RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
SLC3A2-215ENST00000539891 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
SLC3A2-215ENST00000539891 ABCC9O60706 1549 aa23.26■■□□□ 1.31
SLC3A2-215ENST00000539891 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
SLC3A2-215ENST00000539891 NACADO15069 1562 aa22.33■■□□□ 1.17
SLC3A2-215ENST00000539891 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
SLC3A2-215ENST00000539891 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
SLC3A2-215ENST00000539891 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
SLC3A2-215ENST00000539891 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
SLC3A2-215ENST00000539891 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
SLC3A2-215ENST00000539891 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
SLC3A2-215ENST00000539891 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
SLC3A2-215ENST00000539891 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
SLC3A2-215ENST00000539891 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
SLC3A2-215ENST00000539891 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
SLC3A2-215ENST00000539891 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
SLC3A2-215ENST00000539891 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
SLC3A2-215ENST00000539891 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
SLC3A2-215ENST00000539891 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
SLC3A2-215ENST00000539891 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
SLC3A2-215ENST00000539891 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
SLC3A2-215ENST00000539891 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
SLC3A2-215ENST00000539891 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
SLC3A2-215ENST00000539891 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
SLC3A2-215ENST00000539891 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
SLC3A2-215ENST00000539891 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
SLC3A2-215ENST00000539891 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
SLC3A2-215ENST00000539891 WIZO95785 1651 aa20.26■□□□□ 0.83
SLC3A2-215ENST00000539891 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
SLC3A2-215ENST00000539891 NESP48681 1621 aa20.1■□□□□ 0.81
SLC3A2-215ENST00000539891 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
SLC3A2-215ENST00000539891 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
SLC3A2-215ENST00000539891 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
SLC3A2-215ENST00000539891 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
SLC3A2-215ENST00000539891 CUX2O14529 1486 aa19.95■□□□□ 0.78
SLC3A2-215ENST00000539891 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
SLC3A2-215ENST00000539891 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
SLC3A2-215ENST00000539891 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
SLC3A2-215ENST00000539891 CFTRP13569 1480 aa19.83■□□□□ 0.76
SLC3A2-215ENST00000539891 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
SLC3A2-215ENST00000539891 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
SLC3A2-215ENST00000539891 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
SLC3A2-215ENST00000539891 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SLC3A2-215ENST00000539891 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
SLC3A2-215ENST00000539891 WDR62O43379 1518 aa19.69■□□□□ 0.74
SLC3A2-215ENST00000539891 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
SLC3A2-215ENST00000539891 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
SLC3A2-215ENST00000539891 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
SLC3A2-215ENST00000539891 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
SLC3A2-215ENST00000539891 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
SLC3A2-215ENST00000539891 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
SLC3A2-215ENST00000539891 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
SLC3A2-215ENST00000539891 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
SLC3A2-215ENST00000539891 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
SLC3A2-215ENST00000539891 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
SLC3A2-215ENST00000539891 CUX1P39880 1505 aa19.21■□□□□ 0.67
SLC3A2-215ENST00000539891 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
SLC3A2-215ENST00000539891 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
SLC3A2-215ENST00000539891 SOGA1O94964 1423 aa19.14■□□□□ 0.65
SLC3A2-215ENST00000539891 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SLC3A2-215ENST00000539891 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
SLC3A2-215ENST00000539891 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.659e-10■■■■■ 27.5
SLC3A2-215ENST00000539891 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
SLC3A2-215ENST00000539891 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
SLC3A2-215ENST00000539891 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
SLC3A2-215ENST00000539891 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
SLC3A2-215ENST00000539891 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
SLC3A2-215ENST00000539891 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
SLC3A2-215ENST00000539891 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
SLC3A2-215ENST00000539891 CHD1O14646 1710 aa18.98■□□□□ 0.63
SLC3A2-215ENST00000539891 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
SLC3A2-215ENST00000539891 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
SLC3A2-215ENST00000539891 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
SLC3A2-215ENST00000539891 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
SLC3A2-215ENST00000539891 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
SLC3A2-215ENST00000539891 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
SLC3A2-215ENST00000539891 FBLN2P98095 1184 aa18.85■□□□□ 0.61
SLC3A2-215ENST00000539891 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SLC3A2-215ENST00000539891 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
SLC3A2-215ENST00000539891 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
SLC3A2-215ENST00000539891 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
SLC3A2-215ENST00000539891 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
SLC3A2-215ENST00000539891 ARHGEF11O15085 1522 aa18.77■□□□□ 0.6
SLC3A2-215ENST00000539891 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
SLC3A2-215ENST00000539891 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
SLC3A2-215ENST00000539891 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
SLC3A2-215ENST00000539891 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
SLC3A2-215ENST00000539891 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
SLC3A2-215ENST00000539891 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
SLC3A2-215ENST00000539891 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
SLC3A2-215ENST00000539891 NUP160Q12769 1436 aa18.64■□□□□ 0.57
SLC3A2-215ENST00000539891 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
SLC3A2-215ENST00000539891 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
SLC3A2-215ENST00000539891 IGF1RP08069 1367 aa18.6■□□□□ 0.57
SLC3A2-215ENST00000539891 CUL7Q14999 1698 aa18.59■□□□□ 0.57
SLC3A2-215ENST00000539891 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
SLC3A2-215ENST00000539891 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
SLC3A2-215ENST00000539891 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
SLC3A2-215ENST00000539891 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
SLC3A2-215ENST00000539891 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms