RNA–Protein interactions for RNA: ENST00000534599.5

RPL27A-212, Transcript of ribosomal protein L27a, humanhuman

TSL 5

Gene RPL27A, Length 651 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-212ENST00000534599 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
RPL27A-212ENST00000534599 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
RPL27A-212ENST00000534599 ABCC9O60706 1549 aa27.89■■■□□ 2.06
RPL27A-212ENST00000534599 NACADO15069 1562 aa26.87■■□□□ 1.89
RPL27A-212ENST00000534599 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
RPL27A-212ENST00000534599 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
RPL27A-212ENST00000534599 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
RPL27A-212ENST00000534599 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
RPL27A-212ENST00000534599 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
RPL27A-212ENST00000534599 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
RPL27A-212ENST00000534599 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
RPL27A-212ENST00000534599 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
RPL27A-212ENST00000534599 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
RPL27A-212ENST00000534599 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.73
RPL27A-212ENST00000534599 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
RPL27A-212ENST00000534599 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
RPL27A-212ENST00000534599 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
RPL27A-212ENST00000534599 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
RPL27A-212ENST00000534599 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
RPL27A-212ENST00000534599 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
RPL27A-212ENST00000534599 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
RPL27A-212ENST00000534599 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
RPL27A-212ENST00000534599 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
RPL27A-212ENST00000534599 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
RPL27A-212ENST00000534599 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
RPL27A-212ENST00000534599 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
RPL27A-212ENST00000534599 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
RPL27A-212ENST00000534599 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
RPL27A-212ENST00000534599 WIZO95785 1651 aa24.43■■□□□ 1.5
RPL27A-212ENST00000534599 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
RPL27A-212ENST00000534599 NESP48681 1621 aa24.15■■□□□ 1.46
RPL27A-212ENST00000534599 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
RPL27A-212ENST00000534599 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
RPL27A-212ENST00000534599 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
RPL27A-212ENST00000534599 CFTRP13569 1480 aa23.94■■□□□ 1.42
RPL27A-212ENST00000534599 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
RPL27A-212ENST00000534599 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
RPL27A-212ENST00000534599 CUX2O14529 1486 aa23.87■■□□□ 1.41
RPL27A-212ENST00000534599 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
RPL27A-212ENST00000534599 KIF21AQ7Z4S6 1674 aa23.84■■□□□ 1.41
RPL27A-212ENST00000534599 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
RPL27A-212ENST00000534599 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
RPL27A-212ENST00000534599 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
RPL27A-212ENST00000534599 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
RPL27A-212ENST00000534599 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
RPL27A-212ENST00000534599 WDR62O43379 1518 aa23.67■■□□□ 1.38
RPL27A-212ENST00000534599 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
RPL27A-212ENST00000534599 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
RPL27A-212ENST00000534599 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
RPL27A-212ENST00000534599 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
RPL27A-212ENST00000534599 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RPL27A-212ENST00000534599 CUX1P39880 1505 aa23.22■■□□□ 1.31
RPL27A-212ENST00000534599 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
RPL27A-212ENST00000534599 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
RPL27A-212ENST00000534599 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
RPL27A-212ENST00000534599 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
RPL27A-212ENST00000534599 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
RPL27A-212ENST00000534599 SOGA1O94964 1423 aa23.07■■□□□ 1.28
RPL27A-212ENST00000534599 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
RPL27A-212ENST00000534599 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
RPL27A-212ENST00000534599 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
RPL27A-212ENST00000534599 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
RPL27A-212ENST00000534599 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
RPL27A-212ENST00000534599 WDR97A6NE52 1622 aa23■■□□□ 1.27
RPL27A-212ENST00000534599 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
RPL27A-212ENST00000534599 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.271e-7■■■■□ 22.9
RPL27A-212ENST00000534599 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
RPL27A-212ENST00000534599 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
RPL27A-212ENST00000534599 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
RPL27A-212ENST00000534599 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
RPL27A-212ENST00000534599 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
RPL27A-212ENST00000534599 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
RPL27A-212ENST00000534599 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
RPL27A-212ENST00000534599 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
RPL27A-212ENST00000534599 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
RPL27A-212ENST00000534599 CHD1O14646 1710 aa22.7■■□□□ 1.22
RPL27A-212ENST00000534599 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
RPL27A-212ENST00000534599 ERICH3Q5RHP9 1530 aa22.66■■□□□ 1.22
RPL27A-212ENST00000534599 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
RPL27A-212ENST00000534599 FBLN2P98095 1184 aa22.6■■□□□ 1.21
RPL27A-212ENST00000534599 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
RPL27A-212ENST00000534599 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
RPL27A-212ENST00000534599 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
RPL27A-212ENST00000534599 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
RPL27A-212ENST00000534599 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
RPL27A-212ENST00000534599 IGF1RP08069 1367 aa22.49■■□□□ 1.19
RPL27A-212ENST00000534599 NUP160Q12769 1436 aa22.48■■□□□ 1.19
RPL27A-212ENST00000534599 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
RPL27A-212ENST00000534599 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
RPL27A-212ENST00000534599 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
RPL27A-212ENST00000534599 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
RPL27A-212ENST00000534599 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
RPL27A-212ENST00000534599 CUL7Q14999 1698 aa22.42■■□□□ 1.18
RPL27A-212ENST00000534599 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
RPL27A-212ENST00000534599 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
RPL27A-212ENST00000534599 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
RPL27A-212ENST00000534599 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
RPL27A-212ENST00000534599 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
RPL27A-212ENST00000534599 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
RPL27A-212ENST00000534599 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms