RNA–Protein interactions for RNA: ENST00000561775.5

RPL4-203, Transcript of ribosomal protein L4, humanhuman

TSL 5

Gene RPL4, Length 1,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-203ENST00000561775 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
RPL4-203ENST00000561775 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
RPL4-203ENST00000561775 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
RPL4-203ENST00000561775 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
RPL4-203ENST00000561775 FOXD1Q16676 465 aa18.45■□□□□ 0.54
RPL4-203ENST00000561775 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
RPL4-203ENST00000561775 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
RPL4-203ENST00000561775 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
RPL4-203ENST00000561775 ADRA2BP18089 450 aa17.54■□□□□ 0.4
RPL4-203ENST00000561775 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
RPL4-203ENST00000561775 MSH5O43196 834 aa17.09■□□□□ 0.33
RPL4-203ENST00000561775 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
RPL4-203ENST00000561775 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.15
RPL4-203ENST00000561775 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
RPL4-203ENST00000561775 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
RPL4-203ENST00000561775 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
RPL4-203ENST00000561775 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
RPL4-203ENST00000561775 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
RPL4-203ENST00000561775 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
RPL4-203ENST00000561775 KCNA4P22459 653 aa15.42■□□□□ 0.06
RPL4-203ENST00000561775 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
RPL4-203ENST00000561775 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
RPL4-203ENST00000561775 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
RPL4-203ENST00000561775 ABCC9O60706 1549 aa15.29■□□□□ 0.04
RPL4-203ENST00000561775 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
RPL4-203ENST00000561775 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
RPL4-203ENST00000561775 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
RPL4-203ENST00000561775 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
RPL4-203ENST00000561775 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
RPL4-203ENST00000561775 NACADO15069 1562 aa14.89□□□□□ -0.03
RPL4-203ENST00000561775 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
RPL4-203ENST00000561775 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
RPL4-203ENST00000561775 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
RPL4-203ENST00000561775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.071e-23■■□□□ 12.3
RPL4-203ENST00000561775 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
RPL4-203ENST00000561775 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
RPL4-203ENST00000561775 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
RPL4-203ENST00000561775 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
RPL4-203ENST00000561775 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
RPL4-203ENST00000561775 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
RPL4-203ENST00000561775 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
RPL4-203ENST00000561775 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
RPL4-203ENST00000561775 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
RPL4-203ENST00000561775 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
RPL4-203ENST00000561775 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
RPL4-203ENST00000561775 ZBTB22O15209 634 aa14.21□□□□□ -0.14
RPL4-203ENST00000561775 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
RPL4-203ENST00000561775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
RPL4-203ENST00000561775 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
RPL4-203ENST00000561775 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
RPL4-203ENST00000561775 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
RPL4-203ENST00000561775 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
RPL4-203ENST00000561775 APLP2Q06481 763 aa14□□□□□ -0.17
RPL4-203ENST00000561775 CAPN15O75808 1086 aa13.99□□□□□ -0.17
RPL4-203ENST00000561775 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
RPL4-203ENST00000561775 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
RPL4-203ENST00000561775 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
RPL4-203ENST00000561775 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
RPL4-203ENST00000561775 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
RPL4-203ENST00000561775 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
RPL4-203ENST00000561775 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
RPL4-203ENST00000561775 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
RPL4-203ENST00000561775 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
RPL4-203ENST00000561775 DSG3P32926 999 aa13.85□□□□□ -0.19
RPL4-203ENST00000561775 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.19
RPL4-203ENST00000561775 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
RPL4-203ENST00000561775 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
RPL4-203ENST00000561775 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
RPL4-203ENST00000561775 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
RPL4-203ENST00000561775 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
RPL4-203ENST00000561775 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.21
RPL4-203ENST00000561775 WIZO95785 1651 aa13.75□□□□□ -0.21
RPL4-203ENST00000561775 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
RPL4-203ENST00000561775 ABCB7O75027 752 aa13.72□□□□□ -0.21
RPL4-203ENST00000561775 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
RPL4-203ENST00000561775 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
RPL4-203ENST00000561775 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
RPL4-203ENST00000561775 POLA2Q14181 598 aa13.61□□□□□ -0.23
RPL4-203ENST00000561775 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
RPL4-203ENST00000561775 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
RPL4-203ENST00000561775 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
RPL4-203ENST00000561775 CFTRP13569 1480 aa13.34□□□□□ -0.27
RPL4-203ENST00000561775 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
RPL4-203ENST00000561775 NESP48681 1621 aa13.29□□□□□ -0.28
RPL4-203ENST00000561775 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
RPL4-203ENST00000561775 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
RPL4-203ENST00000561775 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.29
RPL4-203ENST00000561775 FBLN2P98095 1184 aa13.2□□□□□ -0.3
RPL4-203ENST00000561775 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
RPL4-203ENST00000561775 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
RPL4-203ENST00000561775 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
RPL4-203ENST00000561775 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
RPL4-203ENST00000561775 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
RPL4-203ENST00000561775 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
RPL4-203ENST00000561775 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
RPL4-203ENST00000561775 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
RPL4-203ENST00000561775 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
RPL4-203ENST00000561775 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
RPL4-203ENST00000561775 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
RPL4-203ENST00000561775 CUX1P39880 1505 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms