST00000377891 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
SLC3A2-204ENST00000377891 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
SLC3A2-204ENST00000377891 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.97
SLC3A2-204ENST00000377891 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
SLC3A2-204ENST00000377891 WIZO95785 1651 aa27.21■■□□□ 1.95
SLC3A2-204ENST00000377891 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
SLC3A2-204ENST00000377891 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
SLC3A2-204ENST00000377891 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
SLC3A2-204ENST00000377891 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
SLC3A2-204ENST00000377891 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
SLC3A2-204ENST00000377891 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
SLC3A2-204ENST00000377891 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
SLC3A2-204ENST00000377891 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
SLC3A2-204ENST00000377891 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
SLC3A2-204ENST00000377891 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
SLC3A2-204ENST00000377891 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
SLC3A2-204ENST00000377891 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
SLC3A2-204ENST00000377891 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
SLC3A2-204ENST00000377891 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
SLC3A2-204ENST00000377891 LOC105371045A0A1W2PR82 267 aa26.2■■□□□ 1.79
SLC3A2-204ENST00000377891 HRCP23327 699 aa26.16■■□□□ 1.78
SLC3A2-204ENST00000377891 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.77
SLC3A2-204ENST00000377891 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
SLC3A2-204ENST00000377891 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
SLC3A2-204ENST00000377891 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
SLC3A2-204ENST00000377891 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
SLC3A2-204ENST00000377891 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
SLC3A2-204ENST00000377891 SOGA1O94964 1423 aa25.79■■□□□ 1.72
SLC3A2-204ENST00000377891 CFTRP13569 1480 aa25.77■■□□□ 1.72
SLC3A2-204ENST00000377891 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
SLC3A2-204ENST00000377891 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
SLC3A2-204ENST00000377891 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
SLC3A2-204ENST00000377891 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
SLC3A2-204ENST00000377891 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
SLC3A2-204ENST00000377891 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
SLC3A2-204ENST00000377891 CUX1P39880 1505 aa25.58■■□□□ 1.69
SLC3A2-204ENST00000377891 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
SLC3A2-204ENST00000377891 EEA1Q15075 1411 aa25.53■■□□□ 1.68
SLC3A2-204ENST00000377891 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
SLC3A2-204ENST00000377891 NESP48681 1621 aa25.5■■□□□ 1.67
SLC3A2-204ENST00000377891 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
SLC3A2-204ENST00000377891 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SLC3A2-204ENST00000377891 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
SLC3A2-204ENST00000377891 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
SLC3A2-204ENST00000377891 KIF21BO75037 1637 aa25.29■■□□□ 1.64
SLC3A2-204ENST00000377891 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SLC3A2-204ENST00000377891 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
SLC3A2-204ENST00000377891 CEP162Q5TB80 1403 aa25.26■■□□□ 1.63
SLC3A2-204ENST00000377891 TNIKQ9UKE5 1360 aa25.26■■□□□ 1.63
SLC3A2-204ENST00000377891 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
SLC3A2-204ENST00000377891 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
SLC3A2-204ENST00000377891 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
SLC3A2-204ENST00000377891 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
SLC3A2-204ENST00000377891 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
SLC3A2-204ENST00000377891 CUX2O14529 1486 aa25.14■■□□□ 1.62
SLC3A2-204ENST00000377891 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
SLC3A2-204ENST00000377891 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
SLC3A2-204ENST00000377891 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
SLC3A2-204ENST00000377891 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
SLC3A2-204ENST00000377891 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.61
SLC3A2-204ENST00000377891 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
SLC3A2-204ENST00000377891 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
SLC3A2-204ENST00000377891 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
SLC3A2-204ENST00000377891 ZEB1P37275 1124 aaPredicted RBP24.98■■□□□ 1.59
SLC3A2-204ENST00000377891 CLIP1P30622 1438 aa24.97■■□□□ 1.59
SLC3A2-204ENST00000377891 IGF1RP08069 1367 aa24.97■■□□□ 1.59
SLC3A2-204ENST00000377891 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
SLC3A2-204ENST00000377891 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
SLC3A2-204ENST00000377891 TTBK1Q5TCY1 1321 aaPredicted RBP24.85■■□□□ 1.57
SLC3A2-204ENST00000377891 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
SLC3A2-204ENST00000377891 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
SLC3A2-204ENST00000377891 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
SLC3A2-204ENST00000377891 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
SLC3A2-204ENST00000377891 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
SLC3A2-204ENST00000377891 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
SLC3A2-204ENST00000377891 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
SLC3A2-204ENST00000377891 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
SLC3A2-204ENST00000377891 CUL7Q14999 1698 aa24.69■■□□□ 1.54
SLC3A2-204ENST00000377891 ERCC6Q03468 1493 aa24.68■■□□□ 1.54
SLC3A2-204ENST00000377891 WDR62O43379 1518 aa24.66■■□□□ 1.54
SLC3A2-204ENST00000377891 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
SLC3A2-204ENST00000377891 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.532e-7■■■■■ 28.2
SLC3A2-204ENST00000377891 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
SLC3A2-204ENST00000377891 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
SLC3A2-204ENST00000377891 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
SLC3A2-204ENST00000377891 CTTNBP2Q8WZ74 1663 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms