Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC11.33□□□□□ -0.62e-6■■■□□ 19.1
DKC1O60832 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC11.24□□□□□ -0.612e-6■■■□□ 19.1
DKC1O60832 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC9.01□□□□□ -0.975e-15■■■□□ 19.1
DKC1O60832 SNORD45B-201ENST00000364617 72 ntBASIC-1.11□□□□□ -2.591e-323■■■□□ 19.1
DKC1O60832 UBE2E1-207ENST00000475680 1138 ntTSL 523.3■■□□□ 1.325e-6■■■□□ 19
DKC1O60832 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.025e-6■■■□□ 19
DKC1O60832 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.49■□□□□ 0.875e-6■■■□□ 19
DKC1O60832 UBE2E1-211ENST00000495141 582 ntTSL 218.24■□□□□ 0.515e-6■■■□□ 19
DKC1O60832 UBE2E1-204ENST00000442670 622 ntTSL 217.78■□□□□ 0.445e-6■■■□□ 19
DKC1O60832 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC10.41□□□□□ -0.745e-6■■■□□ 19
DKC1O60832 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC10.41□□□□□ -0.745e-6■■■□□ 19
DKC1O60832 UBE2E1-205ENST00000452012 1166 ntTSL 37.04□□□□□ -1.285e-6■■■□□ 19
DKC1O60832 SNHG1-215ENST00000540904 594 ntTSL 510.35□□□□□ -0.756e-36■■■□□ 19
DKC1O60832 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.86■□□□□ 0.935e-7■■■□□ 19
DKC1O60832 PLCB1-224ENST00000636319 2930 ntTSL 519.48■□□□□ 0.715e-7■■■□□ 19
DKC1O60832 PLCB1-214ENST00000626161 706 ntTSL 518.37■□□□□ 0.535e-7■■■□□ 19
DKC1O60832 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.55e-7■■■□□ 19
DKC1O60832 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.19■□□□□ 0.55e-7■■■□□ 19
DKC1O60832 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.04■□□□□ -05e-7■■■□□ 19
DKC1O60832 PLCB1-219ENST00000630495 759 ntTSL 59.01□□□□□ -0.975e-7■■■□□ 19
DKC1O60832 PLCB1-212ENST00000625874 3206 ntTSL 28.14□□□□□ -1.115e-7■■■□□ 19
DKC1O60832 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.5□□□□□ -1.215e-7■■■□□ 19
DKC1O60832 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.72□□□□□ -1.655e-7■■■□□ 19
DKC1O60832 TCF12-222ENST00000561152 675 ntTSL 528.99■■■□□ 2.234e-21■■■□□ 19
DKC1O60832 TCF12-208ENST00000557947 575 ntTSL 424.42■■□□□ 1.54e-21■■■□□ 19
DKC1O60832 TCF12-210ENST00000558908 553 ntTSL 421.09■□□□□ 0.974e-21■■■□□ 19
DKC1O60832 APOL1-207ENST00000427990 624 ntTSL 313.02□□□□□ -0.333e-17■■■□□ 19
DKC1O60832 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.653e-17■■■□□ 19
DKC1O60832 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.773e-17■■■□□ 19
DKC1O60832 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.813e-17■■■□□ 19
DKC1O60832 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.893e-17■■■□□ 19
DKC1O60832 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.93e-17■■■□□ 19
DKC1O60832 RPL12-204ENST00000497825 864 ntTSL 219.73■□□□□ 0.751e-323■■■□□ 18.9
DKC1O60832 RPL12-203ENST00000497322 2275 ntTSL 217.27■□□□□ 0.351e-323■■■□□ 18.9
DKC1O60832 SNORA65-201ENST00000364432 130 ntBASIC12.71□□□□□ -0.371e-323■■■□□ 18.9
DKC1O60832 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.7□□□□□ -0.381e-323■■■□□ 18.9
DKC1O60832 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.981e-323■■■□□ 18.9
DKC1O60832 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.316e-11■■■□□ 18.9
DKC1O60832 CHRNB1-204ENST00000572857 539 ntTSL 423.31■■□□□ 1.327e-14■■■□□ 18.8
DKC1O60832 CARHSP1-206ENST00000563815 1913 ntTSL 221.46■■□□□ 1.037e-14■■■□□ 18.8
DKC1O60832 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.71■□□□□ 0.757e-14■■■□□ 18.8
DKC1O60832 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.727e-14■■■□□ 18.8
DKC1O60832 CHRNB1-203ENST00000570557 947 ntTSL 514.54□□□□□ -0.087e-14■■■□□ 18.8
DKC1O60832 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC12.11□□□□□ -0.477e-14■■■□□ 18.8
DKC1O60832 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC11.28□□□□□ -0.67e-14■■■□□ 18.8
DKC1O60832 CHRNB1-205ENST00000573209 2394 ntTSL 211.1□□□□□ -0.637e-14■■■□□ 18.8
DKC1O60832 USP34-204ENST00000453133 1409 ntTSL 55.07□□□□□ -1.69e-8■■■□□ 18.8
DKC1O60832 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.019e-8■■■□□ 18.8
DKC1O60832 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC10.14□□□□□ -0.799e-8■■■□□ 18.8
DKC1O60832 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.636e-8■■■□□ 18.7
DKC1O60832 ARHGEF10L-206ENST00000469726 4585 ntTSL 214.52□□□□□ -0.082e-6■■■□□ 18.7
DKC1O60832 ARHGEF10L-201ENST00000167825 3018 ntTSL 214.47□□□□□ -0.092e-6■■■□□ 18.7
DKC1O60832 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■■□□ 18.7
DKC1O60832 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.92□□□□□ -0.342e-6■■■□□ 18.7
DKC1O60832 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.542e-6■■■□□ 18.7
DKC1O60832 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.25■□□□□ 0.037e-50■■■□□ 18.7
DKC1O60832 LYRM4-204ENST00000463032 1487 ntTSL 1 (best)15.08■□□□□ 0.017e-50■■■□□ 18.7
DKC1O60832 LYRM4-203ENST00000458438 941 ntTSL 214.33□□□□□ -0.127e-50■■■□□ 18.7
DKC1O60832 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.64□□□□□ -0.237e-50■■■□□ 18.7
DKC1O60832 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.857e-50■■■□□ 18.7
DKC1O60832 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.626e-8■■■□□ 18.6
DKC1O60832 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.166e-8■■■□□ 18.6
DKC1O60832 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.116e-8■■■□□ 18.6
DKC1O60832 R3HDM1-215ENST00000483021 539 ntTSL 321.89■■□□□ 1.091e-20■■■□□ 18.6
DKC1O60832 TEX264-206ENST00000419358 531 ntAPPRIS ALT2 TSL 216.31■□□□□ 0.21e-10■■■□□ 18.6
DKC1O60832 R3HDM1-213ENST00000463230 2241 ntTSL 214.73□□□□□ -0.051e-20■■■□□ 18.6
DKC1O60832 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.741e-10■■■□□ 18.6
DKC1O60832 R3HDM1-208ENST00000438014 582 ntTSL 59.16□□□□□ -0.941e-20■■■□□ 18.6
DKC1O60832 USP34-207ENST00000463046 6307 ntTSL 27.18□□□□□ -1.261e-10■■■□□ 18.6
DKC1O60832 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.13□□□□□ -1.431e-20■■■□□ 18.6
DKC1O60832 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.51e-20■■■□□ 18.6
DKC1O60832 USP34-211ENST00000472706 556 ntTSL 45.31□□□□□ -1.561e-10■■■□□ 18.6
DKC1O60832 USP34-205ENST00000453734 2708 ntTSL 1 (best)2.78□□□□□ -1.961e-10■■■□□ 18.6
DKC1O60832 R3HDM1-219ENST00000488035 502 ntTSL 32.69□□□□□ -1.981e-20■■■□□ 18.6
DKC1O60832 PVT1-208ENST00000519481 542 ntTSL 212.23□□□□□ -0.452e-8■■■□□ 18.6
DKC1O60832 PVT1-206ENST00000517838 518 ntTSL 27.95□□□□□ -1.142e-8■■■□□ 18.6
DKC1O60832 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.749e-12■■■□□ 18.5
DKC1O60832 C19orf48-216ENST00000641834 1718 nt18.83■□□□□ 0.619e-12■■■□□ 18.5
DKC1O60832 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.389e-12■■■□□ 18.5
DKC1O60832 C19orf48-203ENST00000593287 578 ntTSL 515.6■□□□□ 0.099e-12■■■□□ 18.5
DKC1O60832 C19orf48-210ENST00000598463 1844 ntTSL 1 (best)14.96□□□□□ -0.019e-12■■■□□ 18.5
DKC1O60832 C19orf48-206ENST00000596554 727 ntTSL 314.54□□□□□ -0.089e-12■■■□□ 18.5
DKC1O60832 C19orf48-209ENST00000597705 892 ntTSL 314.28□□□□□ -0.129e-12■■■□□ 18.5
DKC1O60832 C19orf48-208ENST00000597493 971 ntTSL 213.95□□□□□ -0.189e-12■■■□□ 18.5
DKC1O60832 C19orf48-213ENST00000601267 782 ntTSL 213.63□□□□□ -0.239e-12■■■□□ 18.5
DKC1O60832 C19orf48-211ENST00000599004 866 ntTSL 513.21□□□□□ -0.299e-12■■■□□ 18.5
DKC1O60832 C19orf48-204ENST00000595794 941 ntTSL 1 (best)12.17□□□□□ -0.469e-12■■■□□ 18.5
DKC1O60832 TSC2-215ENST00000490108 482 ntTSL 422.4■■□□□ 1.182e-6■■■□□ 18.5
DKC1O60832 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.572e-6■■■□□ 18.5
DKC1O60832 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.562e-6■■■□□ 18.5
DKC1O60832 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.522e-6■■■□□ 18.5
DKC1O60832 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.492e-6■■■□□ 18.5
DKC1O60832 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.432e-6■■■□□ 18.5
DKC1O60832 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.292e-6■■■□□ 18.5
DKC1O60832 TSC2-206ENST00000439117 5073 ntTSL 1 (best)16.4■□□□□ 0.222e-6■■■□□ 18.5
DKC1O60832 TSC2-220ENST00000568238 422 ntTSL 314.43□□□□□ -0.12e-6■■■□□ 18.5
DKC1O60832 TSC2-223ENST00000568566 542 ntTSL 39.23□□□□□ -0.932e-6■■■□□ 18.5
DKC1O60832 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.015e-6■■■□□ 18.4
DKC1O60832 ZDHHC18-204ENST00000488397 1275 ntTSL 215.06■□□□□ 05e-6■■■□□ 18.4
DKC1O60832 NDRG1-224ENST00000522738 530 ntTSL 512.66□□□□□ -0.383e-10■■■□□ 18.4
Retrieved 100 of 8,567 protein–RNA pairs in 63.6 ms