RNA–Protein interactions for RNA: ENST00000568588.5

RPL4-215, Transcript of ribosomal protein L4, humanhuman

TSL 2 BASIC

Gene RPL4, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-215ENST00000568588 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
RPL4-215ENST00000568588 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
RPL4-215ENST00000568588 ABCC9O60706 1549 aa22.78■■□□□ 1.24
RPL4-215ENST00000568588 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
RPL4-215ENST00000568588 NACADO15069 1562 aa22.12■■□□□ 1.13
RPL4-215ENST00000568588 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
RPL4-215ENST00000568588 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
RPL4-215ENST00000568588 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
RPL4-215ENST00000568588 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
RPL4-215ENST00000568588 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
RPL4-215ENST00000568588 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
RPL4-215ENST00000568588 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
RPL4-215ENST00000568588 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
RPL4-215ENST00000568588 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
RPL4-215ENST00000568588 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
RPL4-215ENST00000568588 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
RPL4-215ENST00000568588 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
RPL4-215ENST00000568588 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
RPL4-215ENST00000568588 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
RPL4-215ENST00000568588 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
RPL4-215ENST00000568588 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
RPL4-215ENST00000568588 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
RPL4-215ENST00000568588 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
RPL4-215ENST00000568588 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
RPL4-215ENST00000568588 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
RPL4-215ENST00000568588 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
RPL4-215ENST00000568588 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
RPL4-215ENST00000568588 WIZO95785 1651 aa20.3■□□□□ 0.84
RPL4-215ENST00000568588 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
RPL4-215ENST00000568588 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.82
RPL4-215ENST00000568588 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
RPL4-215ENST00000568588 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
RPL4-215ENST00000568588 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
RPL4-215ENST00000568588 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
RPL4-215ENST00000568588 NESP48681 1621 aa19.78■□□□□ 0.76
RPL4-215ENST00000568588 CFTRP13569 1480 aa19.77■□□□□ 0.76
RPL4-215ENST00000568588 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
RPL4-215ENST00000568588 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
RPL4-215ENST00000568588 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
RPL4-215ENST00000568588 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.72
RPL4-215ENST00000568588 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
RPL4-215ENST00000568588 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
RPL4-215ENST00000568588 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
RPL4-215ENST00000568588 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
RPL4-215ENST00000568588 WDR62O43379 1518 aa19.39■□□□□ 0.69
RPL4-215ENST00000568588 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
RPL4-215ENST00000568588 CUX2O14529 1486 aa19.35■□□□□ 0.69
RPL4-215ENST00000568588 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
RPL4-215ENST00000568588 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
RPL4-215ENST00000568588 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
RPL4-215ENST00000568588 CUX1P39880 1505 aa19.24■□□□□ 0.67
RPL4-215ENST00000568588 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
RPL4-215ENST00000568588 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
RPL4-215ENST00000568588 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
RPL4-215ENST00000568588 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
RPL4-215ENST00000568588 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
RPL4-215ENST00000568588 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
RPL4-215ENST00000568588 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
RPL4-215ENST00000568588 SOGA1O94964 1423 aa19.07■□□□□ 0.64
RPL4-215ENST00000568588 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
RPL4-215ENST00000568588 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
RPL4-215ENST00000568588 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
RPL4-215ENST00000568588 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
RPL4-215ENST00000568588 WDR97A6NE52 1622 aa18.97■□□□□ 0.63
RPL4-215ENST00000568588 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
RPL4-215ENST00000568588 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
RPL4-215ENST00000568588 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
RPL4-215ENST00000568588 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.621e-11■■■■■ 78.3
RPL4-215ENST00000568588 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
RPL4-215ENST00000568588 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
RPL4-215ENST00000568588 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
RPL4-215ENST00000568588 GRIN2BQ13224 1484 aa18.83■□□□□ 0.61
RPL4-215ENST00000568588 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
RPL4-215ENST00000568588 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
RPL4-215ENST00000568588 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
RPL4-215ENST00000568588 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
RPL4-215ENST00000568588 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
RPL4-215ENST00000568588 IGF1RP08069 1367 aa18.71■□□□□ 0.59
RPL4-215ENST00000568588 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
RPL4-215ENST00000568588 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
RPL4-215ENST00000568588 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
RPL4-215ENST00000568588 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
RPL4-215ENST00000568588 EEA1Q15075 1411 aa18.66■□□□□ 0.58
RPL4-215ENST00000568588 CUL7Q14999 1698 aa18.64■□□□□ 0.57
RPL4-215ENST00000568588 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
RPL4-215ENST00000568588 CHD1O14646 1710 aa18.61■□□□□ 0.57
RPL4-215ENST00000568588 FBLN2P98095 1184 aa18.6■□□□□ 0.57
RPL4-215ENST00000568588 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
RPL4-215ENST00000568588 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
RPL4-215ENST00000568588 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
RPL4-215ENST00000568588 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
RPL4-215ENST00000568588 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
RPL4-215ENST00000568588 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
RPL4-215ENST00000568588 NUP160Q12769 1436 aa18.51■□□□□ 0.55
RPL4-215ENST00000568588 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
RPL4-215ENST00000568588 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
RPL4-215ENST00000568588 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
RPL4-215ENST00000568588 KIF21BO75037 1637 aa18.42■□□□□ 0.54
RPL4-215ENST00000568588 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
RPL4-215ENST00000568588 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms