RNA–Protein interactions for RNA: ENST00000567229.5

RPL4-214, Transcript of ribosomal protein L4, humanhuman

TSL 5

Gene RPL4, Length 2,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-214ENST00000567229 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
RPL4-214ENST00000567229 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
RPL4-214ENST00000567229 ABCC9O60706 1549 aa23.46■■□□□ 1.35
RPL4-214ENST00000567229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
RPL4-214ENST00000567229 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
RPL4-214ENST00000567229 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
RPL4-214ENST00000567229 NACADO15069 1562 aa22.78■■□□□ 1.24
RPL4-214ENST00000567229 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
RPL4-214ENST00000567229 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
RPL4-214ENST00000567229 SCRIBQ14160 1630 aa22.41■■□□□ 1.18
RPL4-214ENST00000567229 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
RPL4-214ENST00000567229 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
RPL4-214ENST00000567229 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
RPL4-214ENST00000567229 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
RPL4-214ENST00000567229 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
RPL4-214ENST00000567229 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
RPL4-214ENST00000567229 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
RPL4-214ENST00000567229 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
RPL4-214ENST00000567229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
RPL4-214ENST00000567229 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
RPL4-214ENST00000567229 WIZO95785 1651 aa21.26■□□□□ 0.99
RPL4-214ENST00000567229 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
RPL4-214ENST00000567229 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
RPL4-214ENST00000567229 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
RPL4-214ENST00000567229 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
RPL4-214ENST00000567229 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
RPL4-214ENST00000567229 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
RPL4-214ENST00000567229 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
RPL4-214ENST00000567229 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
RPL4-214ENST00000567229 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
RPL4-214ENST00000567229 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
RPL4-214ENST00000567229 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
RPL4-214ENST00000567229 NESP48681 1621 aa20.49■□□□□ 0.87
RPL4-214ENST00000567229 CFTRP13569 1480 aa20.46■□□□□ 0.87
RPL4-214ENST00000567229 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
RPL4-214ENST00000567229 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
RPL4-214ENST00000567229 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
RPL4-214ENST00000567229 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
RPL4-214ENST00000567229 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
RPL4-214ENST00000567229 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
RPL4-214ENST00000567229 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
RPL4-214ENST00000567229 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
RPL4-214ENST00000567229 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
RPL4-214ENST00000567229 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
RPL4-214ENST00000567229 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
RPL4-214ENST00000567229 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
RPL4-214ENST00000567229 CUX1P39880 1505 aa20.08■□□□□ 0.81
RPL4-214ENST00000567229 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
RPL4-214ENST00000567229 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
RPL4-214ENST00000567229 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
RPL4-214ENST00000567229 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
RPL4-214ENST00000567229 TOPBP1Q92547 1522 aa20■□□□□ 0.79
RPL4-214ENST00000567229 TOP2BQ02880 1626 aa20■□□□□ 0.79
RPL4-214ENST00000567229 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
RPL4-214ENST00000567229 WDR62O43379 1518 aa19.96■□□□□ 0.79
RPL4-214ENST00000567229 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
RPL4-214ENST00000567229 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
RPL4-214ENST00000567229 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
RPL4-214ENST00000567229 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
RPL4-214ENST00000567229 CUX2O14529 1486 aa19.81■□□□□ 0.76
RPL4-214ENST00000567229 SOGA1O94964 1423 aa19.76■□□□□ 0.75
RPL4-214ENST00000567229 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
RPL4-214ENST00000567229 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
RPL4-214ENST00000567229 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
RPL4-214ENST00000567229 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
RPL4-214ENST00000567229 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
RPL4-214ENST00000567229 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
RPL4-214ENST00000567229 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
RPL4-214ENST00000567229 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
RPL4-214ENST00000567229 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
RPL4-214ENST00000567229 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
RPL4-214ENST00000567229 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.731e-11■■■■■ 78.3
RPL4-214ENST00000567229 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
RPL4-214ENST00000567229 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
RPL4-214ENST00000567229 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
RPL4-214ENST00000567229 EEA1Q15075 1411 aa19.52■□□□□ 0.72
RPL4-214ENST00000567229 IGF1RP08069 1367 aa19.48■□□□□ 0.71
RPL4-214ENST00000567229 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
RPL4-214ENST00000567229 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
RPL4-214ENST00000567229 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
RPL4-214ENST00000567229 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
RPL4-214ENST00000567229 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
RPL4-214ENST00000567229 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
RPL4-214ENST00000567229 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
RPL4-214ENST00000567229 CUL7Q14999 1698 aa19.39■□□□□ 0.69
RPL4-214ENST00000567229 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
RPL4-214ENST00000567229 KIF21BO75037 1637 aa19.37■□□□□ 0.69
RPL4-214ENST00000567229 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
RPL4-214ENST00000567229 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
RPL4-214ENST00000567229 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.68
RPL4-214ENST00000567229 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
RPL4-214ENST00000567229 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
RPL4-214ENST00000567229 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
RPL4-214ENST00000567229 CHD1O14646 1710 aa19.25■□□□□ 0.67
RPL4-214ENST00000567229 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
RPL4-214ENST00000567229 FBLN2P98095 1184 aa19.22■□□□□ 0.67
RPL4-214ENST00000567229 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
RPL4-214ENST00000567229 CEP170Q5SW79 1584 aa19.17■□□□□ 0.66
RPL4-214ENST00000567229 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
RPL4-214ENST00000567229 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms