RNA–Protein interactions for RNA: ENST00000535768.1

SLC3A2-207, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 597 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-207ENST00000535768 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
SLC3A2-207ENST00000535768 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
SLC3A2-207ENST00000535768 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
SLC3A2-207ENST00000535768 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
SLC3A2-207ENST00000535768 ABCC9O60706 1549 aa19.69■□□□□ 0.74
SLC3A2-207ENST00000535768 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
SLC3A2-207ENST00000535768 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
SLC3A2-207ENST00000535768 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
SLC3A2-207ENST00000535768 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
SLC3A2-207ENST00000535768 NACADO15069 1562 aa19.32■□□□□ 0.68
SLC3A2-207ENST00000535768 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
SLC3A2-207ENST00000535768 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
SLC3A2-207ENST00000535768 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
SLC3A2-207ENST00000535768 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
SLC3A2-207ENST00000535768 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
SLC3A2-207ENST00000535768 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
SLC3A2-207ENST00000535768 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
SLC3A2-207ENST00000535768 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
SLC3A2-207ENST00000535768 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
SLC3A2-207ENST00000535768 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SLC3A2-207ENST00000535768 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
SLC3A2-207ENST00000535768 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
SLC3A2-207ENST00000535768 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
SLC3A2-207ENST00000535768 FOXD1Q16676 465 aa17.97■□□□□ 0.47
SLC3A2-207ENST00000535768 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
SLC3A2-207ENST00000535768 MROH2BQ7Z745 1585 aa17.95■□□□□ 0.46
SLC3A2-207ENST00000535768 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
SLC3A2-207ENST00000535768 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
SLC3A2-207ENST00000535768 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
SLC3A2-207ENST00000535768 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
SLC3A2-207ENST00000535768 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
SLC3A2-207ENST00000535768 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
SLC3A2-207ENST00000535768 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
SLC3A2-207ENST00000535768 WIZO95785 1651 aa17.77■□□□□ 0.44
SLC3A2-207ENST00000535768 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
SLC3A2-207ENST00000535768 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
SLC3A2-207ENST00000535768 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
SLC3A2-207ENST00000535768 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
SLC3A2-207ENST00000535768 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
SLC3A2-207ENST00000535768 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
SLC3A2-207ENST00000535768 ADRA2BP18089 450 aa17.29■□□□□ 0.36
SLC3A2-207ENST00000535768 CFTRP13569 1480 aa17.27■□□□□ 0.36
SLC3A2-207ENST00000535768 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
SLC3A2-207ENST00000535768 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
SLC3A2-207ENST00000535768 NESP48681 1621 aa17.17■□□□□ 0.34
SLC3A2-207ENST00000535768 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
SLC3A2-207ENST00000535768 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
SLC3A2-207ENST00000535768 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
SLC3A2-207ENST00000535768 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
SLC3A2-207ENST00000535768 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
SLC3A2-207ENST00000535768 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
SLC3A2-207ENST00000535768 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
SLC3A2-207ENST00000535768 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
SLC3A2-207ENST00000535768 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
SLC3A2-207ENST00000535768 WDR62O43379 1518 aa16.89■□□□□ 0.29
SLC3A2-207ENST00000535768 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
SLC3A2-207ENST00000535768 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
SLC3A2-207ENST00000535768 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
SLC3A2-207ENST00000535768 CUX1P39880 1505 aa16.83■□□□□ 0.28
SLC3A2-207ENST00000535768 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
SLC3A2-207ENST00000535768 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
SLC3A2-207ENST00000535768 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
SLC3A2-207ENST00000535768 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
SLC3A2-207ENST00000535768 CUX2O14529 1486 aa16.76■□□□□ 0.27
SLC3A2-207ENST00000535768 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
SLC3A2-207ENST00000535768 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
SLC3A2-207ENST00000535768 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
SLC3A2-207ENST00000535768 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
SLC3A2-207ENST00000535768 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
SLC3A2-207ENST00000535768 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
SLC3A2-207ENST00000535768 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
SLC3A2-207ENST00000535768 SOGA1O94964 1423 aa16.6■□□□□ 0.25
SLC3A2-207ENST00000535768 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
SLC3A2-207ENST00000535768 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SLC3A2-207ENST00000535768 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
SLC3A2-207ENST00000535768 MSH5O43196 834 aa16.49■□□□□ 0.23
SLC3A2-207ENST00000535768 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-207ENST00000535768 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
SLC3A2-207ENST00000535768 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
SLC3A2-207ENST00000535768 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
SLC3A2-207ENST00000535768 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
SLC3A2-207ENST00000535768 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
SLC3A2-207ENST00000535768 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
SLC3A2-207ENST00000535768 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.222e-12■■■■□ 23.7
SLC3A2-207ENST00000535768 EEA1Q15075 1411 aa16.41■□□□□ 0.22
SLC3A2-207ENST00000535768 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
SLC3A2-207ENST00000535768 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
SLC3A2-207ENST00000535768 IGF1RP08069 1367 aa16.36■□□□□ 0.21
SLC3A2-207ENST00000535768 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SLC3A2-207ENST00000535768 CUL7Q14999 1698 aa16.34■□□□□ 0.21
SLC3A2-207ENST00000535768 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
SLC3A2-207ENST00000535768 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
SLC3A2-207ENST00000535768 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
SLC3A2-207ENST00000535768 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
SLC3A2-207ENST00000535768 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
SLC3A2-207ENST00000535768 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
SLC3A2-207ENST00000535768 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
SLC3A2-207ENST00000535768 KIF21BO75037 1637 aa16.23■□□□□ 0.19
SLC3A2-207ENST00000535768 CHD1O14646 1710 aa16.22■□□□□ 0.19
SLC3A2-207ENST00000535768 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms