RNA–Protein interactions for RNA: ENST00000524496.5

RPL27A-202, Transcript of ribosomal protein L27a, humanhuman

TSL 3 BASIC

Gene RPL27A, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-202ENST00000524496 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
RPL27A-202ENST00000524496 ABCC9O60706 1549 aa33.21■■■□□ 2.91
RPL27A-202ENST00000524496 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
RPL27A-202ENST00000524496 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
RPL27A-202ENST00000524496 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
RPL27A-202ENST00000524496 NACADO15069 1562 aa31.27■■■□□ 2.6
RPL27A-202ENST00000524496 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
RPL27A-202ENST00000524496 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
RPL27A-202ENST00000524496 UNC13AQ9UPW8 1703 aa30.89■■■□□ 2.54
RPL27A-202ENST00000524496 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
RPL27A-202ENST00000524496 BICRAQ9NZM4 1560 aa30.74■■■□□ 2.51
RPL27A-202ENST00000524496 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
RPL27A-202ENST00000524496 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
RPL27A-202ENST00000524496 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
RPL27A-202ENST00000524496 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
RPL27A-202ENST00000524496 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
RPL27A-202ENST00000524496 EIF4G1Q04637 1599 aaKnown RBP29.9■■■□□ 2.38
RPL27A-202ENST00000524496 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
RPL27A-202ENST00000524496 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
RPL27A-202ENST00000524496 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
RPL27A-202ENST00000524496 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
RPL27A-202ENST00000524496 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
RPL27A-202ENST00000524496 HMGXB3Q12766 1538 aa28.69■■■□□ 2.18
RPL27A-202ENST00000524496 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
RPL27A-202ENST00000524496 NESP48681 1621 aa28.59■■■□□ 2.17
RPL27A-202ENST00000524496 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
RPL27A-202ENST00000524496 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
RPL27A-202ENST00000524496 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
RPL27A-202ENST00000524496 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
RPL27A-202ENST00000524496 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
RPL27A-202ENST00000524496 CUX2O14529 1486 aa28.49■■■□□ 2.15
RPL27A-202ENST00000524496 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
RPL27A-202ENST00000524496 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
RPL27A-202ENST00000524496 WIZO95785 1651 aa28.19■■■□□ 2.1
RPL27A-202ENST00000524496 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
RPL27A-202ENST00000524496 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
RPL27A-202ENST00000524496 PDS5BQ9NTI5 1447 aa28.03■■■□□ 2.08
RPL27A-202ENST00000524496 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
RPL27A-202ENST00000524496 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
RPL27A-202ENST00000524496 WDR62O43379 1518 aa27.81■■■□□ 2.04
RPL27A-202ENST00000524496 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
RPL27A-202ENST00000524496 CFTRP13569 1480 aa27.75■■■□□ 2.03
RPL27A-202ENST00000524496 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
RPL27A-202ENST00000524496 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
RPL27A-202ENST00000524496 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
RPL27A-202ENST00000524496 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
RPL27A-202ENST00000524496 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
RPL27A-202ENST00000524496 TRIM41Q8WV44 630 aa27.31■■□□□ 1.96
RPL27A-202ENST00000524496 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.96
RPL27A-202ENST00000524496 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
RPL27A-202ENST00000524496 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
RPL27A-202ENST00000524496 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
RPL27A-202ENST00000524496 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
RPL27A-202ENST00000524496 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
RPL27A-202ENST00000524496 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
RPL27A-202ENST00000524496 TARBP1Q13395 1621 aaKnown RBP27.01■■□□□ 1.92
RPL27A-202ENST00000524496 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.911e-7■■■■□ 22.9
RPL27A-202ENST00000524496 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
RPL27A-202ENST00000524496 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
RPL27A-202ENST00000524496 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
RPL27A-202ENST00000524496 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
RPL27A-202ENST00000524496 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
RPL27A-202ENST00000524496 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
RPL27A-202ENST00000524496 CHD1O14646 1710 aa26.82■■□□□ 1.88
RPL27A-202ENST00000524496 TDRD9Q8NDG6 1382 aaKnown RBP26.82■■□□□ 1.88
RPL27A-202ENST00000524496 CUX1P39880 1505 aa26.81■■□□□ 1.88
RPL27A-202ENST00000524496 SOGA1O94964 1423 aa26.81■■□□□ 1.88
RPL27A-202ENST00000524496 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
RPL27A-202ENST00000524496 FBLN2P98095 1184 aa26.72■■□□□ 1.87
RPL27A-202ENST00000524496 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
RPL27A-202ENST00000524496 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
RPL27A-202ENST00000524496 CYB5RLQ6IPT4 315 aa26.63■■□□□ 1.85
RPL27A-202ENST00000524496 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
RPL27A-202ENST00000524496 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
RPL27A-202ENST00000524496 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
RPL27A-202ENST00000524496 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
RPL27A-202ENST00000524496 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
RPL27A-202ENST00000524496 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
RPL27A-202ENST00000524496 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
RPL27A-202ENST00000524496 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
RPL27A-202ENST00000524496 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
RPL27A-202ENST00000524496 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
RPL27A-202ENST00000524496 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
RPL27A-202ENST00000524496 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
RPL27A-202ENST00000524496 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
RPL27A-202ENST00000524496 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
RPL27A-202ENST00000524496 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
RPL27A-202ENST00000524496 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
RPL27A-202ENST00000524496 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
RPL27A-202ENST00000524496 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
RPL27A-202ENST00000524496 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
RPL27A-202ENST00000524496 CEP170Q5SW79 1584 aa26.2■■□□□ 1.78
RPL27A-202ENST00000524496 NUP160Q12769 1436 aa26.16■■□□□ 1.78
RPL27A-202ENST00000524496 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
RPL27A-202ENST00000524496 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
RPL27A-202ENST00000524496 SHROOM2Q13796 1616 aa26.04■■□□□ 1.76
RPL27A-202ENST00000524496 PRG4Q92954 1404 aaPredicted RBP25.9■■□□□ 1.74
RPL27A-202ENST00000524496 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
RPL27A-202ENST00000524496 RUSC2Q8N2Y8 1516 aa25.87■■□□□ 1.73
RPL27A-202ENST00000524496 IGF1RP08069 1367 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms