RNA–Protein interactions for RNA: ENST00000539507.1

SLC3A2-214, Transcript of solute carrier family 3 member 2, humanhuman

TSL 3

Gene SLC3A2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-214ENST00000539507 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
SLC3A2-214ENST00000539507 ABCC9O60706 1549 aa15.47■□□□□ 0.07
SLC3A2-214ENST00000539507 CCDC180Q9P1Z9 1646 aa15.26■□□□□ 0.03
SLC3A2-214ENST00000539507 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
SLC3A2-214ENST00000539507 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
SLC3A2-214ENST00000539507 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
SLC3A2-214ENST00000539507 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
SLC3A2-214ENST00000539507 NACADO15069 1562 aa14.51□□□□□ -0.09
SLC3A2-214ENST00000539507 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
SLC3A2-214ENST00000539507 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
SLC3A2-214ENST00000539507 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
SLC3A2-214ENST00000539507 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
SLC3A2-214ENST00000539507 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
SLC3A2-214ENST00000539507 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
SLC3A2-214ENST00000539507 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
SLC3A2-214ENST00000539507 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
SLC3A2-214ENST00000539507 CECR2Q9BXF3 1484 aa13.98□□□□□ -0.17
SLC3A2-214ENST00000539507 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
SLC3A2-214ENST00000539507 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
SLC3A2-214ENST00000539507 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
SLC3A2-214ENST00000539507 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
SLC3A2-214ENST00000539507 CUX2O14529 1486 aa13.45□□□□□ -0.26
SLC3A2-214ENST00000539507 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
SLC3A2-214ENST00000539507 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
SLC3A2-214ENST00000539507 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
SLC3A2-214ENST00000539507 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
SLC3A2-214ENST00000539507 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
SLC3A2-214ENST00000539507 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
SLC3A2-214ENST00000539507 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.3
SLC3A2-214ENST00000539507 NESP48681 1621 aa13.21□□□□□ -0.3
SLC3A2-214ENST00000539507 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
SLC3A2-214ENST00000539507 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
SLC3A2-214ENST00000539507 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
SLC3A2-214ENST00000539507 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
SLC3A2-214ENST00000539507 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
SLC3A2-214ENST00000539507 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
SLC3A2-214ENST00000539507 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
SLC3A2-214ENST00000539507 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
SLC3A2-214ENST00000539507 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
SLC3A2-214ENST00000539507 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
SLC3A2-214ENST00000539507 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
SLC3A2-214ENST00000539507 WDR62O43379 1518 aa12.93□□□□□ -0.34
SLC3A2-214ENST00000539507 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
SLC3A2-214ENST00000539507 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
SLC3A2-214ENST00000539507 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
SLC3A2-214ENST00000539507 WIZO95785 1651 aa12.83□□□□□ -0.36
SLC3A2-214ENST00000539507 CFTRP13569 1480 aa12.81□□□□□ -0.36
SLC3A2-214ENST00000539507 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
SLC3A2-214ENST00000539507 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
SLC3A2-214ENST00000539507 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
SLC3A2-214ENST00000539507 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
SLC3A2-214ENST00000539507 IFT140Q96RY7 1462 aa12.64□□□□□ -0.39
SLC3A2-214ENST00000539507 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
SLC3A2-214ENST00000539507 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
SLC3A2-214ENST00000539507 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
SLC3A2-214ENST00000539507 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
SLC3A2-214ENST00000539507 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
SLC3A2-214ENST00000539507 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
SLC3A2-214ENST00000539507 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
SLC3A2-214ENST00000539507 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
SLC3A2-214ENST00000539507 PRDM2Q13029 1718 aa12.53□□□□□ -0.4
SLC3A2-214ENST00000539507 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
SLC3A2-214ENST00000539507 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
SLC3A2-214ENST00000539507 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
SLC3A2-214ENST00000539507 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.413e-12■■■■□ 25.3
SLC3A2-214ENST00000539507 FBLN2P98095 1184 aa12.45□□□□□ -0.42
SLC3A2-214ENST00000539507 POLA1P09884 1462 aaPredicted RBP12.44□□□□□ -0.42
SLC3A2-214ENST00000539507 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
SLC3A2-214ENST00000539507 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
SLC3A2-214ENST00000539507 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
SLC3A2-214ENST00000539507 SOGA1O94964 1423 aa12.38□□□□□ -0.43
SLC3A2-214ENST00000539507 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
SLC3A2-214ENST00000539507 CHD1O14646 1710 aa12.37□□□□□ -0.43
SLC3A2-214ENST00000539507 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
SLC3A2-214ENST00000539507 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
SLC3A2-214ENST00000539507 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
SLC3A2-214ENST00000539507 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
SLC3A2-214ENST00000539507 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
SLC3A2-214ENST00000539507 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
SLC3A2-214ENST00000539507 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
SLC3A2-214ENST00000539507 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
SLC3A2-214ENST00000539507 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
SLC3A2-214ENST00000539507 SYNJ2O15056 1496 aa12.28□□□□□ -0.44
SLC3A2-214ENST00000539507 CUX1P39880 1505 aa12.27□□□□□ -0.45
SLC3A2-214ENST00000539507 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
SLC3A2-214ENST00000539507 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
SLC3A2-214ENST00000539507 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
SLC3A2-214ENST00000539507 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
SLC3A2-214ENST00000539507 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
SLC3A2-214ENST00000539507 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
SLC3A2-214ENST00000539507 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
SLC3A2-214ENST00000539507 NUP160Q12769 1436 aa12.11□□□□□ -0.47
SLC3A2-214ENST00000539507 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
SLC3A2-214ENST00000539507 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
SLC3A2-214ENST00000539507 CEP170Q5SW79 1584 aa12.08□□□□□ -0.48
SLC3A2-214ENST00000539507 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
SLC3A2-214ENST00000539507 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
SLC3A2-214ENST00000539507 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
SLC3A2-214ENST00000539507 SHROOM2Q13796 1616 aa12.02□□□□□ -0.49
SLC3A2-214ENST00000539507 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms